Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 1.4e-120 436.4 244 100.0
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 3.2e-19 99.8 110 53.6
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.0e-17 94.7 111 53.2
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 2.3e-17 93.6 109 67.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 3.9e-17 92.8 141 45.4
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 4.3e-16 89.4 68 70.6
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.1e-15 87.0 110 67.3
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.1e-15 87.0 110 67.3
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 1.4e-14 84.3 109 66.1
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 6.8e-14 82.0 95 51.6
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 6.8e-14 82.0 108 66.7
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 2.0e-13 80.5 110 65.5
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 2.6e-13 80.1 110 65.5
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 3.4e-13 79.7 75 61.3
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 3.4e-13 79.7 106 64.2
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 4.4e-13 79.3 65 69.2
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 9.9e-13 78.2 94 48.9
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 9.9e-13 78.2 94 48.9
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 9.9e-13 78.2 109 65.1
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 4.9e-12 75.9 76 59.2
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 8.3e-12 75.1 110 63.6
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.9e-11 73.9 109 64.2
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 3.2e-11 73.2 109 62.4
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 4.1e-11 72.8 82 76.8
HPP92_017216 Vanilla planifolia HOM05D006719 ORTHO05D007063 4.1e-11 72.8 92 58.7
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 7.1e-11 72.0 137 54.7
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 7.1e-11 72.0 138 55.1
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 7.1e-11 72.0 61 65.6
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 7.1e-11 72.0 61 65.6
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 9.2e-11 71.6 57 71.9
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 2.1e-10 70.5 94 69.1
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 6.0e-10 68.9 59 67.8
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 7.8e-10 68.6 60 63.3
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 7.8e-10 68.6 60 63.3
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 7.8e-10 68.6 106 56.6
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.0e-09 68.2 60 65.0
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.3e-09 67.8 54 72.2
CDE02G4366 Ceratophyllum demersum HOM05D065966 ORTHO05D007063 2.3e-09 67.0 73 49.3
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 5.1e-09 65.9 111 57.7
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 6.6e-09 65.5 106 60.4
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.1e-08 64.7 56 67.9
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.1e-08 64.7 92 63.0
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 1.1e-08 64.7 63 60.3
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 1.5e-08 64.3 107 58.9
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 2.5e-08 63.5 138 38.4
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 3.3e-08 63.2 57 64.9
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 3.3e-08 63.2 54 64.8
BraA01t02080Z Brassica rapa HOM05D020768 ORTHO05D007063 4.3e-08 62.8 142 50.7
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 5.6e-08 62.4 110 60.0
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 7.3e-08 62.0 52 67.3
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 7.3e-08 62.0 109 57.8
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 9.5e-08 61.6 56 66.1
AUR62040366 Chenopodium quinoa HOM05D006719 ORTHO05D007063 1.2e-07 61.2 139 37.4
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.1e-07 60.5 64 60.9
CDE05G3651 Ceratophyllum demersum HOM05D006719 ORTHO05D007063 2.1e-07 60.5 65 52.3
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.1e-07 60.5 58 58.6
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.1e-07 60.5 59 59.3
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 2.8e-07 60.1 52 63.5
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 4.7e-07 59.3 52 65.4
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 4.7e-07 59.3 54 57.4
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 6.2e-07 58.9 61 55.7
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 1.1e-06 58.2 109 35.8
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 1.1e-06 58.2 56 58.9
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 1.4e-06 57.8 56 62.5
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.8e-06 57.4 36 77.8
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 1.8e-06 57.4 47 66.0
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.8e-06 57.4 50 66.0
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 2.4e-06 57.0 51 64.7
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 3.1e-06 56.6 54 57.4
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 4.0e-06 56.2 57 56.1
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 5.2e-06 55.8 56 60.7
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 5.2e-06 55.8 59 54.2
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 6.8e-06 55.5 55 60.0
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 6.8e-06 55.5 55 60.0
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 8.9e-06 55.1 113 55.8
Pp3c22_17550 Physcomitrium patens HOM05D039838 ORTHO05D007063 8.9e-06 55.1 41 65.9
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 8.9e-06 55.1 51 66.7


User provided reference genes

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