Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold146G36238 Striga asiatica HOM05D001962 ORTHO05D401629 1.3e-60 236.5 145 100.0
SGA_v2.0_scaffold104G30105 Striga asiatica HOM05D000389 ORTHO05D000287 3.4e-21 105.5 108 77.8
SGA_v2.0_scaffold5G02675 Striga asiatica HOM05D001962 ORTHO05D002236 9.7e-08 60.8 38 86.8
Lj3g0016324 Lotus japonicus HOM05D001962 ORTHO05D002236 1.4e-06 57.0 42 71.4
Duzib160G0181 Durio zibethinus HOM05D001962 ORTHO05D002236 1.8e-06 56.6 49 61.2
Gorai.010G064400 Gossypium raimondii HOM05D001962 ORTHO05D002236 1.8e-06 56.6 50 62.0
BcaC01g01331 Brassica carinata HOM05D001962 ORTHO05D002236 2.4e-06 56.2 49 57.1
BolC3t21391H Brassica oleracea HOM05D001962 ORTHO05D002236 2.4e-06 56.2 49 57.1
Gohir.D06G055100 Gossypium hirsutum HOM05D001962 ORTHO05D002236 2.4e-06 56.2 50 64.0
Atru.chr7.1224 Acer truncatum HOM05D001962 ORTHO05D002236 3.1e-06 55.8 38 78.9
AT3G15710 Arabidopsis thaliana HOM05D001962 ORTHO05D002236 4.1e-06 55.5 49 57.1
AL3G28380 Arabidopsis lyrata HOM05D001962 ORTHO05D002236 5.3e-06 55.1 49 57.1
CANSAT11G1037 Cannabis sativa HOM05D001962 ORTHO05D002236 5.3e-06 55.1 38 76.3
CiPaw.02G155900 Carya illinoinensis HOM05D001962 ORTHO05D002236 5.3e-06 55.1 49 59.2
Ciclev10009146m.g Citrus clementina HOM05D001962 ORTHO05D002236 5.3e-06 55.1 38 78.9
Psat5g301720 Pisum sativum HOM05D001962 ORTHO05D002236 5.3e-06 55.1 53 64.2
Aa31LG8G2930 Aethionema arabicum HOM05D001962 ORTHO05D002236 9.1e-06 54.3 49 57.1
Cfa001981 Carpinus fangiana HOM05D001962 ORTHO05D002236 9.1e-06 54.3 49 59.2
Ciclev10026591m.g Citrus clementina HOM05D001962 ORTHO05D002236 9.1e-06 54.3 49 59.2
MD02G1033800 Malus domestica HOM05D001962 ORTHO05D002236 9.1e-06 54.3 38 73.7
SalBow2G0972 Salvia bowleyana HOM05D001962 ORTHO05D002236 9.1e-06 54.3 38 73.7
TPR.G37295 Trifolium pratense HOM05D001962 ORTHO05D002236 9.1e-06 54.3 49 59.2


User provided reference genes

Program Settings