Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 1.6e-199 699.1 338 100.0
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 7.4e-160 567.4 339 78.8
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 2.1e-154 549.3 338 75.1
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 7.7e-149 530.8 341 72.4
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.4e-142 510.0 344 69.2
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 4.5e-141 505.0 331 68.6
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 9.4e-139 497.3 338 69.8
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 3.6e-138 495.4 336 67.9
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 1.8e-137 493.0 336 67.6
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 3.0e-137 492.3 346 66.5
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 4.4e-136 488.4 345 66.7
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 4.8e-135 485.0 334 66.8
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 6.3e-135 484.6 335 66.9
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 6.3e-135 484.6 337 64.1
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.1e-134 483.8 344 66.3
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.8e-134 483.0 337 64.4
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 1.8e-134 483.0 334 67.1
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 3.1e-134 482.3 334 66.2
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 5.4e-134 481.5 339 64.3
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.3e-132 476.9 339 66.7
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 1.7e-132 476.5 341 65.7
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.5e-131 473.4 345 64.9
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 2.7e-130 469.2 343 66.2
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 4.7e-130 468.4 339 65.5
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 1.0e-129 467.2 340 61.8
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 1.8e-129 466.5 340 65.9
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 1.8e-129 466.5 336 64.0
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 1.2e-128 463.8 338 64.2
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 1.2e-128 463.8 335 64.8
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 2.6e-128 462.6 340 64.4
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.6e-128 462.6 340 61.5
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.6e-128 462.6 337 63.5
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 3.4e-128 462.2 340 64.4
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 7.5e-128 461.1 338 63.9
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 1.7e-127 459.9 340 62.4
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 2.2e-127 459.5 340 63.5
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.8e-127 459.1 339 64.6
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 2.8e-127 459.1 341 64.5
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 4.9e-127 458.4 340 62.9
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 8.3e-127 457.6 340 62.1
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 1.4e-126 456.8 340 61.8
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.8e-126 456.4 340 60.6
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.4e-126 456.1 337 63.2
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 3.1e-126 455.7 341 63.6
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 4.1e-126 455.3 345 62.0
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 4.1e-126 455.3 348 62.6
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 5.4e-126 454.9 340 62.9
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 7.0e-126 454.5 340 62.1
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 1.6e-125 453.4 336 61.9
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 1.6e-125 453.4 339 62.5
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 2.7e-125 452.6 341 63.0
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 5.9e-125 451.4 334 61.4
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 7.7e-125 451.1 336 62.8
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 1.7e-124 449.9 335 61.8
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 1.7e-124 449.9 342 61.1
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 2.3e-124 449.5 339 61.7
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 2.3e-124 449.5 332 60.8
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 2.9e-124 449.1 332 60.5
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 5.0e-124 448.4 337 61.7
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 6.6e-124 448.0 334 61.1
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 8.6e-124 447.6 339 61.1
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.1e-123 447.2 339 61.9
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.1e-123 447.2 340 62.6
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.1e-123 447.2 337 61.4
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 3.3e-123 445.7 335 61.2
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 2.1e-122 443.0 343 59.8
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 2.8e-122 442.6 333 60.1
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 2.8e-122 442.6 331 61.3
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 4.7e-122 441.8 333 61.6
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.8e-121 439.9 339 59.3
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 2.3e-121 439.5 339 60.5
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 2.3e-121 439.5 344 60.8
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 4.0e-121 438.7 333 60.7
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 5.2e-121 438.3 339 59.0
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 6.8e-121 438.0 335 60.3
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 1.2e-120 437.2 335 60.6
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 2.6e-120 436.0 334 60.8
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.4e-120 435.6 336 59.2
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 4.4e-120 435.3 341 59.5
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 8.3e-119 431.0 343 61.2
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 4.1e-118 428.7 345 57.4
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 7.0e-118 427.9 329 59.9
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.2e-118 427.6 329 59.9
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.2e-118 427.6 329 59.6
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 9.2e-118 427.6 383 54.3
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.2e-117 427.2 344 58.1
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 2.0e-117 426.4 336 60.4
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 3.9e-116 422.2 341 60.7
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.6e-116 421.4 329 59.6
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 8.6e-116 421.0 380 55.0
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 8.6e-116 421.0 348 57.5
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 1.1e-115 420.6 365 55.9
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-115 420.2 329 59.3
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.6e-115 418.3 329 58.4
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 8.9e-113 411.0 288 67.0
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 9.2e-110 401.0 353 56.7
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 1.6e-109 400.2 265 70.9
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 2.0e-109 399.8 338 56.8
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 1.1e-107 394.0 331 55.3
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.2e-106 390.6 331 53.8
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 1.6e-106 390.2 333 55.6
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 4.0e-105 385.6 337 56.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 1.3e-103 380.6 432 46.1
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 8.3e-103 377.9 327 54.4
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 3.6e-98 362.5 348 52.6
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 4.0e-97 359.0 336 51.5
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 1.2e-88 330.9 256 60.9
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 5.8e-88 328.6 255 61.6
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.9e-86 323.6 291 55.0
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 4.3e-83 312.4 239 57.7
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 2.2e-79 300.1 345 44.6
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 5.4e-78 295.4 226 60.2
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 7.9e-77 291.6 183 71.0
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.3e-71 274.2 341 39.6
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 5.5e-70 268.9 339 41.6
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-59 234.6 201 55.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 3.7e-50 203.0 184 57.6
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 5.9e-48 195.7 258 40.7
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 7.2e-46 188.7 198 49.5
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.4e-44 184.5 166 58.4
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.7e-42 177.6 184 50.0
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.9e-38 164.1 176 49.4
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.2e-36 156.0 212 42.0
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 2.2e-26 124.0 81 67.9
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 6.5e-23 112.5 135 42.2
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.8e-17 94.4 127 38.6
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.5e-16 89.7 60 63.3
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.5e-16 89.7 60 63.3
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.5e-16 89.7 60 63.3
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 3.8e-15 86.7 60 61.7
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-14 85.1 164 38.4
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 2.5e-14 84.0 71 54.9
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 9.5e-14 82.0 71 53.5
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.6e-13 80.1 71 53.5
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.5e-11 74.7 53 58.5
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.5e-11 74.7 53 58.5
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.7e-10 71.2 59 52.5
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.5e-08 63.5 70 42.9
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.9e-06 57.8 56 50.0
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.5e-06 57.4 59 45.8


User provided reference genes

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