Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 2.4e-90 335.5 172 100.0
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 1.4e-58 229.9 173 68.2
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 5.4e-58 228.0 169 69.8
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.1e-53 213.8 170 66.5
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 6.9e-53 211.1 172 66.3
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.3e-51 206.8 172 65.1
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 1.7e-51 206.5 172 65.1
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.6e-46 189.9 173 61.8
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 4.8e-46 188.3 174 63.8
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 9.9e-44 180.6 189 56.6
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 2.2e-43 179.5 174 59.2
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 3.9e-40 168.7 92 93.5
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 5.1e-40 168.3 189 52.9
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 3.1e-37 159.1 172 56.4
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 9.0e-37 157.5 179 52.5
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.6e-36 156.0 172 54.1
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 3.4e-36 155.6 175 51.4
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 7.6e-36 154.5 179 49.7
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.2e-33 147.1 172 52.9
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 3.0e-32 142.5 178 48.3
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 8.7e-32 141.0 168 53.6
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 1.9e-31 139.8 146 57.5
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 3.3e-31 139.0 182 47.3
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 4.3e-31 138.7 183 47.0
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 7.4e-31 137.9 144 53.5
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.3e-30 137.1 98 72.4
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.6e-30 136.7 138 60.1
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 4.8e-30 135.2 176 50.0
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 4.8e-30 135.2 172 48.8
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 8.2e-30 134.4 137 56.9
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.1e-29 134.0 174 49.4
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.1e-29 134.0 174 49.4
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 3.1e-29 132.5 136 56.6
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 3.1e-29 132.5 97 69.1
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 5.3e-29 131.7 140 56.4
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 5.3e-29 131.7 140 56.4
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 6.9e-29 131.3 98 70.4
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 6.9e-29 131.3 98 70.4
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 6.9e-29 131.3 98 70.4
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 9.0e-29 131.0 98 70.4
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 9.0e-29 131.0 165 49.7
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 9.0e-29 131.0 165 49.7
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 1.2e-28 130.6 175 46.9
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.5e-28 130.2 143 55.9
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.5e-28 130.2 175 48.0
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 2.0e-28 129.8 178 46.6
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 3.4e-28 129.0 98 70.4
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 4.5e-28 128.6 175 44.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 5.9e-28 128.3 98 69.4
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 7.6e-28 127.9 174 48.3
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 7.6e-28 127.9 148 52.0
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 7.6e-28 127.9 116 61.2
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.0e-27 127.5 148 55.4
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 1.0e-27 127.5 176 47.7
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.7e-27 126.7 98 67.3
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 2.2e-27 126.3 95 66.3
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 2.2e-27 126.3 96 64.6
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 2.2e-27 126.3 126 59.5
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.9e-27 125.9 95 67.4
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.9e-27 125.9 95 67.4
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 3.8e-27 125.6 162 51.9
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 5.0e-27 125.2 174 46.0
SGA_v2.0_scaffold111G31380 Striga asiatica HOM05D006875 ORTHO05D008416 1.1e-26 124.0 142 52.1
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.4e-26 123.6 173 46.2
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 1.4e-26 123.6 172 43.6
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 4.2e-26 122.1 108 61.1
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 4.2e-26 122.1 108 61.1
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 5.5e-26 121.7 144 51.4
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 9.3e-26 120.9 172 41.9
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 2.7e-25 119.4 141 50.4
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 6.1e-25 118.2 177 42.9
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 3.9e-24 115.5 133 51.9
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 6.7e-24 114.8 120 57.5
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 8.7e-24 114.4 92 67.4
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 2.5e-23 112.8 177 43.5
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 5.7e-23 111.7 176 40.9
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 5.7e-23 111.7 172 43.6
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 2.2e-22 109.8 251 35.1
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 1.1e-21 107.5 157 43.9
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.4e-21 106.3 179 41.9
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.5e-20 103.6 147 45.6
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 5.9e-20 101.7 149 44.3
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.0e-19 100.9 145 45.5
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 1.0e-19 100.9 65 75.4
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.7e-19 100.1 62 79.0
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 2.2e-19 99.8 186 40.9
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.8e-19 99.0 145 44.8
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 5.0e-19 98.6 167 40.7
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.0e-19 98.6 167 40.7
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.5e-19 98.2 167 40.7
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.5e-19 97.8 168 39.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.1e-18 97.4 172 40.7
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.1e-18 97.4 141 44.7
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 1.1e-18 97.4 95 55.8
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 2.5e-18 96.3 159 39.0
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 2.1e-17 93.2 103 49.5
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 2.1e-17 93.2 138 44.2
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.0e-16 90.9 55 80.0
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 2.3e-16 89.7 69 71.0
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 3.9e-16 89.0 69 65.2
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 3.3e-15 85.9 159 40.3
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 4.4e-15 85.5 66 65.2
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.7e-14 83.6 114 45.6
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 2.2e-14 83.2 128 43.8
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 1.1e-13 80.9 137 40.1
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.4e-13 80.5 144 38.2
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.8e-13 80.1 150 37.3
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 2.6e-12 76.3 100 46.0
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 7.7e-12 74.7 79 49.4
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 7.7e-12 74.7 67 59.7
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.1e-10 70.9 117 43.6
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.4e-10 70.5 76 50.0
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 1.9e-10 70.1 151 35.1
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 2.5e-10 69.7 45 71.1
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.1e-07 60.8 77 45.5
DCAR_004255 Daucus carota HOM05D049898 ORTHO05D008416 4.8e-06 55.5 117 41.0


User provided reference genes

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