Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 8.1e-160 567.0 281 100.0
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 4.0e-151 538.1 281 96.4
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 3.9e-138 495.0 279 85.3
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 4.3e-137 491.5 277 84.1
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 1.4e-132 476.5 279 81.7
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 1.1e-129 466.8 279 78.1
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 1.5e-129 466.5 279 79.6
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.9e-129 466.1 279 79.2
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 5.6e-129 464.5 279 76.0
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 1.6e-128 463.0 279 76.3
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 1.4e-127 459.9 278 75.2
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 2.4e-127 459.1 279 74.9
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 3.1e-127 458.8 279 77.8
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 2.6e-126 455.7 279 74.9
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 5.8e-126 454.5 281 75.1
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 2.2e-125 452.6 279 75.6
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 3.8e-125 451.8 279 75.6
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 4.9e-125 451.4 277 75.8
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 6.4e-125 451.1 279 75.3
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 6.4e-125 451.1 279 75.6
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 7.1e-124 447.6 279 74.6
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 9.3e-124 447.2 279 74.2
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 9.3e-124 447.2 280 75.4
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 1.6e-123 446.4 278 74.8
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 1.6e-123 446.4 279 76.3
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 2.1e-123 446.0 279 74.2
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 2.7e-123 445.7 279 73.5
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 3.5e-123 445.3 279 74.2
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 4.6e-123 444.9 279 73.8
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 4.6e-123 444.9 279 75.6
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.3e-122 443.4 279 74.9
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 1.8e-122 443.0 281 74.4
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 6.7e-122 441.0 279 74.9
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 6.7e-122 441.0 279 73.8
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 8.7e-122 440.7 279 74.2
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 4.3e-121 438.3 279 74.2
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 4.3e-121 438.3 279 74.2
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 4.3e-121 438.3 264 78.8
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 5.6e-121 438.0 279 73.5
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 5.6e-121 438.0 277 73.3
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 7.4e-121 437.6 308 69.5
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 7.4e-121 437.6 279 74.9
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 9.6e-121 437.2 279 74.9
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 9.6e-121 437.2 279 74.6
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 1.6e-120 436.4 279 72.8
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 1.6e-120 436.4 279 73.8
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 2.1e-120 436.0 279 73.5
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 3.7e-120 435.3 279 76.0
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 8.2e-120 434.1 280 72.9
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 8.2e-120 434.1 279 72.4
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 1.4e-119 433.3 279 74.2
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 2.4e-119 432.6 279 72.0
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 3.1e-119 432.2 279 71.7
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 4.0e-119 431.8 279 71.3
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 5.3e-119 431.4 279 72.0
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 6.9e-119 431.0 279 72.8
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 6.9e-119 431.0 279 72.8
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 9.0e-119 430.6 279 71.3
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.5e-118 429.9 279 73.1
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.6e-118 429.1 279 72.8
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 2.6e-118 429.1 280 74.6
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 3.4e-118 428.7 279 72.4
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 4.5e-118 428.3 278 73.4
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 4.5e-118 428.3 278 73.0
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.0e-117 427.2 279 73.1
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 1.0e-117 427.2 279 70.6
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.7e-117 426.4 279 70.3
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 1.7e-117 426.4 279 73.8
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 2.2e-117 426.0 279 72.4
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.8e-117 425.2 279 72.4
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 3.8e-117 425.2 279 70.3
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 6.5e-117 424.5 280 71.8
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.4e-116 423.3 283 72.1
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.5e-116 422.5 279 70.3
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 5.5e-116 421.4 279 73.1
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.2e-115 420.2 282 71.6
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 1.8e-114 416.4 279 71.0
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.8e-114 416.4 279 71.0
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 1.1e-113 413.7 279 69.9
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.8e-112 409.1 279 68.8
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 3.7e-112 408.7 254 76.0
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 4.1e-111 405.2 280 68.9
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 1.2e-110 403.7 233 82.4
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 3.4e-110 402.1 278 69.4
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 5.9e-110 401.4 279 70.3
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.0e-109 400.6 279 69.9
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 2.2e-109 399.4 277 66.8
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.4e-108 396.7 278 69.1
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 2.5e-108 396.0 276 65.2
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 3.2e-108 395.6 279 65.9
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 9.3e-108 394.0 279 69.2
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 1.2e-107 393.7 279 67.7
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 1.2e-107 393.7 279 67.7
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 1.6e-107 393.3 277 65.7
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 1.6e-107 393.3 278 68.0
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 2.7e-107 392.5 256 71.9
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 4.6e-107 391.7 313 60.7
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.9e-105 386.3 279 64.9
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 5.7e-105 384.8 278 65.8
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 2.8e-104 382.5 279 65.2
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 4.8e-104 381.7 274 66.1
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 1.4e-100 370.2 233 74.7
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 4.2e-100 368.6 279 63.4
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 1.2e-99 367.1 279 62.4
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 1.6e-99 366.7 279 62.7
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 2.7e-99 365.9 279 62.7
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 3.6e-99 365.5 279 63.1
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 7.9e-99 364.4 277 59.9
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 1.8e-98 363.2 262 65.3
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 2.3e-98 362.8 279 62.4
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 3.9e-98 362.1 279 62.4
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 3.9e-98 362.1 279 62.4
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 1.1e-97 360.5 226 75.2
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.5e-97 360.1 279 62.4
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.6e-97 359.4 277 58.8
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 5.7e-97 358.2 279 61.6
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 5.3e-95 351.7 251 67.7
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 1.5e-94 350.1 273 63.7
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 4.2e-92 342.0 279 57.3
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 1.2e-91 340.5 281 62.3
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 6.1e-91 338.2 281 61.6
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 2.0e-89 333.2 321 54.5
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.4e-87 327.0 274 55.5
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 1.8e-87 326.6 276 56.5
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 3.1e-87 325.9 308 56.8
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 1.2e-86 323.9 308 56.2
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 1.0e-85 320.9 318 57.9
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 1.7e-85 320.1 295 55.6
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 4.0e-82 308.9 235 59.6
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 8.2e-80 301.2 284 52.8
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 1.1e-79 300.8 290 53.4
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 5.3e-79 298.5 195 69.7
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 9.1e-79 297.7 276 53.6
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.2e-78 297.4 274 52.2
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 3.5e-78 295.8 277 54.9
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 2.5e-76 289.7 279 54.1
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 1.2e-73 280.8 307 46.9
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.4e-73 279.3 164 80.5
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 6.3e-64 248.4 168 69.0
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 8.3e-64 248.1 167 70.1
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.8e-59 233.0 140 78.6
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 2.6e-57 226.5 205 54.6
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 2.6e-57 226.5 205 54.6
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.7e-48 196.1 146 63.0
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.6e-46 190.7 112 78.6
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.0e-41 173.7 112 75.0
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 2.6e-41 173.3 118 68.6
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 4.7e-35 152.5 287 35.5
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 2.4e-34 150.2 300 31.3
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.2e-30 137.9 164 46.3
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.3e-29 134.4 126 52.4
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 1.3e-24 117.9 281 29.5
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 3.8e-24 116.3 85 67.1
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 6.0e-22 109.0 176 38.1
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 2.5e-20 103.6 280 29.3
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 5.6e-20 102.4 342 30.4
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 9.3e-15 85.1 105 41.9


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