Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold147G36350 Striga asiatica HOM05D005427 ORTHO05D006461 1.9e-150 535.8 263 100.0
SGA_v2.0_scaffold4G02171 Striga asiatica HOM05D005427 ORTHO05D006461 1.1e-110 403.7 209 95.2
SGA_v2.0_scaffold70G23436 Striga asiatica HOM05D005427 ORTHO05D006461 4.5e-80 302.0 224 70.1
Migut.F01758 Erythranthe guttata HOM05D005427 ORTHO05D006461 2.8e-61 239.6 226 56.6
GSVIVG01017423001 Vitis vinifera HOM05D005427 ORTHO05D006461 7.8e-56 221.5 225 50.2
CSS0026502 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 5.6e-54 215.3 222 50.9
Dinv36993 Davidia involucrata HOM05D005427 ORTHO05D006461 8.0e-53 211.5 219 50.2
CSS0032221 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 7.5e-51 204.9 224 46.9
TAR628G1492 Trochodendron aralioides HOM05D001631 ORTHO05D001591 1.7e-50 203.8 237 44.7
QL06p037683 Quercus lobata HOM05D005427 ORTHO05D006461 3.7e-50 202.6 221 48.0
CSS0024088 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 6.4e-50 201.8 224 46.4
Potri.017G091300 Populus trichocarpa HOM05D005427 ORTHO05D006461 1.9e-49 200.3 225 44.4
Ciclev10026408m.g Citrus clementina HOM05D005427 ORTHO05D006461 3.5e-48 196.1 221 46.6
Sopen09g003480 Solanum pennellii HOM05D005427 ORTHO05D006461 1.0e-47 194.5 223 46.2
Solyc09g008680.4 Solanum lycopersicum HOM05D005427 ORTHO05D006461 1.3e-47 194.1 223 45.7
TWI74G0676 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.7e-47 193.7 221 44.8
Atru.chr3.1127 Acer truncatum HOM05D005427 ORTHO05D006461 2.3e-47 193.4 221 47.1
Atru.chr3.1136 Acer truncatum HOM05D005427 ORTHO05D006461 2.3e-47 193.4 221 47.1
Dinv21205 Davidia involucrata HOM05D005427 ORTHO05D006461 3.9e-47 192.6 206 51.9
PGSC0003DMG400012980 Solanum tuberosum HOM05D005427 ORTHO05D006461 5.0e-47 192.2 220 46.4
Prupe.6G211100 Prunus persica HOM05D005427 ORTHO05D006461 2.5e-46 189.9 218 44.5
Rhsim07G0122400 Rhododendron simsii HOM05D005427 ORTHO05D006461 3.3e-46 189.5 235 43.4
CAN.G1830.8 Capsicum annuum HOM05D005427 ORTHO05D006461 1.6e-45 187.2 223 45.7
Thecc.01G082100 Theobroma cacao HOM05D005427 ORTHO05D006461 1.6e-45 187.2 221 45.2
FvH4_1g18830 Fragaria vesca HOM05D005427 ORTHO05D006461 2.1e-45 186.8 220 42.7
PGR102G2470 Punica granatum HOM05D005427 ORTHO05D006461 4.7e-45 185.7 231 42.9
RcHm_v2.0_Chr2g0109701 Rosa chinensis HOM05D005427 ORTHO05D006461 4.7e-45 185.7 218 44.5
Aqoxy3G03178 Aquilegia oxysepala HOM05D005427 ORTHO05D006461 8.1e-45 184.9 211 46.9
ClCG09G016510 Citrullus lanatus HOM05D005427 ORTHO05D006461 8.1e-45 184.9 211 44.5
Gohir.A11G206966 Gossypium hirsutum HOM05D005427 ORTHO05D006461 1.1e-44 184.5 221 47.5
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 1.1e-44 184.5 226 43.4
Nn1g05775 Nelumbo nucifera HOM05D005427 ORTHO05D006461 5.2e-44 182.2 222 43.7
COL.COLO4_11665 Corchorus olitorius HOM05D005427 ORTHO05D006461 2.0e-43 180.3 219 44.3
CiPaw.08G147100 Carya illinoinensis HOM05D005427 ORTHO05D006461 4.4e-43 179.1 222 41.4
Gorai.007G232600 Gossypium raimondii HOM05D005427 ORTHO05D006461 4.4e-43 179.1 221 46.6
FAN23G0196 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.7e-42 177.2 230 40.4
ECA233G5189 Erigeron canadensis HOM05D005427 ORTHO05D006461 3.7e-42 176.0 214 44.4
TAR376G0349 Trochodendron aralioides HOM05D005427 ORTHO05D006461 8.3e-42 174.9 215 41.9
Sed0018601 Sechium edule HOM05D005427 ORTHO05D006461 1.9e-41 173.7 212 41.5
Lj3g0020172 Lotus japonicus HOM05D005427 ORTHO05D006461 2.4e-41 173.3 230 41.3
Manes.13G105100 Manihot esculenta HOM05D005427 ORTHO05D006461 2.4e-41 173.3 214 42.1
Cfa001616 Carpinus fangiana HOM05D005427 ORTHO05D006461 4.1e-41 172.6 231 42.0
MELO3C018556.2 Cucumis melo HOM05D005427 ORTHO05D006461 4.1e-41 172.6 215 41.9
Lalb_Chr04g0263231 Lupinus albus HOM05D005427 ORTHO05D006461 4.1e-41 172.6 214 44.9
CsaV3_7G007450 Cucumis sativus L. HOM05D005427 ORTHO05D006461 7.1e-41 171.8 215 41.4
THA.LOC104819282 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 3.5e-40 169.5 219 40.2
vmacro07282 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 4.6e-40 169.1 210 46.7
HanXRQChr12g0368771 Helianthus annuus HOM05D005427 ORTHO05D006461 1.7e-39 167.2 207 43.0
DCAR_006436 Daucus carota HOM05D005427 ORTHO05D006461 2.3e-39 166.8 213 45.1
Eucgr.H02348 Eucalyptus grandis HOM05D005427 ORTHO05D006461 8.6e-39 164.9 229 39.3
RcHm_v2.0_Chr5g0054161 Rosa chinensis HOM05D005427 ORTHO05D006461 1.1e-38 164.5 218 41.7
FAN19G1732 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.9e-38 163.7 249 36.9
AT3G49645 Arabidopsis thaliana HOM05D005427 ORTHO05D006461 2.5e-38 163.3 231 41.1
Nitab4.5_0004281g0090 Nicotiana tabacum HOM05D005427 ORTHO05D006461 2.5e-38 163.3 213 41.8
AUR62041740 Chenopodium quinoa HOM05D005427 ORTHO05D006461 3.3e-38 162.9 201 45.8
Gohir.D11G216500 Gossypium hirsutum HOM05D005427 ORTHO05D006461 3.3e-38 162.9 207 45.9
Phvul.003G285200 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 4.3e-38 162.5 221 40.3
CANSAT01G2304 Cannabis sativa HOM05D005427 ORTHO05D006461 9.5e-38 161.4 221 40.3
AL7G47510 Arabidopsis lyrata HOM05D005427 ORTHO05D006461 2.8e-37 159.8 227 41.0
Carub.0005s1599 Capsella rubella HOM05D005427 ORTHO05D006461 3.6e-37 159.5 214 40.7
Ah.01g015840 Amaranthus hybridus HOM05D005427 ORTHO05D006461 4.7e-37 159.1 222 41.0
Phvul.003G285800 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 6.2e-37 158.7 222 38.7
Cpa.g.sc3.369 Carica papaya HOM05D005427 ORTHO05D006461 1.1e-36 157.9 219 40.6
AUR62024067 Chenopodium quinoa HOM05D005427 ORTHO05D006461 2.4e-36 156.8 201 43.3
Thhalv10019696m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 3.1e-36 156.4 220 41.8
Glyma.08G273000 Glycine max HOM05D005427 ORTHO05D006461 3.1e-36 156.4 223 40.4
Thhalv10010700m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 4.0e-36 156.0 219 41.6
Hund15020 Selenicereus undatus HOM05D005427 ORTHO05D006461 4.0e-36 156.0 238 37.4
EL10Ac9g20957 Beta vulgaris HOM05D005427 ORTHO05D006461 6.8e-36 155.2 199 43.7
Sc06g0009050 Simmondsia chinensis HOM05D005427 ORTHO05D006461 8.9e-36 154.8 185 43.2
AUR62019836 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.2e-35 154.5 199 42.7
THA.LOC104799739 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 1.5e-35 154.1 227 38.3
Hund13132 Selenicereus undatus HOM05D005427 ORTHO05D006461 3.4e-35 152.9 203 40.9
PSO761G0697 Papaver somniferum HOM05D005427 ORTHO05D006461 2.9e-34 149.8 220 35.9
TPR.G15264 Trifolium pratense HOM05D005427 ORTHO05D006461 2.9e-34 149.8 233 39.5
Duzib264G0001 Durio zibethinus HOM05D005427 ORTHO05D006461 4.9e-34 149.1 179 44.1
Sp5g12450 Schrenkiella parvula HOM05D005427 ORTHO05D006461 4.9e-34 149.1 219 38.8
AUR62012052 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.1e-33 147.9 200 43.0
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 1.4e-33 147.5 224 36.2
Peaxi162Scf00500g00116 Petunia axillaris HOM05D005427 ORTHO05D006461 2.4e-33 146.7 199 40.7
vmacro05473 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 5.4e-33 145.6 256 36.7
CARHR158680 Cardamine hirsuta HOM05D005427 ORTHO05D006461 9.2e-33 144.8 217 39.6
BraA07t29893Z Brassica rapa HOM05D005427 ORTHO05D006461 1.2e-32 144.4 236 36.9
BcaB01g00686 Brassica carinata HOM05D005427 ORTHO05D006461 4.6e-32 142.5 216 37.0
Psat4g120800 Pisum sativum HOM05D005427 ORTHO05D006461 4.6e-32 142.5 245 36.7
A06p28350 Brassica napus HOM05D005427 ORTHO05D006461 7.8e-32 141.7 235 36.2
C03p65440 Brassica napus HOM05D005427 ORTHO05D006461 7.8e-32 141.7 235 35.7
BolC3t18796H Brassica oleracea HOM05D005427 ORTHO05D006461 7.8e-32 141.7 235 35.7
BraA06t25777Z Brassica rapa HOM05D005427 ORTHO05D006461 7.8e-32 141.7 235 36.2
Ah.01g003640 Amaranthus hybridus HOM05D000109 ORTHO05D000520 1.7e-31 140.6 200 38.5
Aa31LG4G18120 Aethionema arabicum HOM05D005427 ORTHO05D006461 2.3e-31 140.2 220 35.5
BcaC01g02424 Brassica carinata HOM05D005427 ORTHO05D006461 3.9e-31 139.4 218 36.2
AL5G29490 Arabidopsis lyrata HOM05D007023 ORTHO05D008684 5.1e-31 139.0 209 39.2
BcaC07g39428 Brassica carinata HOM05D005427 ORTHO05D006461 8.7e-31 138.3 214 36.9
Hund00873 Selenicereus undatus HOM05D005427 ORTHO05D006461 8.7e-31 138.3 192 40.6
Hma1.2p1_0561F.1_g178960 Hydrangea macrophylla HOM05D005427 ORTHO05D006461 1.5e-30 137.5 113 61.1
Peaxi162Scf01051g00142 Petunia axillaris HOM05D005427 ORTHO05D006461 4.3e-30 136.0 223 40.4
Glyma.20G162400 Glycine max HOM05D005427 ORTHO05D006461 2.1e-29 133.7 201 38.8
A07p22100 Brassica napus HOM05D005427 ORTHO05D006461 6.2e-29 132.1 256 34.0
Zm00001eb210960 Zea mays HOM05D005427 ORTHO05D006461 8.1e-29 131.7 218 33.9
PSO210G5957 Papaver somniferum HOM05D005427 ORTHO05D006461 1.8e-28 130.6 206 35.4
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 2.4e-28 130.2 240 35.8
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 4.0e-28 129.4 242 35.1
MD01G1046300 Malus domestica HOM05D005427 ORTHO05D006461 5.2e-28 129.0 178 39.3
Os10g0360900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 1.5e-27 127.5 217 31.8
Haze_16903 Corylus avellana HOM05D005427 ORTHO05D006461 9.9e-27 124.8 229 37.1
Lsat_1_v5_gn_8_18901 Lactuca sativa HOM05D005427 ORTHO05D006461 2.9e-26 123.2 224 35.7
BraA06t24896Z Brassica rapa HOM05D007023 ORTHO05D008684 4.9e-26 122.5 221 33.9
BolC8t50081H Brassica oleracea HOM05D007023 ORTHO05D008684 6.4e-26 122.1 212 35.8
HPP92_024834 Vanilla planifolia HOM05D005427 ORTHO05D006461 1.1e-25 121.3 228 29.8
HPP92_026626 Vanilla planifolia HOM05D005427 ORTHO05D006461 1.1e-25 121.3 228 29.8
Medtr8g067265 Medicago truncatula HOM05D005427 ORTHO05D006461 1.4e-25 120.9 219 33.8
C08p24660 Brassica napus HOM05D007023 ORTHO05D008684 1.9e-25 120.6 200 36.5
FAN27G1155 Fragaria x ananassa HOM05D005427 ORTHO05D006461 3.2e-25 119.8 233 32.6
Phvul.002G065300 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 3.2e-25 119.8 176 37.5
TWI77G0140 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 9.3e-25 118.2 116 47.4
Zm00001eb064010 Zea mays HOM05D005427 ORTHO05D006461 1.6e-24 117.5 239 31.0
BcaB02g09598 Brassica carinata HOM05D005427 ORTHO05D006461 2.1e-24 117.1 207 36.7
A06p18060 Brassica napus HOM05D007023 ORTHO05D008684 2.5e-22 110.2 190 35.3
Cc09_g03000 Coffea canephora HOM05D005427 ORTHO05D006461 3.3e-22 109.8 131 48.1
FAN26G2664 Fragaria x ananassa HOM05D005427 ORTHO05D006461 3.3e-22 109.8 218 31.7
Pp3c24_9930 Physcomitrium patens HOM05D005427 ORTHO05D006461 3.3e-22 109.8 223 30.5
Sabra17G0080400 Salix brachista HOM05D005427 ORTHO05D006461 3.3e-22 109.8 195 33.8
Os07g0264900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 8.1e-21 105.1 180 33.3
SalBow7G4264 Salvia bowleyana HOM05D005427 ORTHO05D006461 8.1e-21 105.1 110 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2937 Anthoceros agrestis HOM05D005427 ORTHO05D006461 1.4e-20 104.4 207 30.4
VMungo1309G2225 Vigna mungo HOM05D005427 ORTHO05D006461 3.1e-20 103.2 121 45.5
EL10Ac6g13479 Beta vulgaris HOM05D005427 ORTHO05D006461 9.0e-20 101.7 166 36.1
SMO367G1008 Selaginella moellendorffii HOM05D005427 ORTHO05D006461 1.7e-18 97.4 166 34.9
Nitab4.5_0006709g0040 Nicotiana tabacum HOM05D005427 ORTHO05D006461 2.9e-18 96.7 83 51.8
MSTRG.375 Avicennia marina HOM05D005427 ORTHO05D006461 9.3e-17 91.7 96 51.0
Cc09_g02990 Coffea canephora HOM05D005427 ORTHO05D006461 4.6e-16 89.4 99 45.5
CSS0003252 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 6.7e-15 85.5 70 58.6
Rhsim10G0082400 Rhododendron simsii HOM05D005427 ORTHO05D006461 7.4e-14 82.0 67 55.2
Carub.0005s0959 Capsella rubella HOM05D005427 ORTHO05D006461 1.8e-12 77.4 65 55.4
Ah.16g109230 Amaranthus hybridus HOM05D005427 ORTHO05D006461 4.0e-12 76.3 105 38.1
MD00G1139600 Malus domestica HOM05D005427 ORTHO05D006461 1.5e-11 74.3 57 59.6
MD04G1240700 Malus domestica HOM05D005427 ORTHO05D006461 1.5e-11 74.3 57 59.6
MBI16_g26727_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 2.6e-11 73.6 66 48.5
Actinidia11934 Actinidia chinensis HOM05D005427 ORTHO05D006461 1.7e-10 70.9 95 45.3
SEGI_00262 Sequoiadendron giganteum HOM05D005427 ORTHO05D006461 2.9e-10 70.1 63 52.4
AagrBONN_evm.TU.Sc2ySwM_344.3300 Anthoceros agrestis HOM05D005427 ORTHO05D006461 5.1e-07 59.3 124 30.6


User provided reference genes

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