Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 4.3e-92 341.3 169 100.0
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 3.6e-70 268.5 173 79.2
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 3.1e-58 228.8 179 64.2
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 2.5e-55 219.2 181 60.8
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 3.2e-55 218.8 186 64.0
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 5.5e-55 218.0 186 64.0
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 1.2e-54 216.9 172 66.3
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 3.6e-54 215.3 180 59.4
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 3.6e-54 215.3 179 63.1
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 2.3e-53 212.6 177 60.5
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 5.7e-52 208.0 173 60.1
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 9.7e-52 207.2 173 60.1
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 2.8e-51 205.7 180 58.3
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 6.3e-51 204.5 178 58.4
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.2e-49 200.3 180 57.8
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 2.7e-49 199.1 179 58.7
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.3e-48 196.8 177 59.3
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.7e-48 196.4 177 59.3
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 2.2e-48 196.1 174 59.2
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.0e-48 194.9 179 58.1
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 6.5e-48 194.5 185 56.2
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 1.5e-47 193.4 175 57.7
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 7.2e-47 191.0 180 56.1
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 6.1e-46 188.0 179 56.4
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.0e-45 187.2 179 56.4
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 1.8e-45 186.4 179 56.4
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.8e-45 186.4 179 56.4
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 6.8e-45 184.5 178 51.7
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 8.8e-45 184.1 182 54.9
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 8.8e-45 184.1 170 58.2
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 1.7e-43 179.9 179 53.6
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.7e-43 179.9 184 50.5
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 2.2e-43 179.5 173 53.2
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 2.2e-43 179.5 171 56.7
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 2.8e-43 179.1 179 56.4
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 6.3e-43 177.9 179 55.9
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 1.1e-42 177.2 182 52.7
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 1.1e-42 177.2 170 52.4
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 3.1e-42 175.6 181 52.5
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 5.4e-42 174.9 174 55.2
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 7.0e-42 174.5 180 54.4
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 9.1e-42 174.1 173 52.0
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 9.1e-42 174.1 177 52.5
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 3.5e-41 172.2 183 54.1
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 4.5e-41 171.8 181 52.5
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 7.7e-41 171.0 181 51.4
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 3.8e-40 168.7 174 51.1
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 6.6e-40 167.9 173 53.2
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 8.6e-40 167.5 181 51.9
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.9e-39 166.4 178 50.6
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 2.5e-39 166.0 184 53.8
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 4.2e-39 165.2 181 50.8
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 4.2e-39 165.2 177 50.8
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 4.2e-39 165.2 162 54.9
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 5.5e-39 164.9 163 54.0
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 9.5e-39 164.1 181 50.3
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 9.5e-39 164.1 162 54.3
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 2.8e-38 162.5 176 48.9
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.8e-38 162.5 181 48.1
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 3.6e-38 162.2 168 51.2
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 3.6e-38 162.2 180 46.7
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.4e-37 160.2 172 48.8
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.8e-37 159.8 180 45.0
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 1.8e-37 159.8 163 52.8
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 4.0e-37 158.7 181 48.1
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 6.8e-37 157.9 175 49.1
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 6.8e-37 157.9 162 53.1
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 8.9e-37 157.5 175 48.6
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.2e-36 157.1 188 47.9
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 2.6e-36 156.0 174 47.7
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 2.6e-36 156.0 171 53.2
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 4.4e-36 155.2 170 51.8
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 5.7e-36 154.8 175 49.1
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 5.7e-36 154.8 175 49.1
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 7.5e-36 154.5 172 50.6
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 7.5e-36 154.5 181 47.5
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 9.8e-36 154.1 173 48.0
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 9.8e-36 154.1 171 50.9
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 9.8e-36 154.1 163 53.4
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 1.3e-35 153.7 164 52.4
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.2e-35 152.9 172 47.1
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 3.7e-35 152.1 173 48.0
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.7e-35 152.1 180 48.9
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.9e-35 151.8 171 46.8
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 6.3e-35 151.4 169 49.1
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 1.1e-34 150.6 170 48.2
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.1e-34 150.6 175 48.0
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.4e-34 150.2 176 47.7
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 1.4e-34 150.2 164 50.6
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 1.4e-34 150.2 173 46.2
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 4.1e-34 148.7 157 51.0
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 4.1e-34 148.7 163 52.1
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 5.4e-34 148.3 180 48.3
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 7.0e-34 147.9 174 44.8
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 7.0e-34 147.9 181 47.5
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 7.0e-34 147.9 181 45.3
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 1.2e-33 147.1 177 46.9
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.2e-33 147.1 170 48.8
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.6e-33 146.7 173 45.7
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 2.0e-33 146.4 164 51.8
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 2.7e-33 146.0 173 45.1
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 3.5e-33 145.6 173 46.2
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 4.5e-33 145.2 119 57.1
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.0e-32 144.1 176 44.9
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 1.0e-32 144.1 171 44.4
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 2.3e-32 142.9 173 44.5
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 2.9e-32 142.5 173 43.9
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 2.9e-32 142.5 173 43.9
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.9e-31 139.8 121 53.7
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 2.5e-31 139.4 173 43.4
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 4.3e-31 138.7 177 44.6
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 4.3e-31 138.7 171 45.6
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 7.3e-31 137.9 178 47.8
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 7.3e-31 137.9 173 42.8
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 9.5e-31 137.5 181 45.9
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 8.0e-30 134.4 167 40.7
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 1.4e-29 133.7 173 43.9
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 3.1e-29 132.5 170 45.9
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 8.9e-29 131.0 173 42.2
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 2.6e-28 129.4 177 42.4
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 2.6e-28 129.4 177 42.4
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 5.8e-28 128.3 115 53.0
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 1.3e-27 127.1 172 43.0
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 3.7e-27 125.6 174 42.0
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 4.9e-27 125.2 178 39.9
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 4.9e-27 125.2 178 39.9
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 9.2e-26 120.9 182 42.3
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 1.2e-25 120.6 181 39.2
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 1.9e-18 96.7 114 48.2
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.7e-16 90.1 167 34.1
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 4.7e-14 82.0 186 28.0
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.8e-13 80.1 166 30.1
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 8.9e-13 77.8 111 38.7


User provided reference genes

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