Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 0.0e+00 1080.5 537 100.0
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 4.3e-210 734.9 535 68.6
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.0e-207 726.1 510 70.4
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.6e-207 725.7 510 70.6
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.2e-175 620.5 490 62.0
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 3.8e-174 615.5 488 60.5
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 6.7e-171 604.7 496 60.1
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 8.1e-169 597.8 481 60.1
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 2.4e-168 596.3 489 62.2
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 4.0e-168 595.5 497 59.2
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 9.0e-168 594.3 497 58.4
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 2.2e-166 589.7 496 58.1
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 6.5e-166 588.2 486 58.2
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.4e-165 587.0 486 58.2
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 3.0e-163 579.3 488 58.0
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 4.2e-157 558.9 530 52.5
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 7.2e-157 558.1 429 61.1
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 9.3e-157 557.8 490 56.1
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 1.6e-156 557.0 519 52.4
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 2.1e-156 556.6 462 56.9
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 3.0e-155 552.7 511 54.6
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 3.9e-155 552.4 478 55.0
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 3.9e-155 552.4 457 59.1
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 1.1e-154 550.8 514 54.3
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 2.5e-154 549.7 552 51.8
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 2.5e-154 549.7 496 53.8
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 3.3e-154 549.3 451 58.3
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 2.2e-153 546.6 463 56.6
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 4.8e-153 545.4 461 57.0
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 1.2e-151 540.8 537 51.0
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 2.0e-151 540.0 477 56.2
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 1.3e-150 537.3 533 51.6
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 2.2e-150 536.6 431 58.9
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 2.9e-150 536.2 526 52.3
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 3.8e-150 535.8 491 53.4
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 6.5e-150 535.0 536 49.3
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 2.5e-149 533.1 474 55.5
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 5.5e-149 531.9 412 60.9
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 5.5e-149 531.9 494 53.4
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 9.4e-149 531.2 458 55.5
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 6.1e-148 528.5 405 59.8
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 6.1e-148 528.5 428 58.4
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 1.8e-147 526.9 437 57.0
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 3.0e-147 526.2 437 57.0
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 3.0e-147 526.2 463 53.6
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 6.7e-147 525.0 491 52.3
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 6.7e-147 525.0 479 54.1
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.5e-146 523.1 489 54.0
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.5e-146 523.1 471 54.4
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 7.4e-146 521.5 488 53.9
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 7.4e-146 521.5 514 50.6
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 2.2e-145 520.0 461 55.1
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 8.2e-145 518.1 435 56.3
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 1.1e-144 517.7 492 53.3
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.4e-144 517.3 514 50.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.4e-144 517.3 405 59.5
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 3.1e-144 516.2 535 49.5
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 4.1e-144 515.8 477 53.7
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.1e-144 515.8 405 59.3
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 1.2e-143 514.2 482 54.1
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 2.0e-143 513.5 461 54.2
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 2.6e-143 513.1 440 57.3
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 3.4e-143 512.7 466 54.3
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 1.3e-142 510.8 460 55.7
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 1.7e-142 510.4 475 53.9
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.7e-142 510.4 471 54.1
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.7e-142 510.4 395 57.7
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 2.9e-142 509.6 419 58.0
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 1.1e-141 507.7 413 57.9
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 2.5e-141 506.5 460 54.6
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 4.2e-141 505.8 483 53.8
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 2.1e-140 503.4 483 53.8
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 6.1e-140 501.9 458 54.6
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 7.9e-140 501.5 482 53.9
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 2.3e-139 500.0 483 53.8
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 3.9e-139 499.2 484 52.5
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 1.4e-136 490.7 503 50.5
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.6e-135 487.3 456 53.7
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 8.0e-132 474.9 525 48.4
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 1.3e-129 467.6 370 58.4
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 1.0e-123 448.0 479 49.7
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 7.5e-122 441.8 359 53.2
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.4e-112 411.0 384 49.7
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.0e-110 404.8 293 64.2
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 1.0e-110 404.8 390 49.2
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 1.5e-109 401.0 438 46.6
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.5e-109 400.2 412 47.1
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 2.3e-102 377.1 285 61.8
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 1.5e-101 374.4 284 60.6
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 3.3e-101 373.2 289 58.8
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 1.9e-93 347.4 273 60.4
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 3.1e-91 340.1 271 59.4
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 8.9e-91 338.6 363 47.9
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 4.4e-90 336.3 368 47.6
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.2e-89 334.0 500 38.4
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 3.3e-85 320.1 480 38.5
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 1.6e-84 317.8 472 39.4
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.7e-81 307.8 257 59.1
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 4.1e-80 303.1 225 60.4
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 1.6e-76 291.2 221 63.3
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 1.1e-72 278.5 221 58.8
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.2e-72 276.9 242 57.0
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 3.5e-63 246.9 521 31.1
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.8e-59 234.6 168 64.3
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 6.4e-57 226.1 248 44.4
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 4.6e-55 219.9 302 38.7
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 5.3e-43 179.9 283 33.2
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 8.5e-41 172.6 188 47.3
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 2.1e-39 167.9 200 43.0
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 6.1e-39 166.4 261 37.5
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 3.9e-38 163.7 177 49.7
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 6.3e-36 156.4 482 26.3
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 2.4e-35 154.5 390 31.3
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 1.1e-32 145.6 251 37.1
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 1.4e-32 145.2 103 67.0
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.8e-28 131.0 104 62.5
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 2.0e-26 124.8 129 46.5
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.3e-22 111.3 91 60.4
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 1.5e-21 108.6 209 34.4
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 5.9e-18 96.7 98 50.0
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 2.8e-12 77.8 66 60.6
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 2.0e-10 71.6 65 50.8
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 1.1e-08 65.9 35 68.6
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-07 60.8 44 56.8
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 2.3e-06 58.2 38 60.5


User provided reference genes

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