Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1478G53958 Striga asiatica HOM05D007074 ORTHO05D008542 1.7e-129 466.1 240 100.0
SGA_v2.0_scaffold1G00191 Striga asiatica HOM05D007074 ORTHO05D008542 1.7e-129 466.1 240 100.0
Oeu034132.1 Olea europaea HOM05D007074 ORTHO05D008542 3.2e-32 142.9 267 40.4
Migut.M00897 Erythranthe guttata HOM05D007074 ORTHO05D008542 9.3e-32 141.4 251 42.2
COL.COLO4_31042 Corchorus olitorius HOM05D007074 ORTHO05D008542 3.9e-30 136.0 232 39.2
Hma1.2p1_0020F.1_g014170 Hydrangea macrophylla HOM05D007074 ORTHO05D008542 7.6e-26 121.7 213 39.9
Thecc.06G148300 Theobroma cacao HOM05D007074 ORTHO05D008542 8.5e-25 118.2 271 36.2
QL05p057294 Quercus lobata HOM05D007074 ORTHO05D008542 1.1e-24 117.9 229 39.3
MD05G1281700 Malus domestica HOM05D007074 ORTHO05D008542 2.7e-23 113.2 230 37.8
CiPaw.10G090600 Carya illinoinensis HOM05D007074 ORTHO05D008542 6.1e-23 112.1 237 37.6
Gohir.D05G150000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 7.9e-23 111.7 250 36.4
TWI53G1156 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 1.0e-22 111.3 216 40.7
Gorai.009G154100 Gossypium raimondii HOM05D007074 ORTHO05D008542 1.8e-22 110.5 250 36.0
Ciclev10017572m.g Citrus clementina HOM05D007074 ORTHO05D008542 5.1e-22 109.0 245 36.3
Cfa000927 Carpinus fangiana HOM05D007074 ORTHO05D008542 8.7e-22 108.2 229 40.2
Medtr2g019160 Medicago truncatula HOM05D007074 ORTHO05D008542 8.7e-22 108.2 251 33.5
Prupe.4G082900 Prunus persica HOM05D007074 ORTHO05D008542 3.3e-21 106.3 247 37.7
TPR.G26250 Trifolium pratense HOM05D007074 ORTHO05D008542 4.3e-21 105.9 246 34.6
Gohir.A05G147500 Gossypium hirsutum HOM05D007074 ORTHO05D008542 5.7e-21 105.5 252 36.1
Psat1g191080 Pisum sativum HOM05D007074 ORTHO05D008542 5.7e-21 105.5 252 35.3
Psat1g191160 Pisum sativum HOM05D007074 ORTHO05D008542 2.2e-20 103.6 247 34.0
PGSC0003DMG400021166 Solanum tuberosum HOM05D007074 ORTHO05D008542 2.2e-20 103.6 221 39.8
MD10G1260500 Malus domestica HOM05D007074 ORTHO05D008542 4.8e-20 102.4 227 35.7
vmacro03335 Vaccinium macrocarpon HOM05D001104 ORTHO05D006535 3.1e-19 99.8 247 33.6
Manes.17G071900 Manihot esculenta HOM05D007074 ORTHO05D008542 6.9e-19 98.6 247 34.4
Phvul.006G166000 Phaseolus vulgaris HOM05D007074 ORTHO05D008542 6.9e-19 98.6 242 33.1
Gohir.A06G138601 Gossypium hirsutum HOM05D007074 ORTHO05D008542 2.0e-18 97.1 216 35.2
Gohir.D06G143401 Gossypium hirsutum HOM05D007074 ORTHO05D008542 4.5e-18 95.9 216 34.7
Gorai.010G167100 Gossypium raimondii HOM05D007074 ORTHO05D008542 4.5e-18 95.9 243 35.8
Duzib235G1065 Durio zibethinus HOM05D007074 ORTHO05D008542 5.9e-18 95.5 263 32.7
FAN21G0051 Fragaria x ananassa HOM05D007074 ORTHO05D008542 2.2e-17 93.6 234 35.9
CiPaw.09G122000 Carya illinoinensis HOM05D007074 ORTHO05D008542 2.9e-17 93.2 235 37.9
TWI73G0984 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 3.8e-17 92.8 203 36.0
Lalb_Chr20g0117821 Lupinus albus HOM05D007074 ORTHO05D008542 1.9e-16 90.5 273 32.2
FAN25G3808 Fragaria x ananassa HOM05D007074 ORTHO05D008542 2.5e-16 90.1 234 37.2
Atru.chr10.1177 Acer truncatum HOM05D007074 ORTHO05D008542 3.2e-16 89.7 224 33.9
PGR031G2887 Punica granatum HOM05D007074 ORTHO05D008542 3.2e-16 89.7 262 31.7
FAN16G0984 Fragaria x ananassa HOM05D007074 ORTHO05D008542 9.4e-16 88.2 234 35.5
Dinv05217 Davidia involucrata HOM05D007074 ORTHO05D008542 2.1e-15 87.0 185 34.6
Eucgr.E02421 Eucalyptus grandis HOM05D007074 ORTHO05D008542 2.7e-15 86.7 241 34.0
Manes.15G123200 Manihot esculenta HOM05D007074 ORTHO05D008542 4.7e-15 85.9 241 33.6
Glyma.15G092900 Glycine max HOM05D007074 ORTHO05D008542 6.1e-15 85.5 241 33.6
Rhsim13G0115100 Rhododendron simsii HOM05D007074 ORTHO05D008542 7.9e-15 85.1 111 43.2
Glyma.13G219300 Glycine max HOM05D007074 ORTHO05D008542 1.4e-14 84.3 245 33.9
AL1G44090 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 1.8e-14 84.0 260 31.9
AL700U10010 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 1.8e-14 84.0 260 31.9
BcaB03g13841 Brassica carinata HOM05D007074 ORTHO05D008542 1.8e-14 84.0 261 30.3
MELO3C002739.2 Cucumis melo HOM05D007074 ORTHO05D008542 2.3e-14 83.6 236 33.1
CARHR029240 Cardamine hirsuta HOM05D007074 ORTHO05D008542 8.8e-14 81.6 256 33.2
THA.LOC104814307 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 2.0e-13 80.5 269 30.1
Gohir.A10G042100 Gossypium hirsutum HOM05D007074 ORTHO05D008542 5.7e-13 79.0 251 32.3
Sp1g26010 Schrenkiella parvula HOM05D007074 ORTHO05D008542 7.4e-13 78.6 269 29.4
A09p36350 Brassica napus HOM05D007074 ORTHO05D008542 9.7e-13 78.2 263 30.4
BraA09t39159Z Brassica rapa HOM05D007074 ORTHO05D008542 9.7e-13 78.2 263 30.4
Carub.0001s2842 Capsella rubella HOM05D007074 ORTHO05D008542 1.3e-12 77.8 278 29.5
Oeu052361.1 Olea europaea HOM05D007074 ORTHO05D008542 1.3e-12 77.8 117 47.0
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 1.7e-12 77.4 225 33.3
THA.LOC104820655 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 1.7e-12 77.4 273 30.8
A07p10060 Brassica napus HOM05D007074 ORTHO05D008542 2.8e-12 76.6 262 29.8
BraA07t28799Z Brassica rapa HOM05D007074 ORTHO05D008542 2.8e-12 76.6 262 29.8
CsaV3_1G032390 Cucumis sativus L. HOM05D007074 ORTHO05D008542 6.3e-12 75.5 234 33.3
Glyma.08G097500 Glycine max HOM05D007074 ORTHO05D008542 6.3e-12 75.5 238 29.8
BcaC05g27044 Brassica carinata HOM05D007074 ORTHO05D008542 8.2e-12 75.1 265 28.7
C05p29030 Brassica napus HOM05D007074 ORTHO05D008542 8.2e-12 75.1 265 28.7
BolC5t31631H Brassica oleracea HOM05D007074 ORTHO05D008542 8.2e-12 75.1 265 28.7
Gohir.D10G043000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 8.2e-12 75.1 235 33.2
Gorai.011G045600 Gossypium raimondii HOM05D007074 ORTHO05D008542 1.1e-11 74.7 235 33.2
Nn4g26598 Nelumbo nucifera HOM05D007074 ORTHO05D008542 1.1e-11 74.7 250 32.8
BcaB02g09522 Brassica carinata HOM05D007074 ORTHO05D008542 4.1e-11 72.8 263 30.0
BcaB06g28786 Brassica carinata HOM05D007074 ORTHO05D008542 5.3e-11 72.4 274 28.5
DCAR_003900 Daucus carota HOM05D007074 ORTHO05D008542 5.3e-11 72.4 220 31.8
Nn3g20397 Nelumbo nucifera HOM05D007074 ORTHO05D008542 5.3e-11 72.4 267 31.5
AT1G30190 Arabidopsis thaliana HOM05D007074 ORTHO05D008542 6.9e-11 72.0 266 29.7
BraA05t20049Z Brassica rapa HOM05D007074 ORTHO05D008542 6.9e-11 72.0 269 29.0
Lj6g0018330 Lotus japonicus HOM05D007074 ORTHO05D008542 6.9e-11 72.0 246 30.5
A05p11040 Brassica napus HOM05D007074 ORTHO05D008542 9.1e-11 71.6 269 28.3
Thhalv10008361m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 1.2e-10 71.2 275 27.6
Thhalv10017803m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 2.0e-10 70.5 283 29.0
BcaC02g11538 Brassica carinata HOM05D007074 ORTHO05D008542 2.6e-10 70.1 267 29.6
C04p14170 Brassica napus HOM05D007074 ORTHO05D008542 2.6e-10 70.1 267 29.6
BolC4t23006H Brassica oleracea HOM05D007074 ORTHO05D008542 2.6e-10 70.1 267 29.6
BcaB07g32617 Brassica carinata HOM05D007074 ORTHO05D008542 3.4e-10 69.7 279 28.3
ClCG03G006810 Citrullus lanatus HOM05D007074 ORTHO05D008542 5.9e-10 68.9 195 33.8
Sed0013579 Sechium edule HOM05D007074 ORTHO05D008542 1.3e-09 67.8 220 32.3
Potri.004G065300 Populus trichocarpa HOM05D007074 ORTHO05D008542 1.7e-09 67.4 238 30.7
A04p26510 Brassica napus HOM05D007074 ORTHO05D008542 2.2e-09 67.0 283 29.3
C04p63930 Brassica napus HOM05D007074 ORTHO05D008542 2.2e-09 67.0 283 29.3
Carub.0004s1629 Capsella rubella HOM05D007074 ORTHO05D008542 2.2e-09 67.0 297 29.0
BolC4t27860H Brassica oleracea HOM05D007074 ORTHO05D008542 2.9e-09 66.6 271 29.2
MBI02_g24299_MAGBIO Magnolia biondii HOM05D007074 ORTHO05D008542 1.4e-08 64.3 257 31.1
BraA04t18155Z Brassica rapa HOM05D007074 ORTHO05D008542 1.9e-08 63.9 275 28.4
Lalb_Chr18g0055351 Lupinus albus HOM05D007074 ORTHO05D008542 1.9e-08 63.9 236 28.4
CARHR128710 Cardamine hirsuta HOM05D007074 ORTHO05D008542 3.2e-08 63.2 278 28.4
Potri.011G083600 Populus trichocarpa HOM05D007074 ORTHO05D008542 5.5e-08 62.4 244 26.2
arahy.Tifrunner.gnm1.ann1.0G1Q0G Arachis hypogaea HOM05D007074 ORTHO05D008542 1.6e-07 60.8 275 26.5
arahy.Tifrunner.gnm1.ann1.4BL86F Arachis hypogaea HOM05D007074 ORTHO05D008542 1.6e-07 60.8 197 32.0
AT2G34610 Arabidopsis thaliana HOM05D007074 ORTHO05D008542 2.1e-07 60.5 288 28.1
CAN.G702.33 Capsicum annuum HOM05D007074 ORTHO05D008542 4.7e-07 59.3 130 38.5
Ca_00533_v3 Cicer arietinum L. HOM05D007074 ORTHO05D008542 6.1e-07 58.9 208 31.2
Sed0023002 Sechium edule HOM05D007074 ORTHO05D008542 2.3e-06 57.0 217 29.5
VMungo0540G2047 Vigna mungo HOM05D007074 ORTHO05D008542 3.0e-06 56.6 177 31.6
Aa31LG10G6790 Aethionema arabicum HOM05D007074 ORTHO05D008542 5.2e-06 55.8 227 28.6
ClCG03G006720 Citrullus lanatus HOM05D035155 ORTHO05D008542 6.7e-06 55.5 83 41.0
CsaV3_1G032290 Cucumis sativus L. HOM05D035155 ORTHO05D008542 6.7e-06 55.5 206 33.0


User provided reference genes

Program Settings