Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-150 535.4 272 100.0
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-120 435.6 363 67.5
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-92 341.7 324 56.8
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-80 303.1 425 44.2
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-73 280.4 233 63.9
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-70 270.0 330 48.8
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 8.0e-64 248.1 388 37.6
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-62 242.7 337 41.5
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 4.4e-62 242.3 409 35.9
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 8.3e-61 238.0 445 38.2
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-60 237.7 373 39.1
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 8.6e-58 228.0 254 46.5
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-55 220.7 331 44.1
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 8.9e-55 218.0 487 31.6
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 4.1e-52 209.1 214 55.6
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-50 202.6 396 35.9
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 8.1e-48 194.9 493 28.6
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-46 189.5 343 33.5
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 7.1e-44 181.8 101 83.2
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-36 155.6 281 38.1
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-35 151.8 294 36.4
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-34 149.4 236 40.3
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-33 147.9 236 39.8
SGA_v2.0_scaffold89G27407 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-33 145.2 125 64.0
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-31 139.4 288 39.2
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-29 132.9 176 39.8
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-28 129.4 258 32.2
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-27 125.9 171 41.5
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-27 125.2 448 27.2
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 3.8e-21 106.3 97 44.3
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 3.8e-21 106.3 96 46.9
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-21 105.1 107 44.9
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-21 105.1 78 65.4
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.4e-20 103.6 98 44.9
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 5.4e-20 102.4 98 45.9
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-19 101.3 104 46.2
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-18 98.2 100 45.0
SGA_v2.0_scaffold134G34702 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-18 97.8 135 42.2
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-18 96.3 102 47.1
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-18 96.3 104 43.3
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-17 94.7 95 44.2
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-17 93.2 107 39.3
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 2.1e-16 90.5 104 36.5
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 2.1e-16 90.5 275 27.3
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 8.1e-16 88.6 100 41.0
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-15 87.0 88 46.6
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-15 86.7 81 46.9
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-14 83.6 104 41.3
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-13 80.5 104 36.5
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-13 79.3 104 37.5
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 6.4e-13 79.0 97 39.2
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 8.4e-13 78.6 98 35.7
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-12 77.4 358 27.1
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-12 76.6 68 45.6
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-11 72.4 76 39.5
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-11 72.4 47 55.3
SGA_v2.0_scaffold54G19565 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-11 72.4 236 30.5
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-10 71.6 242 26.9
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 3.9e-10 69.7 100 28.0
SGA_v2.0_scaffold193G40692 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-09 67.8 89 41.6
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 7.4e-09 65.5 110 30.9
SGA_v2.0_scaffold24G10399 Striga asiatica HOM05D006612 ORTHO05D009014 7.4e-09 65.5 80 40.0
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-08 64.7 278 25.9
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 2.1e-08 63.9 126 31.0
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 4.8e-08 62.8 53 58.5
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-08 62.4 99 29.3
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.4e-07 61.2 97 32.0
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.4e-07 60.5 275 23.6
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 1.2e-06 58.2 99 27.3
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 1.5e-06 57.8 184 27.7
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 4.5e-06 56.2 91 31.9
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 4.5e-06 56.2 100 27.0
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 7.6e-06 55.5 100 29.0
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 1.0e-05 55.1 95 31.6
SGA_v2.0_scaffold579G53032 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-05 55.1 85 45.9


User provided reference genes

Program Settings