Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35949 Striga asiatica HOM05D012638 ORTHO05D002272 1.7e-216 755.7 392 100.0
SalBow1G2737 Salvia bowleyana HOM05D012638 ORTHO05D002272 2.3e-56 223.8 436 41.7
Oeu009176.1 Olea europaea HOM05D012638 ORTHO05D002272 4.9e-38 162.9 402 33.3
Migut.E01098 Erythranthe guttata HOM05D012638 ORTHO05D002272 1.2e-25 121.7 188 44.7
Dinv37647 Davidia involucrata HOM05D002972 ORTHO05D002272 1.1e-24 118.6 181 39.2
PGSC0003DMG401012214 Solanum tuberosum HOM05D012638 ORTHO05D002272 2.8e-17 94.0 227 31.7
Nitab4.5_0003441g0060 Nicotiana tabacum HOM05D012638 ORTHO05D002272 6.2e-17 92.8 138 42.0
CAN.G774.15 Capsicum annuum HOM05D012638 ORTHO05D002272 5.8e-15 86.3 158 38.6
Nitab4.5_0000580g0290 Nicotiana tabacum HOM05D012638 ORTHO05D002272 7.6e-15 85.9 115 45.2
CAN.G774.16 Capsicum annuum HOM05D012638 ORTHO05D002272 2.2e-14 84.3 158 40.5
CAN.G774.17 Capsicum annuum HOM05D012638 ORTHO05D002272 3.8e-14 83.6 115 45.2
Duzib147G1519 Durio zibethinus HOM05D000126 ORTHO05D000085 1.1e-13 82.0 171 29.2
Duzib264G0210 Durio zibethinus HOM05D000126 ORTHO05D000085 2.4e-13 80.9 171 29.8
Thecc.01G020000 Theobroma cacao HOM05D000126 ORTHO05D000085 1.2e-12 78.6 174 28.7
CAN.G474.14 Capsicum annuum HOM05D012638 ORTHO05D002272 4.6e-12 76.6 299 27.4
COL.COLO4_21920 Corchorus olitorius HOM05D000126 ORTHO05D002272 1.3e-11 75.1 172 29.7
SGA_v2.0_scaffold479G52246 Striga asiatica HOM05D012638 ORTHO05D002272 1.9e-10 71.2 84 54.8
Gorai.007G195600 Gossypium raimondii HOM05D000126 ORTHO05D000085 9.6e-10 68.9 170 27.6
Sopen08g029290 Solanum pennellii HOM05D012638 ORTHO05D002272 9.6e-10 68.9 148 33.8
Gohir.A11G175900 Gossypium hirsutum HOM05D000126 ORTHO05D000085 2.8e-09 67.4 170 27.6
COL.COLO4_31237 Corchorus olitorius HOM05D005310 ORTHO05D006920 3.7e-09 67.0 160 27.5
Psat0s3155g0080 Pisum sativum HOM05D008992 ORTHO05D002272 1.1e-08 65.5 212 27.8
Psat0s921g0280 Pisum sativum HOM05D008992 ORTHO05D002272 1.4e-08 65.1 185 28.1
TPR.G6199 Trifolium pratense HOM05D008992 ORTHO05D002272 2.4e-08 64.3 268 23.9
Ciclev10028228m.g Citrus clementina HOM05D002972 ORTHO05D002272 3.1e-08 63.9 181 26.5
COL.COLO4_17698 Corchorus olitorius HOM05D002972 ORTHO05D002272 3.1e-08 63.9 171 31.0
Ciclev10025208m.g Citrus clementina HOM05D000126 ORTHO05D000085 4.0e-08 63.5 101 33.7
Lalb_Chr07g0190491 Lupinus albus HOM05D008992 ORTHO05D002272 5.3e-08 63.2 170 26.5
TPR.G6214 Trifolium pratense HOM05D008992 ORTHO05D002272 5.3e-08 63.2 199 25.6
CsaV3_2G016160 Cucumis sativus L. HOM05D002972 ORTHO05D002272 9.0e-08 62.4 152 30.9
Lalb_Chr07g0185621 Lupinus albus HOM05D008992 ORTHO05D002272 9.0e-08 62.4 175 26.3
PGSC0003DMG400002637 Solanum tuberosum HOM05D002972 ORTHO05D002272 1.2e-07 62.0 186 27.4
Duzib052G0730 Durio zibethinus HOM05D002972 ORTHO05D002272 1.5e-07 61.6 306 23.9
Solyc03g120360.1 Solanum lycopersicum HOM05D002972 ORTHO05D002272 1.5e-07 61.6 154 29.9
Cc07_g10090 Coffea canephora HOM05D002972 ORTHO05D002272 2.0e-07 61.2 169 28.4
TWI79G0168 Tripterygium wilfordii HOM05D002972 ORTHO05D002272 2.0e-07 61.2 118 31.4
ClCG02G004020 Citrullus lanatus HOM05D002972 ORTHO05D002272 2.6e-07 60.8 151 28.5
Duzib248G0175 Durio zibethinus HOM05D002972 ORTHO05D002272 2.6e-07 60.8 179 24.6
AL4G10090 Arabidopsis lyrata HOM05D002972 ORTHO05D002272 3.4e-07 60.5 185 25.4
Sopen03g039260 Solanum pennellii HOM05D002972 ORTHO05D002272 5.8e-07 59.7 154 29.2
Sed0017149 Sechium edule HOM05D002972 ORTHO05D002272 7.6e-07 59.3 221 24.9
Sp6g32370 Schrenkiella parvula HOM05D002972 ORTHO05D002272 9.9e-07 58.9 149 25.5
Cpa.g.sc10.98 Carica papaya HOM05D002972 ORTHO05D002272 1.3e-06 58.5 133 28.6
VMungo0251G0856 Vigna mungo HOM05D008992 ORTHO05D002272 1.3e-06 58.5 297 22.6
BolC3t15632H Brassica oleracea HOM05D002972 ORTHO05D002272 1.7e-06 58.2 178 25.8
CsaV3_7G001090 Cucumis sativus L. HOM05D002972 ORTHO05D002272 1.7e-06 58.2 176 29.0
Sed0018187 Sechium edule HOM05D002972 ORTHO05D002272 1.7e-06 58.2 179 27.4
AT2G20960 Arabidopsis thaliana HOM05D002972 ORTHO05D002272 2.2e-06 57.8 185 25.4
CARHR294290 Cardamine hirsuta HOM05D002972 ORTHO05D002272 2.2e-06 57.8 448 24.6
Thhalv10016060m.g Eutrema salsugineum HOM05D002972 ORTHO05D002272 2.2e-06 57.8 175 25.1
Lj4g0020153 Lotus japonicus HOM05D008992 ORTHO05D002272 2.2e-06 57.8 115 28.7
Manes.11G096900 Manihot esculenta HOM05D002972 ORTHO05D002272 2.2e-06 57.8 148 24.3
AL7G10450 Arabidopsis lyrata HOM05D002972 ORTHO05D002272 2.9e-06 57.4 156 26.9
Potri.009G136400 Populus trichocarpa HOM05D002972 ORTHO05D002272 2.9e-06 57.4 186 24.2
AL6G21760 Arabidopsis lyrata HOM05D002972 ORTHO05D002272 3.8e-06 57.0 157 26.1
MELO3C013346.2 Cucumis melo HOM05D002972 ORTHO05D002272 3.8e-06 57.0 138 27.5
TAR633G1264 Trochodendron aralioides HOM05D002972 ORTHO05D002272 4.9e-06 56.6 136 29.4
AT4G38560 Arabidopsis thaliana HOM05D002972 ORTHO05D002272 6.4e-06 56.2 156 26.9
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 6.4e-06 56.2 195 23.6
TWI75G0621 Tripterygium wilfordii HOM05D002972 ORTHO05D002272 6.4e-06 56.2 130 30.0
CARHR111850 Cardamine hirsuta HOM05D002972 ORTHO05D002272 8.4e-06 55.8 178 28.7
Medtr8g089530 Medicago truncatula HOM05D008992 ORTHO05D002272 8.4e-06 55.8 299 23.7


User provided reference genes

Program Settings