Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 9.6e-147 523.5 264 100.0
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 8.9e-76 287.7 242 64.5
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 4.4e-75 285.4 276 59.1
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 1.7e-66 256.9 185 65.9
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 6.4e-66 255.0 181 67.4
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 3.2e-65 252.7 185 64.9
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 9.2e-65 251.1 184 64.1
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 1.2e-64 250.8 182 64.8
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 1.6e-64 250.4 226 56.6
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 6.0e-64 248.4 169 69.8
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 7.8e-64 248.1 175 67.4
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 7.8e-64 248.1 183 65.6
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 3.9e-63 245.7 184 64.7
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 6.6e-63 245.0 177 66.7
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 1.1e-62 244.2 161 70.2
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 1.5e-62 243.8 178 66.3
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 7.3e-62 241.5 159 71.1
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 1.2e-61 240.7 161 71.4
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 2.8e-61 239.6 184 60.9
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 4.7e-61 238.8 183 63.4
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 6.2e-61 238.4 184 64.1
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 8.1e-61 238.0 171 64.9
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 1.4e-60 237.3 193 58.5
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 2.3e-60 236.5 182 63.7
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 2.3e-60 236.5 161 68.9
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 3.1e-60 236.1 185 61.6
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 5.2e-60 235.3 175 64.6
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 5.2e-60 235.3 161 67.7
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 1.2e-59 234.2 248 53.6
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 1.2e-59 234.2 175 64.0
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 1.5e-59 233.8 180 63.3
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 2.6e-59 233.0 184 64.1
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 2.6e-59 233.0 180 62.8
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 3.4e-59 232.6 173 62.4
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 4.4e-59 232.3 184 60.9
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 4.4e-59 232.3 184 60.3
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 5.8e-59 231.9 185 61.6
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 7.5e-59 231.5 183 61.2
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.3e-58 230.7 183 61.7
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 1.7e-58 230.3 239 52.3
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.9e-58 229.6 183 60.7
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 3.7e-58 229.2 184 60.3
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 3.7e-58 229.2 197 56.9
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 6.4e-58 228.4 168 67.3
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 8.3e-58 228.0 181 60.2
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 8.3e-58 228.0 181 60.2
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 1.1e-57 227.6 184 61.4
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.4e-57 227.3 183 61.2
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 5.4e-57 225.3 183 60.7
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 7.1e-57 224.9 177 62.1
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 9.2e-57 224.6 177 61.0
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 9.2e-57 224.6 178 60.7
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 9.2e-57 224.6 181 59.7
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 1.6e-56 223.8 175 60.0
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 1.6e-56 223.8 189 57.7
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 3.5e-56 222.6 177 60.5
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 4.6e-56 222.2 182 59.3
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 6.0e-56 221.9 184 57.6
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 2.3e-55 219.9 159 66.0
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 2.3e-55 219.9 182 61.0
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 3.9e-55 219.2 181 59.1
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 8.6e-55 218.0 223 55.2
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 1.5e-54 217.2 178 59.0
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 1.5e-54 217.2 189 57.7
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 1.9e-54 216.9 184 60.3
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 1.9e-54 216.9 184 60.3
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 2.5e-54 216.5 172 60.5
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 1.2e-53 214.2 181 58.6
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 1.2e-53 214.2 173 59.5
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 1.6e-53 213.8 163 62.0
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 2.1e-53 213.4 177 59.3
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 4.7e-53 212.2 234 48.7
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 4.7e-53 212.2 166 60.2
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 6.2e-53 211.8 187 57.8
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 1.1e-52 211.1 241 49.8
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 2.3e-52 209.9 173 57.8
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 2.3e-52 209.9 163 62.6
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 3.1e-52 209.5 187 57.2
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 1.2e-51 207.6 178 57.9
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 2.0e-51 206.8 178 57.3
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 2.0e-51 206.8 178 57.3
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 4.4e-51 205.7 178 57.3
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 4.4e-51 205.7 178 57.3
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 5.8e-51 205.3 161 62.7
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 8.4e-50 201.4 175 60.6
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 2.4e-49 199.9 168 56.0
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 4.6e-48 195.7 184 57.1
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 4.6e-48 195.7 168 57.1
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 6.6e-47 191.8 179 55.3
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 2.5e-46 189.9 164 54.3
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 2.4e-44 183.3 159 57.9
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 6.8e-44 181.8 134 64.2
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 9.3e-41 171.4 160 49.4
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 1.2e-40 171.0 158 51.9
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 1.7e-39 167.2 123 65.0
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 4.3e-38 162.5 115 66.1
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 7.6e-35 151.8 124 58.1
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 3.8e-34 149.4 178 42.7
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 6.4e-34 148.7 100 68.0
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 2.1e-32 143.7 170 42.9
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 1.9e-30 137.1 144 50.7
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 4.8e-29 132.5 138 50.0
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 2.6e-27 126.7 117 54.7
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 5.3e-20 102.4 160 33.8
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 9.0e-20 101.7 141 33.3
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 2.0e-19 100.5 156 30.8
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 3.4e-19 99.8 103 53.4
CBR_g57728 Chara braunii HOM05D006617 ORTHO05D008247 4.5e-19 99.4 115 43.5
Aqoxy7G00382 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 2.1e-16 90.5 67 62.7
CARHR126330 Cardamine hirsuta HOM05D006617 ORTHO05D008247 1.3e-15 87.8 72 58.3
AagrBONN_evm.TU.Sc2ySwM_117.2950 Anthoceros agrestis HOM05D006617 ORTHO05D008247 2.2e-10 70.5 166 28.9
CDE06G1437 Ceratophyllum demersum HOM05D006617 ORTHO05D008247 9.3e-09 65.1 49 65.3
PRCOL_00003136 Prasinoderma coloniale HOM05D006617 ORTHO05D008247 9.3e-09 65.1 141 26.2
Pp3c8_19270 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.6e-08 64.3 163 26.4
MBI19_g11841_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 1.0e-07 61.6 108 30.6
AT2G31670 Arabidopsis thaliana HOM05D003252 ORTHO05D003640 5.1e-07 59.3 107 31.8
Carub.0004s1297 Capsella rubella HOM05D003252 ORTHO05D003640 6.7e-07 58.9 107 29.9
Thhalv10002638m.g Eutrema salsugineum HOM05D003252 ORTHO05D003640 8.7e-07 58.5 107 30.8
ATR0377G002 Amborella trichopoda HOM05D003252 ORTHO05D003640 3.3e-06 56.6 108 30.6
CiPaw.04G145000 Carya illinoinensis HOM05D003252 ORTHO05D003640 3.3e-06 56.6 110 29.1
Eucgr.C03557 Eucalyptus grandis HOM05D003252 ORTHO05D003640 3.3e-06 56.6 127 29.9
CANSAT46G0002 Cannabis sativa HOM05D003252 ORTHO05D003640 7.4e-06 55.5 101 28.7
CANSAT56G4065 Cannabis sativa HOM05D003252 ORTHO05D003640 7.4e-06 55.5 101 31.7
Peaxi162Scf00073g00132 Petunia axillaris HOM05D003252 ORTHO05D003640 7.4e-06 55.5 98 30.6
Peaxi162Scf00127g00006 Petunia axillaris HOM05D003252 ORTHO05D003640 7.4e-06 55.5 98 30.6
CAN.G198.16 Capsicum annuum HOM05D003252 ORTHO05D003640 9.7e-06 55.1 98 29.6


User provided reference genes

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