Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1464G53955 Striga asiatica HOM05D003512 ORTHO05D004013 9.2e-34 146.7 100 100.0
Migut.N02242 Erythranthe guttata HOM05D003512 ORTHO05D004013 1.2e-17 93.2 104 76.0
Aqoxy5G00078 Aquilegia oxysepala HOM05D003512 ORTHO05D004013 4.3e-15 84.7 100 49.0
SGA_v2.0_scaffold1G00682 Striga asiatica HOM05D003512 ORTHO05D004013 1.3e-14 83.2 121 64.5
Oeu017338.1 Olea europaea HOM05D003512 ORTHO05D004013 2.1e-14 82.4 108 63.0
HanXRQChr15g0468101 Helianthus annuus HOM05D003512 ORTHO05D004013 3.7e-14 81.6 106 54.7
Oeu026192.1 Olea europaea HOM05D003512 ORTHO05D004013 6.2e-14 80.9 101 56.4
Migut.D00498 Erythranthe guttata HOM05D003512 ORTHO05D004013 1.4e-13 79.7 105 65.7
Peaxi162Scf00043g00067 Petunia axillaris HOM05D003512 ORTHO05D004013 1.8e-13 79.3 106 50.0
Solyc09g063130.3 Solanum lycopersicum HOM05D003512 ORTHO05D004013 9.0e-13 77.0 106 50.9
Sopen09g025300 Solanum pennellii HOM05D003512 ORTHO05D004013 9.0e-13 77.0 106 50.9
RcHm_v2.0_Chr6g0285621 Rosa chinensis HOM05D003512 ORTHO05D004013 1.5e-12 76.3 111 45.9
DCAR_012618 Daucus carota HOM05D003512 ORTHO05D004013 2.0e-12 75.9 108 48.1
MSTRG.21447 Avicennia marina HOM05D003512 ORTHO05D004013 5.8e-12 74.3 122 44.3
MD05G1183900 Malus domestica HOM05D003512 ORTHO05D004013 7.6e-12 73.9 111 45.9
PGSC0003DMG400022022 Solanum tuberosum HOM05D003512 ORTHO05D004013 7.6e-12 73.9 108 50.9
Manes.12G040000 Manihot esculenta HOM05D003512 ORTHO05D004013 1.0e-11 73.6 113 44.2
Lj5g0026666 Lotus japonicus HOM05D003512 ORTHO05D004013 1.7e-11 72.8 103 63.1
Potri.002G253800 Populus trichocarpa HOM05D003512 ORTHO05D004013 2.2e-11 72.4 106 46.2
QL09p043416 Quercus lobata HOM05D003512 ORTHO05D004013 2.2e-11 72.4 103 46.6
Atru.chr5.1920 Acer truncatum HOM05D003512 ORTHO05D004013 2.9e-11 72.0 107 60.7
DCAR_018535 Daucus carota HOM05D003512 ORTHO05D004013 3.8e-11 71.6 106 60.4
unitig_699.g19325 Utricularia gibba HOM05D003512 ORTHO05D004013 3.8e-11 71.6 101 40.6
Medtr1g069235 Medicago truncatula HOM05D003512 ORTHO05D004013 4.9e-11 71.2 114 55.3
FvH4_2g19960 Fragaria vesca HOM05D003512 ORTHO05D004013 6.5e-11 70.9 108 43.5
HanXRQChr10g0287201 Helianthus annuus HOM05D003512 ORTHO05D004013 6.5e-11 70.9 101 44.6
HanXRQChr13g0408961 Helianthus annuus HOM05D003512 ORTHO05D004013 8.4e-11 70.5 105 44.8
FAN27G0931 Fragaria x ananassa HOM05D003512 ORTHO05D004013 1.1e-10 70.1 108 44.4
Lsat_1_v5_gn_8_90440 Lactuca sativa HOM05D003512 ORTHO05D004013 1.9e-10 69.3 102 46.1
FAN15G0220 Fragaria x ananassa HOM05D003512 ORTHO05D004013 2.5e-10 68.9 108 41.7
VMungo0720G2276 Vigna mungo HOM05D003512 ORTHO05D004013 4.2e-10 68.2 97 59.8
TWI23G0432 Tripterygium wilfordii HOM05D003512 ORTHO05D004013 5.5e-10 67.8 108 48.1
Sp7g26760 Schrenkiella parvula HOM05D003512 ORTHO05D004013 9.3e-10 67.0 92 44.6
Nitab4.5_0004777g0040 Nicotiana tabacum HOM05D003512 ORTHO05D004013 1.2e-09 66.6 112 45.5
Oeu047197.1 Olea europaea HOM05D003512 ORTHO05D004013 1.6e-09 66.2 101 48.5
Carub.0007s1189 Capsella rubella HOM05D003512 ORTHO05D004013 2.1e-09 65.9 106 51.9
Medtr7g099390 Medicago truncatula HOM05D003512 ORTHO05D004013 2.1e-09 65.9 106 40.6
Ca_09628_v3 Cicer arietinum L. HOM05D003512 ORTHO05D004013 2.7e-09 65.5 108 43.5
Glyma.10G042000 Glycine max HOM05D003512 ORTHO05D004013 3.5e-09 65.1 97 60.8
Glyma.13G129400 Glycine max HOM05D003512 ORTHO05D004013 3.5e-09 65.1 97 55.7
Phvul.007G155500 Phaseolus vulgaris HOM05D003512 ORTHO05D004013 3.5e-09 65.1 98 60.2
unitig_22.g6316 Utricularia gibba HOM05D003512 ORTHO05D004013 3.5e-09 65.1 107 44.9
Actinidia30108 Actinidia chinensis HOM05D003512 ORTHO05D004013 6.0e-09 64.3 103 57.3
Cc01_g17500 Coffea canephora HOM05D003512 ORTHO05D004013 6.0e-09 64.3 110 60.9
Phvul.008G133700 Phaseolus vulgaris HOM05D003512 ORTHO05D004013 6.0e-09 64.3 96 58.3
Glyma.10G042100 Glycine max HOM05D003512 ORTHO05D004013 7.9e-09 63.9 97 59.8
Glyma.13G129500 Glycine max HOM05D003512 ORTHO05D004013 7.9e-09 63.9 97 59.8
BcaC07g38359 Brassica carinata HOM05D003512 ORTHO05D004013 1.0e-08 63.5 92 58.7
BcaNung07172 Brassica carinata HOM05D003512 ORTHO05D004013 1.0e-08 63.5 92 57.6
A08p19920 Brassica napus HOM05D003512 ORTHO05D004013 1.0e-08 63.5 92 58.7
C08p11070 Brassica napus HOM05D003512 ORTHO05D004013 1.0e-08 63.5 92 58.7
BraA08t33949Z Brassica rapa HOM05D003512 ORTHO05D004013 1.0e-08 63.5 92 58.7
MD10G1171800 Malus domestica HOM05D003512 ORTHO05D004013 1.0e-08 63.5 111 43.2
A01p09160 Brassica napus HOM05D003512 ORTHO05D004013 1.3e-08 63.2 107 46.7
COL.COLO4_36321 Corchorus olitorius HOM05D003512 ORTHO05D004013 1.8e-08 62.8 103 55.3
Ah.08g213830 Amaranthus hybridus HOM05D003512 ORTHO05D004013 2.3e-08 62.4 68 69.1
arahy.Tifrunner.gnm1.ann1.110G34 Arachis hypogaea HOM05D003512 ORTHO05D004013 3.0e-08 62.0 117 51.3
ECA236G1700 Erigeron canadensis HOM05D003512 ORTHO05D004013 3.0e-08 62.0 104 43.3
BcaB03g12587 Brassica carinata HOM05D003512 ORTHO05D004013 3.9e-08 61.6 93 52.7
Lalb_Chr06g0170911 Lupinus albus HOM05D003512 ORTHO05D004013 5.1e-08 61.2 105 41.9
AL7G23750 Arabidopsis lyrata HOM05D003512 ORTHO05D004013 6.7e-08 60.8 92 58.7
ECA247G0853 Erigeron canadensis HOM05D003512 ORTHO05D004013 6.7e-08 60.8 103 47.6
arahy.Tifrunner.gnm1.ann1.DHZ2RQ Arachis hypogaea HOM05D003512 ORTHO05D004013 8.7e-08 60.5 117 51.3
C01p10750 Brassica napus HOM05D003512 ORTHO05D004013 8.7e-08 60.5 107 51.4
BolC1t01034H Brassica oleracea HOM05D003512 ORTHO05D004013 8.7e-08 60.5 107 51.4
BraA01t00862Z Brassica rapa HOM05D003512 ORTHO05D004013 8.7e-08 60.5 107 49.5
Lalb_Chr25g0289731 Lupinus albus HOM05D003512 ORTHO05D004013 8.7e-08 60.5 107 38.3
BcaC06g32605 Brassica carinata HOM05D003512 ORTHO05D004013 1.1e-07 60.1 90 56.7
Lsat_1_v5_gn_9_12001 Lactuca sativa HOM05D003512 ORTHO05D004013 1.1e-07 60.1 102 54.9
Sabra02G0192900 Salix brachista HOM05D003512 ORTHO05D004013 1.1e-07 60.1 124 37.9
Aa31LG8G17250 Aethionema arabicum HOM05D003512 ORTHO05D004013 1.5e-07 59.7 82 47.6
Ah.15g093440 Amaranthus hybridus HOM05D003512 ORTHO05D004013 1.5e-07 59.7 70 75.7
Eucgr.B02162 Eucalyptus grandis HOM05D003512 ORTHO05D004013 1.9e-07 59.3 111 43.2
Hund18341 Selenicereus undatus HOM05D003512 ORTHO05D004013 1.9e-07 59.3 63 54.0
Aa31LG2G21620 Aethionema arabicum HOM05D003512 ORTHO05D004013 2.5e-07 58.9 89 41.6
Ca_08765_v3 Cicer arietinum L. HOM05D003512 ORTHO05D004013 2.5e-07 58.9 103 39.8
CARHR236540 Cardamine hirsuta HOM05D003512 ORTHO05D004013 3.3e-07 58.5 101 37.6
Nitab4.5_0001557g0070 Nicotiana tabacum HOM05D003512 ORTHO05D004013 3.3e-07 58.5 104 51.9
THA.LOC104814542 Tarenaya hassleriana HOM05D003512 ORTHO05D004013 3.3e-07 58.5 102 41.2
ATR0787G081 Amborella trichopoda HOM05D003512 ORTHO05D004013 4.3e-07 58.2 80 48.8
vmacro02722 Vaccinium macrocarpon HOM05D003512 ORTHO05D004013 4.3e-07 58.2 100 39.0
Gorai.001G235800 Gossypium raimondii HOM05D003512 ORTHO05D004013 5.7e-07 57.8 109 41.3
Sp3g33490 Schrenkiella parvula HOM05D003512 ORTHO05D004013 5.7e-07 57.8 98 46.9
CARHR110760 Cardamine hirsuta HOM05D003512 ORTHO05D004013 7.4e-07 57.4 108 40.7
unitig_85.g27272 Utricularia gibba HOM05D003512 ORTHO05D004013 7.4e-07 57.4 110 42.7
AT4G28750 Arabidopsis thaliana HOM05D003512 ORTHO05D004013 9.6e-07 57.0 92 53.3
BcaNung01368 Brassica carinata HOM05D003512 ORTHO05D004013 9.6e-07 57.0 107 51.4
Rhsim13G0041600 Rhododendron simsii HOM05D003512 ORTHO05D004013 9.6e-07 57.0 104 41.3
Carub.0003s3459 Capsella rubella HOM05D003512 ORTHO05D004013 1.3e-06 56.6 113 53.1
Sed0000934 Sechium edule HOM05D003512 ORTHO05D004013 1.3e-06 56.6 109 45.0
THA.LOC104804030 Tarenaya hassleriana HOM05D003512 ORTHO05D004013 1.3e-06 56.6 112 44.6
PGR142G3520 Punica granatum HOM05D003512 ORTHO05D004013 1.6e-06 56.2 109 45.0
Sed0015250 Sechium edule HOM05D003512 ORTHO05D004013 2.1e-06 55.8 104 39.4
AUR62025395 Chenopodium quinoa HOM05D003512 ORTHO05D004013 2.8e-06 55.5 26 96.2
Oeu039643.2 Olea europaea HOM05D003512 ORTHO05D004013 2.8e-06 55.5 26 96.2
vmacro19972 Vaccinium macrocarpon HOM05D003512 ORTHO05D004013 3.7e-06 55.1 26 92.3
arahy.Tifrunner.gnm1.ann1.HB1P9N Arachis hypogaea HOM05D003512 ORTHO05D004013 4.8e-06 54.7 117 47.9
PGSC0003DMG400020154 Solanum tuberosum HOM05D003512 ORTHO05D004013 4.8e-06 54.7 26 92.3
GSVIVG01028481001 Vitis vinifera HOM05D003512 ORTHO05D004013 4.8e-06 54.7 79 55.7
Zm00001eb306070 Zea mays HOM05D003512 ORTHO05D004013 6.2e-06 54.3 104 39.4
Rhsim05G0169700 Rhododendron simsii HOM05D003512 ORTHO05D004013 8.2e-06 53.9 26 92.3
TWI34G1801 Tripterygium wilfordii HOM05D003512 ORTHO05D004013 8.2e-06 53.9 110 44.5


User provided reference genes

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