Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 0.0e+00 1406.3 724 100.0
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 0.0e+00 1139.4 678 80.5
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 5.4e-301 1037.3 775 65.9
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 3.5e-300 1034.6 719 69.5
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 3.5e-300 1034.6 707 71.4
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 1.3e-299 1032.7 628 78.0
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 6.4e-294 1013.8 709 68.0
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 5.1e-291 1004.2 763 64.7
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 9.6e-290 1000.0 640 77.0
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 3.3e-282 974.9 608 73.7
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 9.6e-282 973.4 578 76.8
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 8.1e-281 970.3 589 74.7
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 8.1e-281 970.3 666 71.0
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 1.2e-279 966.5 663 70.6
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 1.3e-278 963.0 648 71.0
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 1.7e-278 962.6 576 77.3
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 4.9e-278 961.1 650 71.4
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 9.3e-277 956.8 594 73.6
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 9.3e-277 956.8 666 70.7
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 4.6e-276 954.5 598 73.4
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 4.6e-276 954.5 594 73.7
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 1.0e-275 953.4 797 61.5
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 1.8e-275 952.6 579 75.6
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 3.9e-275 951.4 591 73.4
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 9.6e-274 946.8 655 69.8
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 8.2e-273 943.7 593 73.0
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 2.5e-269 932.2 613 69.7
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 4.2e-269 931.4 598 73.4
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 4.2e-269 931.4 646 68.0
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 5.5e-269 931.0 647 69.4
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 1.2e-268 929.9 577 73.0
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 4.6e-268 927.9 699 64.9
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 2.3e-267 925.6 577 72.4
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 3.9e-267 924.9 683 64.4
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 1.1e-266 923.3 596 71.1
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 2.5e-266 922.2 774 60.6
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 4.3e-266 921.4 608 70.2
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 2.8e-265 918.7 651 66.7
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 8.2e-265 917.1 581 72.1
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 1.4e-264 916.4 627 68.4
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 1.4e-264 916.4 597 70.9
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 3.1e-264 915.2 618 68.6
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 5.3e-264 914.4 587 72.2
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 3.4e-263 911.8 594 71.0
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 5.9e-263 911.0 587 71.6
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 2.1e-260 902.5 619 67.5
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 2.7e-260 902.1 594 69.9
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 2.7e-260 902.1 592 69.4
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 2.7e-260 902.1 670 68.1
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.8e-259 899.4 594 70.0
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 8.8e-259 897.1 602 68.8
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 2.8e-257 892.1 735 61.1
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 1.4e-256 889.8 618 67.0
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 2.0e-255 885.9 603 68.3
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 5.0e-254 881.3 597 68.5
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 3.3e-250 868.6 593 67.8
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 3.3e-250 868.6 820 55.1
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 9.7e-250 867.1 509 83.9
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 3.7e-249 865.1 528 74.4
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 4.1e-248 861.7 683 63.4
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 4.1e-248 861.7 652 63.3
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 9.1e-248 860.5 599 67.1
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 1.3e-246 856.7 599 66.8
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 2.9e-246 855.5 593 67.1
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 1.1e-245 853.6 519 75.1
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 1.2e-244 850.1 709 62.1
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 1.6e-244 849.7 540 74.1
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 1.1e-242 843.6 521 72.9
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 9.7e-242 840.5 600 65.5
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 2.2e-241 839.3 571 72.9
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 2.4e-240 835.9 594 67.0
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.0e-238 830.5 580 69.1
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 8.0e-236 820.8 538 70.6
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 1.2e-234 817.0 568 68.8
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 4.4e-234 815.1 534 70.8
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.2e-226 790.4 646 61.6
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 1.4e-224 783.5 487 72.7
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 2.7e-223 779.2 668 59.3
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 5.4e-216 755.0 537 68.3
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 5.9e-215 751.5 515 67.6
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 6.6e-214 748.0 624 59.1
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 3.4e-210 735.7 647 59.4
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.2e-208 729.2 529 66.2
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.3e-205 719.2 527 65.3
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 1.5e-202 710.3 494 67.4
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 2.4e-200 703.0 593 58.7
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 5.6e-197 691.8 763 51.5
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 8.9e-195 684.5 584 58.4
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 5.4e-192 675.2 597 57.1
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 3.9e-190 669.1 460 67.2
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 8.6e-190 667.9 387 76.7
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 2.8e-188 662.9 511 65.4
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 4.2e-184 649.0 451 71.2
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 9.3e-184 647.9 415 72.0
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 4.6e-183 645.6 671 53.9
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 3.3e-165 586.3 566 55.5
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 3.0e-142 510.0 598 46.5
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 6.3e-140 502.3 361 66.8
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 1.3e-132 478.0 383 59.3
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 2.2e-116 424.1 285 70.2
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.4e-109 400.2 316 61.4
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 2.7e-90 337.4 209 70.3
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 3.3e-80 303.9 302 52.0
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.2e-77 295.4 186 70.4
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 5.8e-77 293.1 308 54.2
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 4.7e-71 273.5 167 70.7
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 8.7e-65 252.7 158 69.6
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.4e-62 245.4 649 30.2
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 6.4e-60 236.5 225 57.8
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 4.3e-56 223.8 219 50.2
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 1.3e-49 202.2 195 55.4
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 1.1e-46 192.6 235 43.4
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.3e-41 175.6 119 71.4
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 6.7e-41 173.3 677 26.1
Glyma.11G176306 Glycine max HOM05D005348 ORTHO05D006635 8.7e-41 172.9 91 80.2
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 8.2e-39 166.4 94 69.1
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 9.0e-38 162.9 498 25.5
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 2.0e-37 161.8 115 65.2
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 6.1e-34 150.2 123 57.7
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 2.5e-32 144.8 108 66.7
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 4.3e-32 144.1 328 29.3
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 5.7e-32 143.7 554 24.2
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.3e-31 142.5 135 57.8
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 4.8e-31 140.6 80 80.0
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 1.5e-29 135.6 511 24.3
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 4.5e-29 134.0 174 48.3
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 2.1e-26 125.2 126 57.9
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 1.0e-25 122.9 87 55.2
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.9e-25 120.9 70 74.3
arahy.Tifrunner.gnm1.ann1.AXGL4F Arachis hypogaea HOM05D005348 ORTHO05D006635 4.7e-18 97.4 59 71.2
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.9e-17 94.4 96 58.3
CsaV3_6G021380 Cucumis sativus L. HOM05D005348 ORTHO05D006635 1.7e-15 89.0 137 38.0
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 2.6e-13 81.6 42 78.6


User provided reference genes

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