Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 9.2e-156 553.5 279 100.0
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 8.1e-112 407.5 275 75.3
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.2e-107 393.7 279 73.5
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 7.9e-107 391.0 276 74.3
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 7.9e-107 391.0 275 76.0
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.8e-106 389.8 275 74.2
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 1.6e-104 383.3 281 70.8
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 8.1e-104 380.9 276 73.2
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 4.0e-103 378.6 277 72.2
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 5.3e-103 378.3 275 71.3
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.5e-102 376.7 277 72.2
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.0e-102 376.3 277 71.5
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 7.6e-102 374.4 277 70.4
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 1.3e-101 373.6 276 71.0
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 1.3e-101 373.6 276 71.0
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.9e-101 372.5 279 67.7
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 2.9e-101 372.5 309 65.4
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 4.9e-101 371.7 274 70.8
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 1.1e-100 370.5 278 69.4
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.9e-100 369.8 278 69.4
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.9e-100 369.8 282 69.5
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 3.2e-100 369.0 279 67.7
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 3.2e-100 369.0 277 67.1
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 3.2e-100 369.0 282 69.1
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 7.1e-100 367.9 282 68.8
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 9.3e-100 367.5 278 69.8
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 9.3e-100 367.5 274 70.4
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 2.1e-99 366.3 276 71.0
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 6.0e-99 364.8 281 68.0
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 1.3e-98 363.6 275 69.5
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.8e-98 363.2 276 70.7
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 1.8e-98 363.2 279 68.5
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 1.8e-98 363.2 276 70.3
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.8e-98 363.2 279 69.2
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 3.0e-98 362.5 277 70.8
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 5.1e-98 361.7 277 70.4
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 5.1e-98 361.7 277 69.3
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 5.1e-98 361.7 275 69.8
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 6.7e-98 361.3 275 70.2
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.1e-97 360.5 276 67.4
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 1.9e-97 359.8 274 67.9
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.9e-97 359.8 278 68.7
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 5.6e-97 358.2 277 67.1
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 5.6e-97 358.2 284 68.0
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 7.4e-97 357.8 274 70.8
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 9.6e-97 357.5 276 66.3
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 1.3e-96 357.1 273 68.5
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 1.6e-96 356.7 295 65.4
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.6e-96 356.7 282 65.6
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 2.8e-96 355.9 278 68.0
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 4.8e-96 355.1 275 68.4
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 6.2e-96 354.8 277 66.8
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 6.2e-96 354.8 273 68.1
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 6.2e-96 354.8 280 67.9
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 1.8e-95 353.2 275 66.9
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.8e-95 353.2 278 66.9
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 1.8e-95 353.2 280 67.9
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.8e-95 353.2 281 68.0
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 2.4e-95 352.8 283 66.8
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 3.1e-95 352.4 288 65.3
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.3e-93 347.1 282 66.7
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 3.8e-93 345.5 274 69.7
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 1.9e-92 343.2 281 65.8
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 2.5e-92 342.8 282 66.0
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 3.2e-92 342.4 278 66.2
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 3.2e-92 342.4 282 65.2
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 5.5e-92 341.7 278 65.5
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 5.5e-92 341.7 281 66.2
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 7.1e-92 341.3 281 65.8
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 7.1e-92 341.3 281 65.8
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 7.1e-92 341.3 281 65.8
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 7.1e-92 341.3 282 65.2
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 9.3e-92 340.9 277 65.7
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 9.3e-92 340.9 281 65.8
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.2e-91 340.5 286 64.7
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.2e-91 340.5 274 68.6
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.6e-91 340.1 278 65.5
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 2.7e-91 339.3 285 64.6
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 7.9e-91 337.8 279 64.2
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 1.0e-90 337.4 282 64.9
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.0e-90 335.9 274 68.6
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 5.7e-89 331.6 257 67.7
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 1.1e-87 327.4 294 60.9
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.4e-87 327.0 310 61.3
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.5e-86 323.6 276 62.7
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 3.9e-82 308.9 278 61.2
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 3.3e-81 305.8 278 61.2
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 5.7e-81 305.1 285 60.4
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 6.3e-80 301.6 351 53.0
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 9.1e-79 297.7 253 62.5
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 2.5e-76 289.7 256 60.2
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 3.2e-76 289.3 267 58.4
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 3.0e-66 256.1 518 36.3
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.1e-65 254.2 215 62.3
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 5.7e-65 251.9 275 50.2
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.0e-62 243.4 208 62.5
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 2.1e-59 233.4 192 64.6
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 2.7e-54 216.5 163 66.9
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 5.9e-54 215.3 159 67.3
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 4.0e-50 202.6 189 60.3
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-49 200.7 149 68.5
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 5.9e-46 188.7 200 55.0
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.8e-31 140.6 261 33.7
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 2.3e-29 133.7 213 44.1
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 4.3e-28 129.4 81 75.3
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 9.5e-28 128.3 96 70.8
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 3.6e-27 126.3 95 71.6
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 6.2e-27 125.6 95 70.5
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 2.2e-24 117.1 87 71.3
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 4.7e-19 99.4 140 47.1
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 1.1e-12 78.2 60 70.0
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 2.4e-10 70.5 148 31.1


User provided reference genes

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