Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 8.0e-91 337.0 165 100.0
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 1.8e-58 229.6 165 68.5
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 4.0e-58 228.4 165 69.1
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 9.8e-57 223.8 168 67.9
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 4.9e-56 221.5 163 68.1
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 1.9e-55 219.5 165 66.1
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 2.0e-54 216.1 165 67.3
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 6.0e-54 214.5 165 63.6
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 1.3e-53 213.4 165 66.7
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 5.0e-53 211.5 165 63.0
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 5.0e-53 211.5 165 63.0
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 6.6e-53 211.1 165 63.6
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 1.5e-52 209.9 165 63.6
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 1.9e-52 209.5 165 63.6
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 1.9e-52 209.5 165 62.4
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 4.3e-52 208.4 165 62.4
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 4.3e-52 208.4 165 63.6
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 4.3e-52 208.4 166 63.3
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 9.5e-52 207.2 165 63.0
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 1.6e-51 206.5 165 60.0
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 2.8e-51 205.7 165 61.2
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 2.8e-51 205.7 165 61.2
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 3.6e-51 205.3 165 61.8
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 3.6e-51 205.3 164 61.0
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 3.6e-51 205.3 165 61.8
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 4.7e-51 204.9 163 62.0
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 8.1e-51 204.1 163 62.0
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 1.4e-50 203.4 165 60.6
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 1.8e-50 203.0 165 61.8
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 2.3e-50 202.6 165 60.6
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 2.3e-50 202.6 165 60.6
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 2.3e-50 202.6 165 63.0
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 2.3e-50 202.6 165 60.6
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.2e-49 200.3 165 63.0
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.2e-49 200.3 165 61.2
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 1.2e-49 200.3 181 60.2
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 2.0e-49 199.5 165 60.0
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 2.0e-49 199.5 163 62.0
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 2.6e-49 199.1 162 62.3
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 2.6e-49 199.1 163 60.7
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 4.4e-49 198.4 165 60.6
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 4.4e-49 198.4 165 60.6
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 5.8e-49 198.0 165 60.0
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 7.5e-49 197.6 161 60.9
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 9.8e-49 197.2 165 60.0
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 1.3e-48 196.8 166 64.5
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 1.7e-48 196.4 163 61.3
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 2.2e-48 196.1 165 60.0
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 2.9e-48 195.7 213 50.7
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 2.9e-48 195.7 165 60.6
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 2.9e-48 195.7 165 60.0
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 3.7e-48 195.3 165 59.4
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 3.7e-48 195.3 163 58.3
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 3.7e-48 195.3 175 58.3
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 6.4e-48 194.5 166 60.2
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 6.4e-48 194.5 171 60.2
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 8.3e-48 194.1 153 62.1
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 1.1e-47 193.7 170 58.8
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 1.1e-47 193.7 168 60.1
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 1.1e-47 193.7 165 60.6
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.9e-47 193.0 189 54.0
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 2.4e-47 192.6 163 57.7
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 2.4e-47 192.6 165 58.8
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 3.2e-47 192.2 165 58.2
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 3.2e-47 192.2 165 56.4
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 5.4e-47 191.4 189 53.4
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 5.4e-47 191.4 166 62.0
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 7.1e-47 191.0 165 57.6
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 1.6e-46 189.9 165 55.8
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 2.1e-46 189.5 165 57.0
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 2.7e-46 189.1 165 58.2
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 3.5e-46 188.7 165 57.0
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 4.6e-46 188.3 165 56.4
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 4.6e-46 188.3 165 55.2
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 7.8e-46 187.6 203 51.7
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 1.7e-45 186.4 165 57.0
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 3.9e-45 185.3 165 56.4
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 3.9e-45 185.3 165 56.4
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 6.6e-45 184.5 165 55.2
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 6.6e-45 184.5 162 54.9
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 1.1e-44 183.7 166 55.4
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 2.5e-44 182.6 166 57.2
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 1.6e-43 179.9 166 54.8
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 1.6e-43 179.9 166 54.8
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 2.8e-43 179.1 161 54.7
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 1.4e-42 176.8 152 58.6
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.8e-42 176.4 166 53.6
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 4.0e-42 175.3 158 54.4
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 2.9e-40 169.1 151 56.3
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 1.9e-39 166.4 164 51.8
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 4.1e-39 165.2 137 60.6
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 6.0e-38 161.4 162 48.8
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 1.7e-37 159.8 147 56.5
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 1.1e-36 157.1 131 63.4
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 2.8e-35 152.5 100 72.0
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 3.8e-32 142.1 94 70.2
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 1.2e-30 137.1 134 50.7
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 1.0e-29 134.0 103 64.1
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 1.1e-28 130.6 165 48.5
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 1.6e-27 126.7 111 55.0
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 8.7e-21 104.4 64 78.1
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.1e-20 104.0 65 76.9
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 1.1e-18 97.4 103 50.5
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.1e-18 97.4 66 68.2
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 4.0e-18 95.5 162 31.5
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.9e-15 86.7 99 49.5
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 2.1e-14 83.2 66 63.6
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 2.7e-14 82.8 168 30.4
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 6.7e-13 78.2 140 38.6
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.8e-11 72.0 45 66.7
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 9.0e-10 67.8 157 26.8
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.2e-09 67.4 95 38.9
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 5.8e-09 65.1 44 70.5
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 3.8e-08 62.4 38 73.7
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 3.5e-06 55.8 83 36.1


User provided reference genes

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