Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-134 481.5 237 100.0
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 7.7e-71 271.2 132 96.2
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-69 266.2 130 97.7
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-54 216.1 152 65.8
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-53 213.4 132 73.5
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-52 209.1 132 72.0
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-52 208.4 131 71.8
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-52 208.4 131 71.8
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 6.8e-51 204.9 132 72.0
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-48 196.1 102 91.2
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-45 185.3 116 74.1
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-44 181.8 101 83.2
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 6.8e-43 178.3 140 58.6
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-41 173.3 106 76.4
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-38 163.7 91 81.3
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-37 159.5 92 79.3
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-36 156.0 131 55.0
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-33 145.6 106 66.0
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-31 139.0 132 51.5
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-29 134.0 79 84.8
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-29 132.5 131 50.4
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-28 128.6 130 48.5
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-26 124.4 127 41.7
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-26 124.0 125 44.8
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 7.6e-26 121.7 126 43.7
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-25 120.9 130 45.4
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 8.3e-25 118.2 130 42.3
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 3.2e-24 116.3 121 45.5
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-23 114.0 108 50.9
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-23 112.8 128 42.2
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-23 112.5 131 42.0
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-23 112.1 137 40.9
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-20 102.1 121 42.1
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-19 101.3 128 35.2
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-19 101.3 89 49.4
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-19 101.3 128 41.4
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-19 100.1 103 46.6
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 4.0e-19 99.4 120 37.5
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-19 99.4 128 39.8
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 5.2e-19 99.0 138 37.0
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.4e-18 96.3 120 39.2
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 8.4e-17 91.7 81 54.3
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-15 86.7 62 67.7
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-15 85.1 62 58.1
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 6.6e-14 82.0 129 32.6
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 8.7e-14 81.6 82 52.4
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 1.9e-13 80.5 137 34.3
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-13 78.6 122 32.8
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 4.8e-12 75.9 59 50.8
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 1.4e-11 74.3 105 32.4
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-11 73.6 82 45.1
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 9.0e-11 71.6 69 40.6
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 1.2e-10 71.2 120 34.2
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-10 71.2 109 33.9
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 2.0e-10 70.5 109 33.9
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 3.4e-10 69.7 97 33.0
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 4.4e-10 69.3 109 33.0
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 5.8e-10 68.9 114 32.5
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 5.8e-10 68.9 109 32.1
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 2.2e-09 67.0 136 27.2
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-09 67.0 105 33.3
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 2.9e-09 66.6 109 31.2
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 3.8e-09 66.2 109 32.1
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.9e-09 65.9 123 27.6
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 6.4e-09 65.5 103 30.1
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 6.4e-09 65.5 109 32.1
Nitab4.5_0003011g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-08 64.7 110 30.9
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-08 64.7 128 31.2
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-08 64.7 108 40.7
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 1.4e-08 64.3 146 21.9
Peaxi162Scf00047g00443 Petunia axillaris HOM05D002261 ORTHO05D002334 1.4e-08 64.3 110 37.3
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 3.2e-08 63.2 123 26.8
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 4.2e-08 62.8 94 25.5
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-08 62.8 45 62.2
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 5.4e-08 62.4 110 30.9
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 7.1e-08 62.0 109 28.4
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 7.1e-08 62.0 110 30.9
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 7.1e-08 62.0 43 67.4
Peaxi162Scf00795g00069 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-07 61.2 101 32.7
SGA_v2.0_scaffold68G23014 Striga asiatica HOM05D000096 ORTHO05D000045 1.2e-07 61.2 79 41.8
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-07 60.8 40 67.5
Nitab4.5_0001568g0120 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-07 60.5 109 29.4
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 2.7e-07 60.1 127 30.7
Peaxi162Scf00951g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-07 60.1 131 28.2
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 4.6e-07 59.3 127 29.9
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 7.9e-07 58.5 127 29.9
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 1.7e-06 57.4 105 28.6
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 2.3e-06 57.0 122 29.5
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 3.9e-06 56.2 125 27.2
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 5.1e-06 55.8 91 31.9
Dinv11979 Davidia involucrata HOM05D006612 ORTHO05D009014 6.6e-06 55.5 91 30.8
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 6.6e-06 55.5 109 29.4


User provided reference genes

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