Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 9.7e-71 270.8 229 100.0
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 3.1e-40 169.5 247 72.5
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.2e-38 163.3 250 70.8
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 3.1e-32 142.9 247 68.0
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 2.7e-28 129.8 252 65.1
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 4.6e-28 129.0 84 77.4
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.0e-27 127.9 71 85.9
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 1.0e-27 127.9 82 78.0
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.7e-27 127.1 240 65.4
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 1.7e-27 127.1 76 78.9
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.0e-27 126.3 253 61.7
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 5.1e-27 125.6 245 62.9
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.6e-27 125.2 241 58.1
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 8.6e-27 124.8 247 63.2
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 8.6e-27 124.8 81 74.1
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.5e-26 124.0 254 61.8
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 1.5e-26 124.0 237 66.2
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 5.6e-26 122.1 241 63.5
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 7.3e-26 121.7 247 65.2
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 9.5e-26 121.3 248 63.7
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.2e-25 120.9 71 80.3
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.2e-25 120.9 71 80.3
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 2.8e-25 119.8 79 73.4
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.6e-25 119.4 238 62.6
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 3.6e-25 119.4 78 73.1
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 4.7e-25 119.0 237 66.2
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 8.1e-25 118.2 79 73.4
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 8.1e-25 118.2 68 80.9
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 8.1e-25 118.2 71 78.9
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 8.1e-25 118.2 74 78.4
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 1.1e-24 117.9 68 82.4
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.8e-24 117.1 68 80.9
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 4.0e-24 115.9 80 68.8
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 5.2e-24 115.5 236 63.6
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 5.2e-24 115.5 71 76.1
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 6.8e-24 115.2 253 60.9
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 8.9e-24 114.8 235 64.3
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 8.9e-24 114.8 235 64.3
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 8.9e-24 114.8 69 76.8
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 8.9e-24 114.8 243 63.4
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 8.9e-24 114.8 70 74.3
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.2e-23 114.4 69 76.8
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.5e-23 114.0 73 76.7
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.5e-23 114.0 73 76.7
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 1.5e-23 114.0 249 62.7
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 2.0e-23 113.6 84 72.6
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.0e-23 113.6 235 65.1
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 2.0e-23 113.6 250 58.0
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 2.0e-23 113.6 69 76.8
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 2.6e-23 113.2 234 62.4
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.4e-23 112.8 69 76.8
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 5.8e-23 112.1 244 59.8
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 5.8e-23 112.1 69 75.4
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 7.6e-23 111.7 235 63.8
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 7.6e-23 111.7 235 63.8
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 7.6e-23 111.7 70 72.9
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 9.9e-23 111.3 239 62.8
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 9.9e-23 111.3 228 65.4
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 9.9e-23 111.3 235 64.7
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 9.9e-23 111.3 82 72.0
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.3e-22 110.9 78 73.1
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.3e-22 110.9 235 63.4
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 1.7e-22 110.5 73 69.9
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.7e-22 110.5 242 61.6
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.2e-22 110.2 74 68.9
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 2.9e-22 109.8 82 70.7
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 2.9e-22 109.8 74 78.4
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 2.9e-22 109.8 256 48.0
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 2.9e-22 109.8 244 63.9
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 2.9e-22 109.8 82 68.3
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 3.7e-22 109.4 70 75.7
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 3.7e-22 109.4 239 63.6
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 4.9e-22 109.0 230 66.1
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 8.3e-22 108.2 81 64.2
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 8.3e-22 108.2 233 62.7
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 8.3e-22 108.2 71 74.6
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 8.3e-22 108.2 70 72.9
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 1.4e-21 107.5 255 61.6
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.9e-21 107.1 69 72.5
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 1.9e-21 107.1 251 59.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.4e-21 106.7 234 60.7
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.4e-21 106.7 74 68.9
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.4e-21 106.7 236 64.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.4e-21 105.5 235 63.8
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 7.1e-21 105.1 237 59.5
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 9.2e-21 104.8 235 63.4
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 9.2e-21 104.8 253 58.5
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 9.2e-21 104.8 69 71.0
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 9.2e-21 104.8 81 67.9
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 1.2e-20 104.4 81 66.7
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 3.9e-19 99.4 85 63.5
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 3.3e-18 96.3 303 50.8
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 5.6e-18 95.5 79 59.5
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 2.1e-17 93.6 72 65.3
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 2.1e-17 93.6 74 68.9
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 3.6e-17 92.8 235 60.0
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.8e-16 90.5 72 63.9
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 3.1e-16 89.7 86 55.8
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 5.2e-16 89.0 68 64.7
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 7.1e-13 78.6 65 66.2
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.2e-12 77.8 62 59.7
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 4.6e-12 75.9 100 48.0
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 6.0e-12 75.5 64 59.4
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 3.9e-11 72.8 63 58.7
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.3e-10 69.7 34 91.2
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 5.6e-10 68.9 34 91.2
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 4.8e-09 65.9 200 61.0
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 8.1e-09 65.1 372 41.4
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.4e-08 64.3 45 62.2
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 2.4e-08 63.5 85 50.6
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 2.4e-08 63.5 67 44.8
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 5.3e-08 62.4 202 59.9
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 1.2e-07 61.2 34 79.4
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.5e-07 60.8 195 63.6
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.4e-07 59.7 36 75.0
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 5.8e-07 58.9 36 75.0


User provided reference genes

Program Settings