Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 1.4e-105 386.3 195 100.0
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 1.2e-58 230.3 156 72.4
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 2.1e-58 229.6 141 80.1
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 8.9e-57 224.2 161 68.9
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 9.2e-54 214.2 131 80.2
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 3.5e-53 212.2 190 60.5
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 1.0e-52 210.7 191 60.7
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 2.3e-52 209.5 139 76.3
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 5.0e-52 208.4 155 68.4
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 4.3e-51 205.3 198 57.1
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 5.6e-51 204.9 131 77.1
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 1.6e-50 203.4 152 70.4
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.6e-50 203.4 133 73.7
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 2.1e-50 203.0 133 73.7
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 3.6e-50 202.2 133 72.9
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 3.6e-50 202.2 189 60.8
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 8.1e-50 201.1 136 72.1
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 8.1e-50 201.1 128 76.6
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 1.1e-49 200.7 150 69.3
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 1.1e-49 200.7 161 65.2
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 1.4e-49 200.3 197 58.4
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 1.4e-49 200.3 106 90.6
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 1.4e-49 200.3 106 90.6
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.8e-49 199.9 196 56.1
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 1.8e-49 199.9 177 59.9
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 2.3e-49 199.5 133 72.9
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 2.3e-49 199.5 145 72.4
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 2.3e-49 199.5 161 64.6
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 3.1e-49 199.1 145 70.3
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 4.0e-49 198.7 129 79.1
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 4.0e-49 198.7 106 89.6
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 5.2e-49 198.4 133 76.7
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 5.2e-49 198.4 161 64.6
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 5.2e-49 198.4 192 56.2
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 6.8e-49 198.0 128 78.1
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 8.9e-49 197.6 134 75.4
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.2e-48 197.2 194 56.2
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.2e-48 197.2 194 55.7
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 2.0e-48 196.4 153 68.0
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 2.0e-48 196.4 104 89.4
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 2.6e-48 196.1 141 71.6
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 3.4e-48 195.7 152 67.1
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 3.4e-48 195.7 173 60.7
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 4.4e-48 195.3 141 71.6
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 5.8e-48 194.9 152 65.1
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 5.8e-48 194.9 141 68.1
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 5.8e-48 194.9 140 73.6
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 7.5e-48 194.5 137 71.5
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 7.5e-48 194.5 201 55.2
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 1.3e-47 193.7 143 68.5
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 2.9e-47 192.6 136 69.9
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 2.9e-47 192.6 129 72.1
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 2.9e-47 192.6 140 68.6
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 3.7e-47 192.2 136 69.9
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 3.7e-47 192.2 136 69.9
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 8.3e-47 191.0 128 73.4
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 1.4e-46 190.3 129 74.4
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 1.9e-46 189.9 142 66.9
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 1.9e-46 189.9 126 73.8
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 2.4e-46 189.5 159 61.0
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 2.4e-46 189.5 181 57.5
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 2.4e-46 189.5 138 70.3
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 3.2e-46 189.1 108 83.3
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 4.1e-46 188.7 126 77.0
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 7.1e-46 188.0 139 70.5
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 9.2e-46 187.6 101 86.1
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 9.2e-46 187.6 149 66.4
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 1.2e-45 187.2 149 65.1
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 1.2e-45 187.2 154 65.6
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 2.1e-45 186.4 139 68.3
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 2.7e-45 186.0 138 70.3
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 2.7e-45 186.0 164 62.2
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 3.5e-45 185.7 139 68.3
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 3.5e-45 185.7 139 68.3
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 3.5e-45 185.7 138 69.6
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 3.5e-45 185.7 126 75.4
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 4.6e-45 185.3 122 76.2
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 6.0e-45 184.9 139 67.6
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 6.0e-45 184.9 139 67.6
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 6.0e-45 184.9 139 67.6
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 1.3e-44 183.7 167 62.3
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 4.7e-42 175.3 142 64.1
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 8.1e-42 174.5 137 62.0
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 5.2e-41 171.8 117 70.1
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 3.8e-39 165.6 104 72.1
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 1.9e-38 163.3 101 72.3
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 5.4e-38 161.8 83 90.4
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 6.0e-37 158.3 133 66.2
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 7.8e-37 157.9 104 73.1
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 1.0e-36 157.5 100 73.0
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 3.9e-36 155.6 141 57.4
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 1.9e-35 153.3 144 54.9
COL.COLO4_23838 Corchorus olitorius HOM05D005851 ORTHO05D007137 3.6e-34 149.1 79 87.3
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 1.5e-32 143.7 102 68.6
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 1.5e-32 143.7 75 82.7
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 4.9e-31 138.7 133 56.4
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 6.4e-31 138.3 189 47.1
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 1.1e-30 137.5 99 67.7
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.3e-28 129.8 123 52.0
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 4.3e-27 125.6 102 55.9
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.6e-26 123.6 161 45.3
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 5.3e-25 118.6 123 48.8
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 5.8e-24 115.2 72 77.8
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 4.9e-23 112.1 91 56.0
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 2.4e-22 109.8 59 94.9
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 7.9e-21 104.8 49 89.8
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 1.3e-20 104.0 116 51.7
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 6.7e-20 101.7 90 63.3
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 1.5e-19 100.5 89 57.3
Dinv39057 Davidia involucrata HOM05D005851 ORTHO05D007137 3.3e-19 99.4 53 88.7
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 3.3e-19 99.4 85 63.5
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 9.6e-19 97.8 70 68.6
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 8.1e-18 94.7 84 58.3
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 8.1e-18 94.7 84 58.3
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 8.1e-18 94.7 84 58.3
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 8.1e-18 94.7 84 58.3
Nn4g26436 Nelumbo nucifera HOM05D005851 ORTHO05D007137 3.1e-17 92.8 52 82.7
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 1.2e-16 90.9 84 53.6
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 6.4e-15 85.1 146 37.0
CBR_g50783 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-13 79.7 81 49.4
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 5.6e-11 72.0 41 80.5
Aa31LG6G4700 Aethionema arabicum HOM05D000943 ORTHO05D002475 2.9e-07 59.7 40 75.0
Lj2C204G6 Lonicera japonica HOM05D005851 ORTHO05D007137 2.9e-07 59.7 105 41.0
arahy.Tifrunner.gnm1.ann1.54ECHP Arachis hypogaea HOM05D005851 ORTHO05D007137 3.8e-07 59.3 39 82.1
arahy.Tifrunner.gnm1.ann1.CS7A8V Arachis hypogaea HOM05D005851 ORTHO05D007137 3.8e-07 59.3 39 82.1
arahy.Tifrunner.gnm1.ann1.IPBJ4Y Arachis hypogaea HOM05D005851 ORTHO05D007137 3.8e-07 59.3 39 82.1
arahy.Tifrunner.gnm1.ann1.Q2BFW3 Arachis hypogaea HOM05D005851 ORTHO05D007137 3.8e-07 59.3 39 82.1
Dinv39056 Davidia involucrata HOM05D005851 ORTHO05D007137 8.4e-07 58.2 100 41.0
Medtr5g011478 Medicago truncatula HOM05D005851 ORTHO05D007137 1.4e-06 57.4 39 76.9
arahy.Tifrunner.gnm1.ann1.6D2PAS Arachis hypogaea HOM05D005851 ORTHO05D007137 1.9e-06 57.0 38 81.6
arahy.Tifrunner.gnm1.ann1.UAJL6I Arachis hypogaea HOM05D005851 ORTHO05D007137 3.2e-06 56.2 59 49.2
BcaC09g48268 Brassica carinata HOM05D002423 ORTHO05D007137 3.2e-06 56.2 66 53.0
C01p52310 Brassica napus HOM05D002423 ORTHO05D007137 3.2e-06 56.2 66 53.0


User provided reference genes

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