Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 5.2e-133 477.6 229 100.0
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 2.2e-86 322.8 220 69.5
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 6.3e-86 321.2 217 71.0
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.8e-83 312.0 220 65.9
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.2e-82 308.9 220 67.3
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 5.5e-82 308.1 223 64.1
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.6e-81 305.4 224 64.3
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 7.9e-81 304.3 218 66.5
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 5.1e-80 301.6 200 67.5
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 5.1e-80 301.6 222 64.9
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 2.0e-79 299.7 218 65.6
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 4.4e-79 298.5 204 65.7
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 3.7e-78 295.4 204 64.7
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 1.1e-77 293.9 204 62.7
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 1.4e-77 293.5 215 63.7
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 8.0e-73 277.7 206 64.1
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 1.4e-72 276.9 210 60.0
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 1.8e-72 276.6 205 65.9
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 6.7e-72 274.6 233 57.1
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.6e-71 272.7 200 62.0
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.6e-71 272.7 200 62.0
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 4.4e-71 271.9 212 59.9
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 4.4e-71 271.9 209 60.8
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 2.8e-70 269.2 200 63.5
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 6.3e-70 268.1 221 57.9
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 6.3e-70 268.1 195 63.6
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 6.3e-70 268.1 193 63.7
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 8.2e-70 267.7 203 61.1
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.1e-69 267.3 195 65.1
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 1.1e-69 267.3 225 54.2
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 1.4e-69 266.9 198 60.6
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 1.8e-69 266.5 208 58.7
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 3.1e-69 265.8 194 63.9
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 3.1e-69 265.8 211 58.8
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 4.1e-69 265.4 207 61.8
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 9.1e-69 264.2 198 63.1
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 9.1e-69 264.2 212 58.5
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 1.2e-68 263.8 201 62.2
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 1.6e-68 263.5 208 58.7
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 2.0e-68 263.1 209 58.9
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 2.6e-68 262.7 198 63.1
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 3.5e-68 262.3 203 60.6
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 4.5e-68 261.9 229 58.5
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 4.5e-68 261.9 215 58.6
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 4.5e-68 261.9 206 59.2
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 7.7e-68 261.2 213 60.6
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 7.7e-68 261.2 204 60.8
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 7.7e-68 261.2 210 59.5
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 7.7e-68 261.2 210 59.5
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 7.7e-68 261.2 206 58.3
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 1.0e-67 260.8 216 61.1
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.0e-67 260.8 199 60.3
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.3e-67 260.4 210 59.0
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 2.2e-67 259.6 215 58.1
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 2.2e-67 259.6 189 64.0
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 2.9e-67 259.2 214 59.3
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 5.0e-67 258.5 210 61.9
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 5.0e-67 258.5 199 62.3
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 1.1e-66 257.3 207 60.4
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 1.5e-66 256.9 219 58.4
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 1.5e-66 256.9 208 61.1
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.9e-66 256.5 195 62.1
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.9e-66 256.5 195 62.1
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 2.5e-66 256.1 192 63.0
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 2.5e-66 256.1 207 59.4
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 2.5e-66 256.1 190 64.7
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 3.2e-66 255.8 207 60.4
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 4.2e-66 255.4 220 56.8
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 5.5e-66 255.0 221 57.5
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 5.5e-66 255.0 199 57.8
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 7.2e-66 254.6 207 59.9
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 7.2e-66 254.6 216 58.3
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 9.4e-66 254.2 198 58.6
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 9.4e-66 254.2 211 55.9
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 1.2e-65 253.8 207 59.4
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 1.2e-65 253.8 196 60.2
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 2.1e-65 253.1 195 62.1
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 2.7e-65 252.7 208 59.6
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 3.6e-65 252.3 202 58.9
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 8.0e-65 251.1 211 54.5
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 1.4e-64 250.4 207 57.5
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 6.8e-64 248.1 198 60.1
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 6.8e-64 248.1 219 52.5
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 8.8e-64 247.7 212 57.1
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 1.2e-63 247.3 208 57.2
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.2e-63 247.3 189 64.0
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 1.5e-63 246.9 196 59.7
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 2.6e-63 246.1 201 57.7
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 5.7e-63 245.0 208 57.2
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 5.7e-63 245.0 235 51.5
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 7.5e-63 244.6 213 54.9
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 9.7e-63 244.2 205 57.6
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 1.7e-62 243.4 208 56.2
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 2.2e-62 243.0 208 55.8
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 6.3e-62 241.5 209 56.5
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 6.3e-62 241.5 215 54.4
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 6.3e-62 241.5 212 53.8
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 1.1e-61 240.7 208 54.8
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 9.1e-61 237.7 215 53.0
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.6e-60 236.9 193 58.5
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 2.0e-60 236.5 208 54.3
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 2.0e-60 236.5 208 54.3
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 2.7e-60 236.1 217 54.4
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 3.5e-60 235.7 198 55.6
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 4.5e-60 235.3 201 55.2
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 4.5e-60 235.3 199 57.3
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 3.8e-59 232.3 199 57.8
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 5.0e-59 231.9 179 58.1
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 5.0e-59 231.9 202 55.0
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 5.0e-59 231.9 214 56.1
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.1e-58 230.7 204 55.4
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 1.9e-58 229.9 205 55.1
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 2.5e-58 229.6 228 51.8
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 3.2e-58 229.2 214 52.8
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 4.2e-58 228.8 205 53.2
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 4.2e-58 228.8 208 53.4
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 7.2e-58 228.0 226 50.4
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 7.2e-58 228.0 205 51.7
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 7.2e-58 228.0 193 52.3
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 7.2e-58 228.0 205 51.7
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.6e-57 226.9 228 47.8
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 2.1e-57 226.5 227 50.7
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 6.1e-57 224.9 198 54.0
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 8.0e-57 224.6 206 53.4
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 1.4e-56 223.8 199 51.3
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 2.3e-56 223.0 212 51.9
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 2.3e-56 223.0 199 53.8
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 3.0e-56 222.6 212 51.9
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 3.0e-56 222.6 207 52.7
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 5.2e-56 221.9 212 51.4
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 6.8e-56 221.5 206 51.5
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 8.8e-56 221.1 209 53.1
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 7.5e-55 218.0 213 51.2
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 7.5e-55 218.0 196 52.6
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 2.2e-54 216.5 214 49.1
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 2.8e-54 216.1 215 51.2
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 4.1e-53 212.2 195 51.3
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 7.7e-52 208.0 209 45.5
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 9.5e-50 201.1 179 54.7
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 4.4e-47 192.2 127 67.7
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 8.3e-46 188.0 194 46.4
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 1.2e-44 184.1 165 54.5
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.9e-42 176.8 171 52.0
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 7.3e-42 174.9 202 46.0
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 2.8e-41 172.9 134 60.4
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 6.1e-41 171.8 158 53.2
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 6.8e-40 168.3 223 38.6
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 9.8e-39 164.5 128 58.6
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 4.1e-37 159.1 101 72.3
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 7.0e-37 158.3 110 67.3
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 1.9e-34 150.2 188 42.0
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 8.9e-32 141.4 173 46.2
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 2.6e-31 139.8 103 63.1
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 3.4e-31 139.4 112 59.8
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 7.5e-31 138.3 116 56.9
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 1.7e-30 137.1 111 59.5
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 2.7e-28 129.8 165 43.0
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 4.6e-28 129.0 103 58.3
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 7.3e-26 121.7 147 45.6
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 3.6e-25 119.4 132 45.5
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 8.9e-24 114.8 220 34.1
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.2e-23 114.4 106 52.8
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 3.4e-23 112.8 113 48.7
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 4.4e-23 112.5 153 37.9
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 9.9e-23 111.3 92 58.7
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 3.7e-22 109.4 113 46.9
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 2.1e-20 103.6 85 56.5
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 7.8e-20 101.7 104 47.1
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 7.8e-20 101.7 84 51.2
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 9.6e-18 94.7 84 51.2
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 8.1e-17 91.7 88 48.9
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 4.4e-15 85.9 88 45.5
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 4.9e-14 82.4 61 60.7
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 6.4e-14 82.0 80 46.2
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.2e-12 77.8 61 59.0
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 2.7e-12 76.6 114 39.5
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 8.1e-09 65.1 83 39.8


User provided reference genes

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