Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 4.7e-70 268.5 224 100.0
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 4.7e-70 268.5 224 100.0
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 2.1e-49 199.9 103 92.2
SGA_v2.0_scaffold470G52074 Striga asiatica HOM05D013095 ORTHO05D399408 6.2e-38 161.8 176 99.4
SGA_v2.0_scaffold708G53494 Striga asiatica HOM05D013095 ORTHO05D404610 2.5e-31 139.8 216 43.1
SGA_v2.0_scaffold189G40360 Striga asiatica HOM05D013095 ORTHO05D402649 1.3e-30 137.5 217 61.3
SGA_v2.0_scaffold563G52931 Striga asiatica HOM05D013095 ORTHO05D404637 1.2e-28 131.0 218 42.2
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 5.5e-18 95.5 103 47.6
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 1.8e-16 90.5 89 48.3
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 5.1e-16 89.0 81 55.6
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 5.1e-16 89.0 81 55.6
SGA_v2.0_scaffold76G25100 Striga asiatica HOM05D013095 ORTHO05D402094 5.1e-16 89.0 217 35.5
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 1.1e-15 87.8 81 54.3
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 1.5e-15 87.4 79 55.7
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 2.5e-15 86.7 103 44.7
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 9.7e-15 84.7 91 49.5
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 1.3e-14 84.3 115 41.7
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 1.3e-14 84.3 81 51.9
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 8.2e-14 81.6 81 53.1
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 4.1e-13 79.3 107 40.2
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 6.9e-13 78.6 100 40.0
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 9.0e-13 78.2 106 38.7
SGA_v2.0_scaffold139G35420 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-12 77.8 60 56.7
SGA_v2.0_scaffold14G06988 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-12 77.8 60 56.7
SGA_v2.0_scaffold223G42854 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-12 77.8 60 56.7
SGA_v2.0_scaffold22G09774 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-12 77.8 60 56.7
SGA_v2.0_scaffold332G48976 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-12 77.8 60 56.7
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 3.4e-12 76.3 106 38.7
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 3.8e-11 72.8 106 36.8
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 3.8e-11 72.8 71 54.9
SGA_v2.0_scaffold498G52478 Striga asiatica HOM05D013095 ORTHO05D400730 4.2e-10 69.3 142 36.6
SGA_v2.0_scaffold65G22226 Striga asiatica HOM05D013095 ORTHO05D406121 9.4e-10 68.2 144 65.3
SGA_v2.0_scaffold64G21978 Striga asiatica HOM05D013095 ORTHO05D402193 3.0e-08 63.2 34 94.1
SalBow1G0866 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.7e-08 62.0 70 42.9
SalBow7G0377 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.7e-08 62.0 70 42.9
SalBow7G0744 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.7e-08 62.0 70 42.9
SalBow7G3697 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.7e-08 62.0 70 42.9
SalBow8G4000 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.7e-08 62.0 70 42.9
SalBow1G0137 Salvia bowleyana HOM05D008808 ORTHO05D009453 8.8e-08 61.6 70 41.4
SalBow5G1275 Salvia bowleyana HOM05D008808 ORTHO05D009453 8.8e-08 61.6 70 42.9
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 5.7e-07 58.9 92 39.1
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 9.7e-07 58.2 60 55.0
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 9.7e-07 58.2 60 55.0
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 1.3e-06 57.8 59 49.2
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 1.3e-06 57.8 59 49.2
SalBow6G3220 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.3e-06 57.8 70 41.4
SalBow1G2331 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.7e-06 57.4 70 41.4
SalBow4G2815 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.7e-06 57.4 70 41.4
SalBow7G0742 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.7e-06 57.4 102 34.3
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 2.2e-06 57.0 59 47.5
SalBow4G1975 Salvia bowleyana HOM05D027806 ORTHO05D009453 2.8e-06 56.6 91 34.1
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 4.8e-06 55.8 58 48.3


User provided reference genes

Program Settings