Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 1.7e-185 652.5 327 100.0
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 4.7e-26 122.9 215 44.7
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 8.0e-26 122.1 128 55.5
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 1.0e-25 121.7 189 44.4
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 2.3e-25 120.6 210 41.9
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.2e-24 118.2 133 52.6
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 1.5e-24 117.9 186 43.5
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 1.5e-24 117.9 200 42.5
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 3.4e-24 116.7 183 42.6
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 5.7e-24 115.9 179 46.9
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 5.7e-24 115.9 187 42.2
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 9.8e-24 115.2 211 43.6
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 1.7e-23 114.4 133 52.6
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.7e-23 114.4 131 52.7
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 2.2e-23 114.0 131 51.1
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 2.8e-23 113.6 180 44.4
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 2.8e-23 113.6 166 45.8
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 4.8e-23 112.8 127 52.8
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 4.8e-23 112.8 127 52.8
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 4.8e-23 112.8 180 43.9
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 6.3e-23 112.5 144 50.0
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 6.3e-23 112.5 131 51.9
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 6.3e-23 112.5 217 42.4
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 6.3e-23 112.5 131 53.4
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 8.3e-23 112.1 162 45.7
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 8.3e-23 112.1 125 52.8
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 8.3e-23 112.1 131 52.7
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 8.3e-23 112.1 180 43.9
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 1.1e-22 111.7 127 53.5
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.4e-22 111.3 165 45.5
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 1.4e-22 111.3 181 44.8
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 1.4e-22 111.3 126 54.0
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.8e-22 110.9 131 51.1
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 2.4e-22 110.5 157 45.2
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 3.1e-22 110.2 195 43.6
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 4.1e-22 109.8 126 53.2
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 5.4e-22 109.4 133 50.4
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 5.4e-22 109.4 134 52.2
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 5.4e-22 109.4 147 48.3
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 7.0e-22 109.0 157 46.5
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 7.0e-22 109.0 132 51.5
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 9.1e-22 108.6 126 51.6
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 9.1e-22 108.6 133 48.9
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 1.2e-21 108.2 180 43.3
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 1.2e-21 108.2 127 51.2
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 1.2e-21 108.2 159 47.8
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 1.6e-21 107.8 109 56.9
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 1.6e-21 107.8 109 56.9
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 1.6e-21 107.8 109 56.9
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 2.0e-21 107.5 109 56.9
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 2.0e-21 107.5 132 50.0
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 2.7e-21 107.1 133 48.1
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 2.7e-21 107.1 129 52.7
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 3.5e-21 106.7 114 55.3
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 3.5e-21 106.7 133 51.9
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 3.5e-21 106.7 131 52.7
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 4.5e-21 106.3 129 51.2
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 5.9e-21 105.9 133 49.6
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 5.9e-21 105.9 131 49.6
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 7.7e-21 105.5 114 54.4
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 7.7e-21 105.5 133 51.9
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 7.7e-21 105.5 130 50.8
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 1.0e-20 105.1 109 55.0
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 1.0e-20 105.1 139 47.5
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 1.0e-20 105.1 130 51.5
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 1.7e-20 104.4 119 56.3
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 1.7e-20 104.4 131 51.1
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 1.7e-20 104.4 190 40.5
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 2.2e-20 104.0 132 48.5
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 2.2e-20 104.0 157 43.3
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 2.2e-20 104.0 130 50.0
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 2.2e-20 104.0 203 39.9
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 2.9e-20 103.6 126 51.6
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 2.9e-20 103.6 153 44.4
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 3.8e-20 103.2 132 48.5
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 3.8e-20 103.2 132 48.5
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.8e-20 103.2 126 51.6
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 5.0e-20 102.8 126 51.6
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 5.0e-20 102.8 126 51.6
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 5.0e-20 102.8 131 50.4
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 5.0e-20 102.8 173 41.0
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 6.5e-20 102.4 125 51.2
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 6.5e-20 102.4 126 50.8
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 6.5e-20 102.4 129 48.8
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 8.5e-20 102.1 109 54.1
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 1.1e-19 101.7 116 55.2
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.1e-19 101.7 126 50.8
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 1.1e-19 101.7 131 49.6
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 1.5e-19 101.3 111 54.1
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 1.5e-19 101.3 132 47.0
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 1.5e-19 101.3 140 47.9
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 3.2e-19 100.1 106 54.7
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 3.2e-19 100.1 130 49.2
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 9.4e-19 98.6 117 51.3
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 9.4e-19 98.6 117 51.3
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 9.4e-19 98.6 185 41.1
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 1.2e-18 98.2 129 50.4
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 1.6e-18 97.8 130 47.7
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 2.1e-18 97.4 119 52.1
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 2.1e-18 97.4 119 52.1
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 2.7e-18 97.1 132 45.5
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 3.6e-18 96.7 125 48.8
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 4.7e-18 96.3 133 48.1
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 1.0e-17 95.1 135 47.4
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 6.8e-17 92.4 114 50.0
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 3.4e-16 90.1 83 59.0
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 4.4e-16 89.7 81 61.7
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 4.4e-16 89.7 81 61.7
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 9.8e-16 88.6 81 60.5
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 1.3e-15 88.2 59 72.9
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 2.2e-15 87.4 57 75.4
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.8e-15 87.0 107 51.4
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 4.9e-15 86.3 57 73.7
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 1.1e-14 85.1 55 76.4
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 1.4e-14 84.7 59 71.2
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 1.8e-14 84.3 142 45.1
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 9.1e-14 82.0 83 55.4
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 1.2e-13 81.6 57 71.9
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 2.7e-13 80.5 125 41.6
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 8.6e-12 75.5 83 50.6
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 8.0e-10 68.9 129 45.7


User provided reference genes

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