Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35930 Striga asiatica HOM05D001451 ORTHO05D405195 4.6e-49 197.6 101 100.0
SGA_v2.0_scaffold48G18080 Striga asiatica HOM05D001451 ORTHO05D001338 6.1e-09 64.3 37 83.8
MSTRG.1856 Avicennia marina HOM05D001451 ORTHO05D001338 6.7e-08 60.8 37 78.4
Duzib068G0826 Durio zibethinus HOM05D001451 ORTHO05D001338 6.7e-08 60.8 38 78.9
CSS0033688 Camellia sinensis var. sinensis HOM05D001451 ORTHO05D001338 8.8e-08 60.5 37 78.4
CSS0049469 Camellia sinensis var. sinensis HOM05D001451 ORTHO05D001338 8.8e-08 60.5 37 78.4
Thecc.03G281600 Theobroma cacao HOM05D001451 ORTHO05D001338 5.7e-07 57.8 38 73.7
Gohir.A11G022700 Gossypium hirsutum HOM05D001451 ORTHO05D001338 7.5e-07 57.4 38 73.7
Gohir.D11G022300 Gossypium hirsutum HOM05D001451 ORTHO05D001338 7.5e-07 57.4 38 73.7
Gorai.007G023700 Gossypium raimondii HOM05D001451 ORTHO05D001338 7.5e-07 57.4 38 73.7
ECA246G2442 Erigeron canadensis HOM05D000773 ORTHO05D000588 9.7e-07 57.0 37 73.0
Nn1g01576 Nelumbo nucifera HOM05D001451 ORTHO05D001338 9.7e-07 57.0 37 73.0
Oeu019181.2 Olea europaea HOM05D001451 ORTHO05D001338 9.7e-07 57.0 41 65.9
Cc08_g14940 Coffea canephora HOM05D001451 ORTHO05D001338 1.3e-06 56.6 36 77.8
COL.COLO4_34491 Corchorus olitorius HOM05D001451 ORTHO05D001338 1.7e-06 56.2 38 71.1
Hund27262 Selenicereus undatus HOM05D000052 ORTHO05D001338 1.7e-06 56.2 38 68.4
Potri.002G161000 Populus trichocarpa HOM05D001451 ORTHO05D001338 2.2e-06 55.8 37 73.0
Cfa012208 Carpinus fangiana HOM05D001451 ORTHO05D001338 3.7e-06 55.1 37 70.3
PGR031G3035 Punica granatum HOM05D001451 ORTHO05D001338 3.7e-06 55.1 38 63.2
Rhsim07G0013400 Rhododendron simsii HOM05D001451 ORTHO05D001338 4.8e-06 54.7 38 65.8
Sabra14G0062800 Salix brachista HOM05D001451 ORTHO05D001338 4.8e-06 54.7 37 70.3
Glyma.07G069300 Glycine max HOM05D001451 ORTHO05D001338 6.3e-06 54.3 37 67.6
Glyma.09G257800 Glycine max HOM05D001451 ORTHO05D001338 6.3e-06 54.3 38 63.2
Glyma.18G234800 Glycine max HOM05D001451 ORTHO05D001338 6.3e-06 54.3 38 63.2
Lalb_Chr10g0096841 Lupinus albus HOM05D001451 ORTHO05D001338 8.2e-06 53.9 37 67.6
Potri.014G086600 Populus trichocarpa HOM05D001451 ORTHO05D001338 8.2e-06 53.9 37 70.3


User provided reference genes

Program Settings