Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35940 Striga asiatica HOM05D002082 ORTHO05D002130 0.0e+00 1089.7 566 100.0
SGA_v2.0_scaffold479G52240 Striga asiatica HOM05D002082 ORTHO05D002130 9.6e-136 488.0 707 49.4
MSTRG.25617 Avicennia marina HOM05D002082 ORTHO05D002130 3.2e-38 164.1 280 40.4
Migut.A00735 Erythranthe guttata HOM05D002082 ORTHO05D002130 9.2e-38 162.5 304 39.8
MSTRG.11980 Avicennia marina HOM05D002082 ORTHO05D002130 3.3e-35 154.1 194 47.4
Oeu009151.1 Olea europaea HOM05D002082 ORTHO05D002130 2.2e-31 141.4 232 41.8
SGA_v2.0_scaffold173G39174 Striga asiatica HOM05D002082 ORTHO05D002130 9.6e-27 125.9 317 33.4
SalBow1G8374 Salvia bowleyana HOM05D002082 ORTHO05D002130 3.4e-24 117.5 325 36.3
Oeu011042.2 Olea europaea HOM05D002082 ORTHO05D002130 5.4e-22 110.2 282 34.8
unitig_0.g2857 Utricularia gibba HOM05D002082 ORTHO05D002130 7.1e-22 109.8 278 32.7
Nitab4.5_0000678g0100 Nicotiana tabacum HOM05D002082 ORTHO05D002130 1.5e-16 92.0 268 30.2
FAN04G2070 Fragaria x ananassa HOM05D002082 ORTHO05D002130 4.5e-16 90.5 285 28.8
Dinv37634 Davidia involucrata HOM05D002082 ORTHO05D002130 2.2e-15 88.2 258 32.6
PGSC0003DMG400012204 Solanum tuberosum HOM05D002082 ORTHO05D002130 3.8e-15 87.4 229 30.1
Peaxi162Scf00119g00948 Petunia axillaris HOM05D002082 ORTHO05D002130 6.4e-15 86.7 282 31.2
FvH4_5g02600 Fragaria vesca HOM05D002082 ORTHO05D002130 2.4e-14 84.7 296 27.4
Solyc08g081160.3 Solanum lycopersicum HOM05D002082 ORTHO05D002130 2.4e-14 84.7 229 29.3
Prupe.5G101000 Prunus persica HOM05D002082 ORTHO05D002130 3.2e-14 84.3 275 27.6
CSS0003251 Camellia sinensis var. sinensis HOM05D002082 ORTHO05D002130 4.2e-14 84.0 248 30.6
Sopen08g029460 Solanum pennellii HOM05D002082 ORTHO05D002130 4.2e-14 84.0 229 29.3
FAN18G2062 Fragaria x ananassa HOM05D002082 ORTHO05D002130 9.3e-14 82.8 305 26.9
FAN13G1469 Fragaria x ananassa HOM05D002082 ORTHO05D002130 1.6e-13 82.0 305 26.6
FAN08G0625 Fragaria x ananassa HOM05D002082 ORTHO05D002130 2.1e-13 81.6 285 27.0
RcHm_v2.0_Chr7g0197501 Rosa chinensis HOM05D002082 ORTHO05D002130 2.1e-13 81.6 271 26.2
MD06G1085000 Malus domestica HOM05D002082 ORTHO05D002130 4.6e-13 80.5 254 27.6
Cc08_g14810 Coffea canephora HOM05D002082 ORTHO05D002130 6.0e-13 80.1 225 30.7
unitig_46.g18549 Utricularia gibba HOM05D002082 ORTHO05D002130 1.0e-12 79.3 390 27.9
CSS0011549 Camellia sinensis var. sinensis HOM05D002082 ORTHO05D002130 1.3e-12 79.0 244 29.9
MD14G1105800 Malus domestica HOM05D002082 ORTHO05D002130 1.8e-12 78.6 467 24.0
Nitab4.5_0006762g0010 Nicotiana tabacum HOM05D002082 ORTHO05D002130 3.0e-12 77.8 227 31.3
Oeu052948.3 Olea europaea HOM05D002082 ORTHO05D002130 3.9e-12 77.4 237 30.4
SalBow1G3955 Salvia bowleyana HOM05D002082 ORTHO05D002130 3.9e-12 77.4 188 37.2
Thecc.03G279700 Theobroma cacao HOM05D002082 ORTHO05D002130 8.7e-12 76.3 244 29.5
Actinidia10009 Actinidia chinensis HOM05D002082 ORTHO05D002130 1.5e-11 75.5 295 28.1
TAR375G0315 Trochodendron aralioides HOM05D002082 ORTHO05D002130 1.9e-11 75.1 270 30.0
COL.COLO4_34473 Corchorus olitorius HOM05D002082 ORTHO05D002130 2.5e-11 74.7 251 27.5
Gohir.D12G230900 Gossypium hirsutum HOM05D002082 ORTHO05D002130 2.5e-11 74.7 296 26.4
Gohir.A12G229800 Gossypium hirsutum HOM05D002082 ORTHO05D002130 5.6e-11 73.6 253 27.7
Gorai.008G247100 Gossypium raimondii HOM05D002082 ORTHO05D002130 1.3e-10 72.4 296 25.7
CiPaw.02G031000 Carya illinoinensis HOM05D002082 ORTHO05D002130 1.6e-10 72.0 293 28.3
RcHm_v2.0_Chr1g0355281 Rosa chinensis HOM05D002082 ORTHO05D002130 1.6e-10 72.0 225 28.9
QL12p032830 Quercus lobata HOM05D002082 ORTHO05D002130 2.1e-10 71.6 286 27.6
TAR636G0944 Trochodendron aralioides HOM05D002082 ORTHO05D002130 2.1e-10 71.6 232 28.9
unitig_22.g5354 Utricularia gibba HOM05D002082 ORTHO05D002130 2.8e-10 71.2 223 27.8
Atru.chr9.2180 Acer truncatum HOM05D002082 ORTHO05D002130 3.7e-10 70.9 250 28.0
Actinidia20902 Actinidia chinensis HOM05D002082 ORTHO05D002130 3.7e-10 70.9 282 27.3
Cc02_g38040 Coffea canephora HOM05D002082 ORTHO05D002130 4.8e-10 70.5 303 27.4
CiPaw.01G061400 Carya illinoinensis HOM05D002082 ORTHO05D002130 6.2e-10 70.1 235 28.9
CANSAT56G1625 Cannabis sativa HOM05D002082 ORTHO05D002130 8.1e-10 69.7 245 29.8
Duzib205G1702 Durio zibethinus HOM05D002082 ORTHO05D002130 8.1e-10 69.7 230 27.4
Lj7A512T28 Lonicera japonica HOM05D002082 ORTHO05D002130 8.1e-10 69.7 233 30.9
Peaxi162Scf00020g00328 Petunia axillaris HOM05D002082 ORTHO05D002130 8.1e-10 69.7 245 29.4
Cfa012223 Carpinus fangiana HOM05D002082 ORTHO05D002130 1.4e-09 68.9 367 25.9
Duzib068G0569 Durio zibethinus HOM05D002082 ORTHO05D002130 1.8e-09 68.6 249 29.3
TWI14G1346 Tripterygium wilfordii HOM05D002082 ORTHO05D002130 1.8e-09 68.6 242 28.9
Actinidia33420 Actinidia chinensis HOM05D002082 ORTHO05D002130 2.4e-09 68.2 311 27.7
MD01G1060800 Malus domestica HOM05D002082 ORTHO05D002130 2.4e-09 68.2 288 27.1
ECA234G4153 Erigeron canadensis HOM05D002082 ORTHO05D002130 3.1e-09 67.8 260 26.9
Gohir.D08G201600 Gossypium hirsutum HOM05D002082 ORTHO05D011139 5.3e-09 67.0 183 25.7
Ciclev10018878m.g Citrus clementina HOM05D002082 ORTHO05D002130 6.9e-09 66.6 158 32.9
Nitab4.5_0000583g0100 Nicotiana tabacum HOM05D002082 ORTHO05D002130 6.9e-09 66.6 285 28.8
Ciclev10018716m.g Citrus clementina HOM05D002082 ORTHO05D002130 9.0e-09 66.2 283 28.3
FAN10G2557 Fragaria x ananassa HOM05D002082 ORTHO05D002130 9.0e-09 66.2 223 28.3
FAN10G2676 Fragaria x ananassa HOM05D002082 ORTHO05D002130 9.0e-09 66.2 223 28.3
Gorai.004G212500 Gossypium raimondii HOM05D002082 ORTHO05D011139 9.0e-09 66.2 183 25.7
Potri.002G160000 Populus trichocarpa HOM05D002082 ORTHO05D002130 9.0e-09 66.2 223 26.9
Rhsim07G0090300 Rhododendron simsii HOM05D002082 ORTHO05D002130 9.0e-09 66.2 389 27.0
FAN03G3385 Fragaria x ananassa HOM05D002082 ORTHO05D002130 1.2e-08 65.9 223 28.3
Dinv32485 Davidia involucrata HOM05D002082 ORTHO05D002130 1.5e-08 65.5 325 26.8
Aqoxy7G00305 Aquilegia oxysepala HOM05D002082 ORTHO05D002130 3.4e-08 64.3 230 28.7
FAN06G2330 Fragaria x ananassa HOM05D002082 ORTHO05D002130 3.4e-08 64.3 223 27.8
FAN06G4139 Fragaria x ananassa HOM05D002082 ORTHO05D002130 3.4e-08 64.3 223 27.8
Gohir.A08G183050 Gossypium hirsutum HOM05D002082 ORTHO05D011139 3.4e-08 64.3 183 24.0
Cpa.g.sc74.55 Carica papaya HOM05D002082 ORTHO05D002130 9.9e-08 62.8 283 23.3
Sabra02G0127000 Salix brachista HOM05D002082 ORTHO05D002130 9.9e-08 62.8 311 26.7
Haze_15507 Corylus avellana HOM05D002082 ORTHO05D002130 1.3e-07 62.4 283 26.9
Atru.chr5.499 Acer truncatum HOM05D002082 ORTHO05D002130 1.7e-07 62.0 282 25.9
Manes.01G059400 Manihot esculenta HOM05D002082 ORTHO05D002130 1.7e-07 62.0 292 26.4
Manes.02G019700 Manihot esculenta HOM05D002082 ORTHO05D002130 1.7e-07 62.0 276 23.6
AL1G10670 Arabidopsis lyrata HOM05D002082 ORTHO05D002130 2.2e-07 61.6 173 31.8
FvH4_7g14290 Fragaria vesca HOM05D002082 ORTHO05D002130 2.2e-07 61.6 223 27.4
MD07G1136900 Malus domestica HOM05D002082 ORTHO05D002130 2.2e-07 61.6 351 25.1
PGR031G0369 Punica granatum HOM05D002082 ORTHO05D002130 2.2e-07 61.6 248 25.4
VMungo0331G0247 Vigna mungo HOM05D002082 ORTHO05D002130 2.9e-07 61.2 231 29.0
Gohir.D09G199500 Gossypium hirsutum HOM05D002082 ORTHO05D002130 3.8e-07 60.8 311 27.0
Gorai.006G223200 Gossypium raimondii HOM05D002082 ORTHO05D002130 3.8e-07 60.8 311 26.7
Oeu053748.1 Olea europaea HOM05D002082 ORTHO05D002130 3.8e-07 60.8 360 24.7
arahy.Tifrunner.gnm1.ann1.H5386A Arachis hypogaea HOM05D002082 ORTHO05D002130 4.9e-07 60.5 251 27.5
DCAR_006930 Daucus carota HOM05D002082 ORTHO05D002130 4.9e-07 60.5 225 25.8
Eucgr.E00135 Eucalyptus grandis HOM05D002082 ORTHO05D002130 4.9e-07 60.5 232 26.7
Cfa003924 Carpinus fangiana HOM05D002082 ORTHO05D002130 6.4e-07 60.1 262 26.3
vmacro13960 Vaccinium macrocarpon HOM05D002082 ORTHO05D002130 6.4e-07 60.1 384 25.8
Dinv43817 Davidia involucrata HOM05D002082 ORTHO05D002130 1.1e-06 59.3 325 26.2
MBI18_g06450_MAGBIO Magnolia biondii HOM05D002082 ORTHO05D002130 1.1e-06 59.3 226 26.1
Actinidia12703 Actinidia chinensis HOM05D002082 ORTHO05D002130 1.4e-06 58.9 361 26.9
Manes.05G034100 Manihot esculenta HOM05D002082 ORTHO05D002130 1.4e-06 58.9 264 27.3
TWI23G1246 Tripterygium wilfordii HOM05D002082 ORTHO05D002130 1.4e-06 58.9 244 26.2
AT1G01695 Arabidopsis thaliana HOM05D002082 ORTHO05D002130 1.9e-06 58.5 163 31.3
MBI17_g24689_MAGBIO Magnolia biondii HOM05D002082 ORTHO05D002130 1.9e-06 58.5 283 27.9
Eucgr.E00627 Eucalyptus grandis HOM05D002082 ORTHO05D002130 2.4e-06 58.2 160 30.6
CANSAT21G1957 Cannabis sativa HOM05D002082 ORTHO05D002130 3.2e-06 57.8 532 24.6
Nn6g33418 Nelumbo nucifera HOM05D002082 ORTHO05D002130 5.5e-06 57.0 164 26.8
CANSAT56G4299 Cannabis sativa HOM05D002082 ORTHO05D002130 7.1e-06 56.6 549 23.7
Prupe.2G170700 Prunus persica HOM05D002082 ORTHO05D002130 7.1e-06 56.6 374 25.7
COL.COLO4_20185 Corchorus olitorius HOM05D002082 ORTHO05D002130 9.3e-06 56.2 330 26.1
Lalb_Chr17g0339601 Lupinus albus HOM05D002082 ORTHO05D002130 9.3e-06 56.2 178 28.1
Manes.01G256600 Manihot esculenta HOM05D002082 ORTHO05D002130 9.3e-06 56.2 288 25.7
Nitab4.5_0001615g0070 Nicotiana tabacum HOM05D002082 ORTHO05D002130 9.3e-06 56.2 582 23.4
SGA_v2.0_scaffold35G14232 Striga asiatica HOM05D002515 ORTHO05D002722 9.3e-06 56.2 122 27.0


User provided reference genes

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