Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35846 Striga asiatica HOM05D035903 ORTHO05D002736 4.4e-273 944.1 512 100.0
SGA_v2.0_scaffold97G29144 Striga asiatica HOM05D035903 ORTHO05D002736 2.1e-65 254.2 164 82.3
MSTRG.1820 Avicennia marina HOM05D002584 ORTHO05D002736 1.5e-50 204.9 689 29.0
SGA_v2.0_scaffold10G05321 Striga asiatica HOM05D035903 ORTHO05D002736 1.9e-50 204.5 114 92.1
Migut.E01233 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.3e-34 150.6 580 28.6
Migut.E01018 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.1e-24 117.5 211 37.0
Migut.O00408 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.0e-23 114.8 202 38.1
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 3.4e-23 114.0 548 25.7
Migut.A00681 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.9e-22 110.9 177 40.1
ATR1093G048 Amborella trichopoda HOM05D002584 ORTHO05D002736 4.9e-22 110.2 137 44.5
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 1.4e-21 108.6 122 49.2
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 1.2e-20 105.5 122 50.0
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 1.2e-20 105.5 158 42.4
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 2.7e-20 104.4 212 33.5
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 3.5e-20 104.0 122 50.0
Migut.J00941 Erythranthe guttata HOM05D002584 ORTHO05D002736 4.6e-20 103.6 135 44.4
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 6.0e-20 103.2 122 48.4
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 6.0e-20 103.2 210 35.2
Migut.A00683 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.3e-19 102.1 135 40.7
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 1.3e-19 102.1 151 43.7
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 1.7e-19 101.7 142 43.0
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 1.7e-19 101.7 139 45.3
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 2.3e-19 101.3 122 50.0
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 2.3e-19 101.3 138 47.1
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 2.3e-19 101.3 177 40.1
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 3.9e-19 100.5 116 50.9
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 3.9e-19 100.5 139 43.2
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 5.1e-19 100.1 116 50.9
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 5.1e-19 100.1 162 39.5
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 6.6e-19 99.8 122 47.5
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 8.7e-19 99.4 114 48.2
Oeu046819.1 Olea europaea HOM05D002584 ORTHO05D002736 1.1e-18 99.0 166 36.1
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 1.5e-18 98.6 539 25.4
Nn3g19082 Nelumbo nucifera HOM05D002584 ORTHO05D002736 1.5e-18 98.6 144 41.7
QL02p031474 Quercus lobata HOM05D002584 ORTHO05D002736 1.5e-18 98.6 128 40.6
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 1.5e-18 98.6 115 49.6
PSO063G1767 Papaver somniferum HOM05D002584 ORTHO05D002736 2.5e-18 97.8 119 43.7
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 4.3e-18 97.1 119 46.2
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 5.6e-18 96.7 586 25.1
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 5.6e-18 96.7 128 43.8
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 7.3e-18 96.3 129 45.0
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 7.3e-18 96.3 120 45.8
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 7.3e-18 96.3 127 45.7
PSO063G5339 Papaver somniferum HOM05D002584 ORTHO05D002736 9.6e-18 95.9 126 41.3
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 9.6e-18 95.9 138 43.5
Cc08_g15750 Coffea canephora HOM05D002584 ORTHO05D002736 1.3e-17 95.5 114 43.0
Actinidia22714 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.6e-17 95.1 128 44.5
Oeu017335.1 Olea europaea HOM05D002584 ORTHO05D002736 1.6e-17 95.1 294 28.9
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 1.6e-17 95.1 126 43.7
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 2.1e-17 94.7 129 44.2
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 2.8e-17 94.4 114 47.4
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 3.6e-17 94.0 116 45.7
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 3.6e-17 94.0 155 40.6
PSO764G0213 Papaver somniferum HOM05D002584 ORTHO05D002736 3.6e-17 94.0 117 43.6
PSO832G4482 Papaver somniferum HOM05D002584 ORTHO05D002736 3.6e-17 94.0 117 43.6
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 4.8e-17 93.6 114 47.4
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 6.2e-17 93.2 126 43.7
AUR62019335 Chenopodium quinoa HOM05D002584 ORTHO05D002736 8.1e-17 92.8 167 37.1
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 8.1e-17 92.8 205 33.7
PSO675G0694 Papaver somniferum HOM05D002584 ORTHO05D002736 8.1e-17 92.8 117 42.7
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 1.1e-16 92.4 125 42.4
PSO591G0115 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-16 92.4 110 44.5
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 1.1e-16 92.4 200 35.5
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.8e-16 91.7 125 42.4
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.8e-16 91.7 125 42.4
PSO017G4509 Papaver somniferum HOM05D002584 ORTHO05D002736 1.8e-16 91.7 217 34.1
PSO675G1901 Papaver somniferum HOM05D002584 ORTHO05D002736 1.8e-16 91.7 116 43.1
SGA_v2.0_scaffold144G35843 Striga asiatica HOM05D034841 ORTHO05D002736 2.4e-16 91.3 534 25.5
Lalb_Chr08g0240601 Lupinus albus HOM05D002584 ORTHO05D002736 4.0e-16 90.5 114 45.6
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 4.0e-16 90.5 129 42.6
Zm00001eb119710 Zea mays HOM05D002584 ORTHO05D002736 4.0e-16 90.5 117 43.6
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 5.3e-16 90.1 112 49.1
PSO017G5210 Papaver somniferum HOM05D002584 ORTHO05D002736 5.3e-16 90.1 117 41.9
PSO210G0413 Papaver somniferum HOM05D002584 ORTHO05D002736 5.3e-16 90.1 118 39.0
AT5G53220 Arabidopsis thaliana HOM05D002584 ORTHO05D002736 6.9e-16 89.7 144 40.3
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 6.9e-16 89.7 127 44.1
PSO170G2676 Papaver somniferum HOM05D002584 ORTHO05D002736 6.9e-16 89.7 217 32.3
PSO675G1890 Papaver somniferum HOM05D002584 ORTHO05D002736 6.9e-16 89.7 110 43.6
PSO675G6647 Papaver somniferum HOM05D002584 ORTHO05D002736 6.9e-16 89.7 116 43.1
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 9.0e-16 89.4 436 25.5
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 9.0e-16 89.4 127 44.1
HanXRQChr09g0253091 Helianthus annuus HOM05D002584 ORTHO05D002736 1.2e-15 89.0 146 38.4
Actinidia08626 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.5e-15 88.6 107 49.5
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 1.5e-15 88.6 203 36.0
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.5e-15 88.6 203 36.0
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.5e-15 88.6 203 36.0
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 1.5e-15 88.6 286 31.1
PSO017G1735 Papaver somniferum HOM05D002584 ORTHO05D002736 2.0e-15 88.2 117 41.0
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 2.0e-15 88.2 122 44.3
Aqoxy7G01617 Aquilegia oxysepala HOM05D002584 ORTHO05D002736 2.6e-15 87.8 156 37.2
PSO732G0573 Papaver somniferum HOM05D002584 ORTHO05D002736 2.6e-15 87.8 118 41.5
A03p15280 Brassica napus HOM05D002584 ORTHO05D002736 3.4e-15 87.4 124 42.7
BraA03t10821Z Brassica rapa HOM05D002584 ORTHO05D002736 3.4e-15 87.4 124 42.7
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 3.4e-15 87.4 142 40.8
PSO339G0177 Papaver somniferum HOM05D002584 ORTHO05D002736 4.5e-15 87.0 189 31.7
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 4.5e-15 87.0 128 40.6
HanXRQChr09g0253061 Helianthus annuus HOM05D002584 ORTHO05D002736 5.8e-15 86.7 119 41.2
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 5.8e-15 86.7 339 27.4
PSO832G1019 Papaver somniferum HOM05D002584 ORTHO05D002736 5.8e-15 86.7 213 32.9
Atru.chr9.2048 Acer truncatum HOM05D002584 ORTHO05D002736 7.6e-15 86.3 116 38.8
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 9.9e-15 85.9 210 32.4
HanXRQChr09g0253081 Helianthus annuus HOM05D002584 ORTHO05D002736 9.9e-15 85.9 118 44.1
Rhsim07G0084300 Rhododendron simsii HOM05D002584 ORTHO05D002736 9.9e-15 85.9 141 39.0
PSO675G6667 Papaver somniferum HOM05D002584 ORTHO05D002736 1.3e-14 85.5 111 41.4
PSO832G3317 Papaver somniferum HOM05D002584 ORTHO05D002736 1.7e-14 85.1 116 42.2
Ciclev10019635m.g Citrus clementina HOM05D002584 ORTHO05D002736 2.2e-14 84.7 136 39.0
PSO421G0489 Papaver somniferum HOM05D002584 ORTHO05D002736 2.2e-14 84.7 123 38.2
Migut.F00244 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.9e-14 84.3 118 41.5
PSO063G5830 Papaver somniferum HOM05D002584 ORTHO05D002736 2.9e-14 84.3 135 39.3
PSO732G0710 Papaver somniferum HOM05D002584 ORTHO05D002736 2.9e-14 84.3 451 26.6
Solyc08g082000.4 Solanum lycopersicum HOM05D002584 ORTHO05D002736 2.9e-14 84.3 148 39.2
SGA_v2.0_scaffold192G40581 Striga asiatica HOM05D002584 ORTHO05D002736 2.9e-14 84.3 147 38.1
BcaC01g06231 Brassica carinata HOM05D002584 ORTHO05D002736 3.8e-14 84.0 127 40.9
C03p17860 Brassica napus HOM05D002584 ORTHO05D002736 3.8e-14 84.0 127 40.9
BolC3t14193H Brassica oleracea HOM05D002584 ORTHO05D002736 3.8e-14 84.0 127 40.9
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 3.8e-14 84.0 241 27.4
Hund11407 Selenicereus undatus HOM05D002584 ORTHO05D002736 3.8e-14 84.0 112 39.3
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 4.9e-14 83.6 244 29.9
Os01g0221300 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 4.9e-14 83.6 144 33.3
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 6.4e-14 83.2 219 32.9
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 6.4e-14 83.2 219 32.9
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 8.4e-14 82.8 202 35.1
Sopen08g030300 Solanum pennellii HOM05D002584 ORTHO05D002736 8.4e-14 82.8 151 38.4
AL8G27880 Arabidopsis lyrata HOM05D002584 ORTHO05D002736 1.4e-13 82.0 242 31.0
Eucgr.E00841 Eucalyptus grandis HOM05D002584 ORTHO05D002736 1.4e-13 82.0 110 43.6
PSO591G0137 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-13 82.0 258 31.8
PSO764G0332 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-13 82.0 116 43.1
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 1.4e-13 82.0 279 31.2
SGA_v2.0_scaffold111G31456 Striga asiatica HOM05D034841 ORTHO05D002736 1.4e-13 82.0 406 26.6
AUR62006155 Chenopodium quinoa HOM05D002584 ORTHO05D002736 1.9e-13 81.6 195 32.8
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.9e-13 81.6 253 30.4
arahy.Tifrunner.gnm1.ann1.84BZB4 Arachis hypogaea HOM05D002584 ORTHO05D002736 2.4e-13 81.3 97 51.5
Peaxi162Scf00074g01214 Petunia axillaris HOM05D002584 ORTHO05D002736 2.4e-13 81.3 155 37.4
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 3.2e-13 80.9 235 30.6
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 3.2e-13 80.9 245 31.4
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 4.2e-13 80.5 438 26.0
PSO017G6345 Papaver somniferum HOM05D002584 ORTHO05D002736 5.4e-13 80.1 171 34.5
PSO675G5115 Papaver somniferum HOM05D002584 ORTHO05D002736 5.4e-13 80.1 439 24.8
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 7.1e-13 79.7 472 25.4
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 7.1e-13 79.7 130 37.7
Lsat_1_v5_gn_9_57421 Lactuca sativa HOM05D002584 ORTHO05D002736 7.1e-13 79.7 140 38.6
AUR62041778 Chenopodium quinoa HOM05D002584 ORTHO05D002736 9.3e-13 79.3 147 34.7
Thhalv10013960m.g Eutrema salsugineum HOM05D002584 ORTHO05D002736 2.1e-12 78.2 250 31.6
PSO782G5749 Papaver somniferum HOM05D002584 ORTHO05D002736 2.7e-12 77.8 135 37.8
Ah.07g206030 Amaranthus hybridus HOM05D002584 ORTHO05D002736 3.5e-12 77.4 110 40.0
ECA232G0187 Erigeron canadensis HOM05D002584 ORTHO05D002736 1.0e-11 75.9 122 39.3
PSO170G4022 Papaver somniferum HOM05D002584 ORTHO05D002736 1.0e-11 75.9 122 35.2
PSO210G0379 Papaver somniferum HOM05D002584 ORTHO05D002736 1.0e-11 75.9 122 35.2
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 3.0e-11 74.3 288 28.1
CAN.G532.93 Capsicum annuum HOM05D002584 ORTHO05D002736 3.0e-11 74.3 115 39.1
CAN.G792.48 Capsicum annuum HOM05D002584 ORTHO05D002736 5.1e-11 73.6 115 38.3
CAN.G1505.1 Capsicum annuum HOM05D002584 ORTHO05D002736 6.7e-11 73.2 115 37.4
PSO478G0802 Papaver somniferum HOM05D002584 ORTHO05D002736 6.7e-11 73.2 331 26.6
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 1.5e-10 72.0 548 26.6
PSO732G0732 Papaver somniferum HOM05D002584 ORTHO05D002736 1.5e-10 72.0 189 29.6
Sed0013734 Sechium edule HOM05D002584 ORTHO05D002736 1.9e-10 71.6 147 32.0
CAN.G792.63 Capsicum annuum HOM05D002584 ORTHO05D002736 3.3e-10 70.9 253 30.4
DCAR_005024 Daucus carota HOM05D002584 ORTHO05D002736 7.4e-10 69.7 403 25.3
TPR.G33314 Trifolium pratense HOM05D002584 ORTHO05D002736 9.6e-10 69.3 190 30.0
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 1.3e-09 68.9 566 26.3
Peaxi162Scf00102g01740 Petunia axillaris HOM05D002584 ORTHO05D002736 2.1e-09 68.2 134 38.1
FAN03G2222 Fragaria x ananassa HOM05D002584 ORTHO05D002736 4.8e-09 67.0 116 41.4
PSO732G0349 Papaver somniferum HOM05D002584 ORTHO05D002736 6.2e-09 66.6 134 37.3
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 6.2e-09 66.6 548 22.8
Sed0024155 Sechium edule HOM05D002584 ORTHO05D002736 6.2e-09 66.6 185 29.2
PGSC0003DMG400012162 Solanum tuberosum HOM05D002584 ORTHO05D002736 6.2e-09 66.6 577 24.8
EL10Ac4g09958 Beta vulgaris HOM05D002584 ORTHO05D002736 1.4e-08 65.5 559 24.5
Aa31LG3G2620 Aethionema arabicum HOM05D002584 ORTHO05D002736 2.4e-08 64.7 528 25.4
Nitab4.5_0000223g0150 Nicotiana tabacum HOM05D002584 ORTHO05D002736 4.0e-08 63.9 522 25.1
PSO675G5053 Papaver somniferum HOM05D002584 ORTHO05D002736 4.0e-08 63.9 173 31.8
MELO3C016311.2 Cucumis melo HOM05D002584 ORTHO05D002736 6.9e-08 63.2 257 28.4
CsaV3_4G006400 Cucumis sativus L. HOM05D002584 ORTHO05D002736 6.9e-08 63.2 254 28.7
Medtr1g028620 Medicago truncatula HOM05D002584 ORTHO05D002736 9.0e-08 62.8 194 26.8
CAN.G792.51 Capsicum annuum HOM05D002584 ORTHO05D002736 1.2e-07 62.4 148 33.8
Potri.014G039200 Populus trichocarpa HOM05D002584 ORTHO05D002736 1.2e-07 62.4 329 23.7
Medtr1g028880 Medicago truncatula HOM05D002584 ORTHO05D002736 1.5e-07 62.0 223 27.4
EL10Ac5g12881 Beta vulgaris HOM05D002584 ORTHO05D002736 2.6e-07 61.2 232 25.0
CAN.G792.56 Capsicum annuum HOM05D002584 ORTHO05D002736 3.4e-07 60.8 148 31.8
vmacro13916 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 5.8e-07 60.1 101 37.6
SGA_v2.0_scaffold111G31432 Striga asiatica HOM05D034841 ORTHO05D402437 7.6e-07 59.7 275 28.7
HanXRQChr17g0535091 Helianthus annuus HOM05D002584 ORTHO05D002736 1.7e-06 58.5 213 27.7
Sabra01G0070500 Salix brachista HOM05D002584 ORTHO05D002736 2.9e-06 57.8 151 29.1
ECA246G0735 Erigeron canadensis HOM05D002584 ORTHO05D002736 3.8e-06 57.4 137 30.7
CAN.G792.54 Capsicum annuum HOM05D002584 ORTHO05D002736 4.9e-06 57.0 398 26.4
GSVIVG01019494001 Vitis vinifera HOM05D011767 ORTHO05D013559 8.4e-06 56.2 196 31.6


User provided reference genes

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