Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold146G36209 Striga asiatica HOM05D000626 ORTHO05D003868 1.3e-134 483.0 245 100.0
SGA_v2.0_scaffold31G12912 Striga asiatica HOM05D000626 ORTHO05D003868 1.3e-25 120.9 87 77.0
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 3.9e-17 92.8 93 55.9
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 8.7e-17 91.7 87 60.9
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.5e-16 90.9 92 55.4
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 1.2e-15 87.8 108 49.1
Nitab4.5_0000336g0150 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.2e-15 87.8 87 57.5
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 1.2e-15 87.8 94 51.1
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 1.6e-15 87.4 87 55.2
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 2.1e-15 87.0 87 58.6
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.1e-15 87.0 108 43.5
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 2.8e-15 86.7 87 57.5
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 3.6e-15 86.3 85 57.6
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 6.2e-15 85.5 87 52.9
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 6.2e-15 85.5 87 55.2
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 6.2e-15 85.5 87 54.0
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 8.1e-15 85.1 87 54.0
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 8.1e-15 85.1 87 51.7
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.4e-14 84.3 87 50.6
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 1.8e-14 84.0 87 52.9
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.8e-14 84.0 87 51.7
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 1.8e-14 84.0 87 51.7
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 1.8e-14 84.0 87 52.9
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.8e-14 84.0 87 55.2
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.8e-14 84.0 87 54.0
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 2.4e-14 83.6 87 52.9
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 2.4e-14 83.6 87 51.7
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 2.4e-14 83.6 87 50.6
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.4e-14 83.6 87 52.9
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 2.4e-14 83.6 87 51.7
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 3.1e-14 83.2 87 52.9
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 3.1e-14 83.2 87 51.7
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 3.1e-14 83.2 87 52.9
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 3.1e-14 83.2 87 51.7
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 3.1e-14 83.2 87 51.7
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 4.0e-14 82.8 87 54.0
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 4.0e-14 82.8 87 52.9
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 4.0e-14 82.8 87 51.7
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 5.2e-14 82.4 86 54.7
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 5.2e-14 82.4 87 50.6
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 5.2e-14 82.4 87 51.7
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 5.2e-14 82.4 87 51.7
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 6.9e-14 82.0 87 50.6
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 6.9e-14 82.0 87 51.7
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 6.9e-14 82.0 87 50.6
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 9.0e-14 81.6 87 50.6
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 9.0e-14 81.6 87 51.7
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 9.0e-14 81.6 87 50.6
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 9.0e-14 81.6 87 51.7
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 1.2e-13 81.3 87 51.7
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 1.2e-13 81.3 87 52.9
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 1.5e-13 80.9 87 49.4
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 1.5e-13 80.9 87 51.7
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 1.5e-13 80.9 87 50.6
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.5e-13 80.9 87 50.6
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 2.0e-13 80.5 139 40.3
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 2.0e-13 80.5 87 50.6
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 2.6e-13 80.1 112 43.8
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 2.6e-13 80.1 87 50.6
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 3.4e-13 79.7 119 43.7
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 3.4e-13 79.7 67 61.2
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 3.4e-13 79.7 87 52.9
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 4.4e-13 79.3 87 48.3
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 4.4e-13 79.3 87 50.6
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 5.8e-13 79.0 87 49.4
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 5.8e-13 79.0 84 52.4
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 5.8e-13 79.0 87 49.4
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 5.8e-13 79.0 87 49.4
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 5.8e-13 79.0 137 36.5
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 5.8e-13 79.0 87 52.9
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 7.6e-13 78.6 87 49.4
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 7.6e-13 78.6 85 51.8
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 7.6e-13 78.6 87 49.4
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 7.6e-13 78.6 87 51.7
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 7.6e-13 78.6 123 43.9
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 7.6e-13 78.6 123 43.9
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 7.6e-13 78.6 100 42.0
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 9.9e-13 78.2 85 52.9
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.3e-12 77.8 87 49.4
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.3e-12 77.8 87 52.9
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.3e-12 77.8 87 50.6
CSS0013243 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.7e-12 77.4 111 44.1
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.7e-12 77.4 87 48.3
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.7e-12 77.4 87 48.3
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 2.2e-12 77.0 86 51.2
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 2.2e-12 77.0 87 49.4
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 2.2e-12 77.0 124 41.9
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 2.2e-12 77.0 85 51.8
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 2.2e-12 77.0 87 49.4
CSS0002315 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 2.9e-12 76.6 108 43.5
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 2.9e-12 76.6 108 44.4
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 3.8e-12 76.3 87 50.6
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 3.8e-12 76.3 87 49.4
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 4.9e-12 75.9 87 50.6
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 4.9e-12 75.9 87 49.4
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 6.4e-12 75.5 87 50.6
HanXRQChr06g0170541 Helianthus annuus HOM05D000626 ORTHO05D003868 6.4e-12 75.5 86 50.0
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 6.4e-12 75.5 87 48.3
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 6.4e-12 75.5 87 49.4
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 8.4e-12 75.1 108 44.4
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 8.4e-12 75.1 87 44.8
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 1.1e-11 74.7 87 50.6
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 1.1e-11 74.7 89 48.3
HanXRQChr03g0075101 Helianthus annuus HOM05D000626 ORTHO05D003868 1.1e-11 74.7 87 49.4
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 1.1e-11 74.7 84 48.8
MD12G1035200 Malus domestica HOM05D000626 ORTHO05D003868 1.4e-11 74.3 87 47.1
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 1.9e-11 73.9 87 48.3
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 2.4e-11 73.6 124 41.1
SEGI_04451 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 3.2e-11 73.2 108 40.7
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.4e-11 72.4 79 49.4
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 9.3e-11 71.6 87 46.0
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 9.3e-11 71.6 83 47.0
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 9.3e-11 71.6 87 46.0
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.2e-10 71.2 87 44.8
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 1.6e-10 70.9 79 48.1
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 1.6e-10 70.9 83 45.8
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 2.1e-10 70.5 87 44.8
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 2.1e-10 70.5 87 44.8
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 2.1e-10 70.5 87 44.8
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 2.7e-10 70.1 87 44.8
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 3.5e-10 69.7 79 49.4
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 3.5e-10 69.7 87 51.7
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 3.5e-10 69.7 87 43.7
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 3.5e-10 69.7 85 47.1
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 4.6e-10 69.3 79 49.4
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 4.6e-10 69.3 87 43.7
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 4.6e-10 69.3 85 45.9
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 4.6e-10 69.3 87 43.7
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 4.6e-10 69.3 79 50.6
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 7.8e-10 68.6 87 42.5
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 7.8e-10 68.6 87 44.8
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 1.0e-09 68.2 87 43.7
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 1.0e-09 68.2 133 38.3
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.3e-09 67.8 79 46.8
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.7e-09 67.4 85 43.5
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.7e-09 67.4 92 42.4
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.3e-09 67.0 85 45.9
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 3.0e-09 66.6 108 40.7
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 3.0e-09 66.6 85 42.4
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 5.1e-09 65.9 85 42.4
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.1e-09 65.9 92 41.3
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 6.6e-09 65.5 87 44.8
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.1e-08 64.7 70 48.6
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 1.9e-08 63.9 87 43.7
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 1.9e-08 63.9 87 43.7
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 4.3e-08 62.8 87 42.5
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 7.3e-08 62.0 71 47.9
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 9.6e-08 61.6 70 47.1
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 9.6e-08 61.6 87 43.7
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 9.6e-08 61.6 87 41.4
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 2.1e-07 60.5 109 34.9
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 8.1e-07 58.5 81 43.2
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 1.1e-06 58.2 118 34.7
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 4.0e-06 56.2 122 32.0
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 9.0e-06 55.1 42 64.3
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 9.0e-06 55.1 87 36.8


User provided reference genes

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