Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold143G35804 Striga asiatica HOM05D000138 ORTHO05D000078 1.2e-118 429.9 220 100.0
SGA_v2.0_scaffold15G07336 Striga asiatica HOM05D000138 ORTHO05D000078 2.3e-24 116.7 120 63.3
MSTRG.15380 Avicennia marina HOM05D000138 ORTHO05D000078 5.7e-20 102.1 111 58.6
Manes.12G106400 Manihot esculenta HOM05D000138 ORTHO05D000078 3.5e-17 92.8 124 50.8
MSTRG.3435 Avicennia marina HOM05D000138 ORTHO05D000078 3.0e-16 89.7 109 55.0
unitig_748.g8399 Utricularia gibba HOM05D000138 ORTHO05D000078 8.6e-16 88.2 110 55.5
MSTRG.2869 Avicennia marina HOM05D000138 ORTHO05D000078 5.6e-15 85.5 113 52.2
Duzib264G0574 Durio zibethinus HOM05D000138 ORTHO05D000078 7.3e-15 85.1 123 48.0
Duzib147G0747 Durio zibethinus HOM05D000138 ORTHO05D000078 3.6e-14 82.8 123 45.5
Actinidia12034 Actinidia chinensis HOM05D000138 ORTHO05D000078 8.0e-14 81.6 107 54.2
Dinv26845 Davidia involucrata HOM05D000138 ORTHO05D000078 8.0e-14 81.6 121 50.4
Potri.007G046200 Populus trichocarpa HOM05D000138 ORTHO05D000078 2.3e-13 80.1 141 42.6
Sabra05G0110600 Salix brachista HOM05D000138 ORTHO05D000078 2.3e-13 80.1 127 47.2
Sabra07G0041300 Salix brachista HOM05D000138 ORTHO05D000078 2.3e-13 80.1 138 42.8
Nitab4.5_0001603g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 3.1e-13 79.7 118 48.3
unitig_32.g10767 Utricularia gibba HOM05D000138 ORTHO05D000078 4.0e-13 79.3 110 52.7
QL06p040660 Quercus lobata HOM05D000138 ORTHO05D000078 5.2e-13 79.0 130 43.8
THA.LOC104819850 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 5.2e-13 79.0 101 52.5
Solyc02g093150.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 6.8e-13 78.6 109 52.3
Sopen02g037720 Solanum pennellii HOM05D000138 ORTHO05D000078 6.8e-13 78.6 109 52.3
FAN28G1244 Fragaria x ananassa HOM05D000138 ORTHO05D000078 8.9e-13 78.2 121 47.9
Haze_15371 Corylus avellana HOM05D000138 ORTHO05D000078 1.5e-12 77.4 124 46.8
Potri.005G140700 Populus trichocarpa HOM05D000138 ORTHO05D000078 1.5e-12 77.4 137 43.8
Lalb_Chr09g0323291 Lupinus albus HOM05D000138 ORTHO05D000078 2.0e-12 77.0 116 49.1
RcHm_v2.0_Chr2g0106221 Rosa chinensis HOM05D000138 ORTHO05D000078 2.0e-12 77.0 132 47.0
Thecc.01G060400 Theobroma cacao HOM05D000138 ORTHO05D000078 2.0e-12 77.0 123 44.7
FAN23G1671 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.6e-12 76.6 122 45.1
FAN26G2578 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.6e-12 76.6 122 47.5
THA.LOC104807594 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 3.4e-12 76.3 103 49.5
Cfa004042 Carpinus fangiana HOM05D000138 ORTHO05D000078 5.8e-12 75.5 126 44.4
Manes.13G120700 Manihot esculenta HOM05D000138 ORTHO05D000078 5.8e-12 75.5 129 42.6
Hma1.2p1_0670F.1_g200420 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 7.5e-12 75.1 119 47.9
FvH4_1g16350 Fragaria vesca HOM05D000138 ORTHO05D000078 2.2e-11 73.6 123 47.2
FAN19G1915 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.2e-11 73.6 123 47.2
Gohir.A12G072900 Gossypium hirsutum HOM05D000138 ORTHO05D000078 2.9e-11 73.2 124 45.2
Gorai.008G077800 Gossypium raimondii HOM05D000138 ORTHO05D000078 4.9e-11 72.4 127 44.1
Cc07_g06200 Coffea canephora HOM05D000138 ORTHO05D000078 6.4e-11 72.0 103 46.6
Migut.L00171 Erythranthe guttata HOM05D000138 ORTHO05D000078 6.4e-11 72.0 114 48.2
Gohir.D12G070800 Gossypium hirsutum HOM05D000138 ORTHO05D000078 8.3e-11 71.6 125 44.0
Nitab4.5_0001221g0060 Nicotiana tabacum HOM05D000138 ORTHO05D000078 8.3e-11 71.6 118 46.6
CAN.G370.36 Capsicum annuum HOM05D000138 ORTHO05D000078 1.1e-10 71.2 113 46.9
Peaxi162Scf00549g00114 Petunia axillaris HOM05D000138 ORTHO05D000078 1.1e-10 71.2 121 45.5
VMungo1215G1443 Vigna mungo HOM05D000138 ORTHO05D000078 4.1e-10 69.3 116 44.8
Actinidia36473 Actinidia chinensis HOM05D000138 ORTHO05D000078 5.4e-10 68.9 106 47.2
CANSAT01G1991 Cannabis sativa HOM05D000138 ORTHO05D000078 5.4e-10 68.9 130 43.1
TWI09G1505 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 5.4e-10 68.9 135 43.0
Lj2g0023594 Lotus japonicus HOM05D000138 ORTHO05D000078 7.0e-10 68.6 120 44.2
Phvul.002G016900 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 7.0e-10 68.6 120 44.2
PGSC0003DMG400004006 Solanum tuberosum HOM05D000138 ORTHO05D000078 7.0e-10 68.6 114 47.4
ECA232G3195 Erigeron canadensis HOM05D000138 ORTHO05D000078 2.0e-09 67.0 113 47.8
CiPaw.01G015100 Carya illinoinensis HOM05D000138 ORTHO05D000078 2.7e-09 66.6 125 44.0
unitig_748.g8602 Utricularia gibba HOM05D000138 ORTHO05D000078 2.7e-09 66.6 103 48.5
CSS0018330 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 3.5e-09 66.2 114 49.1
Oeu014819.1 Olea europaea HOM05D000138 ORTHO05D000078 3.5e-09 66.2 109 43.1
SalBow5G1433 Salvia bowleyana HOM05D000138 ORTHO05D000078 4.6e-09 65.9 114 43.9
Duzib187G0622 Durio zibethinus HOM05D000138 ORTHO05D000078 6.0e-09 65.5 124 40.3
TAR376G0226 Trochodendron aralioides HOM05D000138 ORTHO05D000078 6.0e-09 65.5 115 48.7
Nitab4.5_0000604g0120 Nicotiana tabacum HOM05D000138 ORTHO05D000078 7.8e-09 65.1 109 47.7
Gorai.011G106200 Gossypium raimondii HOM05D000138 ORTHO05D000078 1.3e-08 64.3 123 41.5
Gohir.A10G091300 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.7e-08 63.9 124 41.9
PGSC0003DMG400025479 Solanum tuberosum HOM05D000138 ORTHO05D000078 3.9e-08 62.8 120 39.2
Gohir.D03G024400 Gossypium hirsutum HOM05D000138 ORTHO05D000078 8.6e-08 61.6 115 43.5
Gorai.003G025900 Gossypium raimondii HOM05D000138 ORTHO05D000078 8.6e-08 61.6 115 43.5
COL.COLO4_11450 Corchorus olitorius HOM05D000138 ORTHO05D000078 1.1e-07 61.2 126 41.3
Migut.H00413 Erythranthe guttata HOM05D000138 ORTHO05D000078 1.1e-07 61.2 123 39.8
Hma1.2p1_0017F.1_g011565 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 1.1e-07 61.2 123 43.9
Lsat_1_v5_gn_2_85920 Lactuca sativa HOM05D000138 ORTHO05D000078 1.1e-07 61.2 108 46.3
CiPaw.02G007200 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.5e-07 60.8 125 44.0
Gohir.A02G156300 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.5e-07 60.8 115 43.5
Gohir.D10G096900 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.5e-07 60.8 123 39.8
MSTRG.23731 Avicennia marina HOM05D000138 ORTHO05D000078 3.3e-07 59.7 110 41.8
HPP92_017046 Vanilla planifolia HOM05D000138 ORTHO05D000078 5.6e-07 58.9 104 41.3
Sed0014642 Sechium edule HOM05D000138 ORTHO05D000078 7.3e-07 58.5 105 42.9
Aa31LG6G14060 Aethionema arabicum HOM05D000138 ORTHO05D000078 9.5e-07 58.2 112 38.4
Ciclev10025364m.g Citrus clementina HOM05D000138 ORTHO05D000078 9.5e-07 58.2 124 41.9
Cfa004563 Carpinus fangiana HOM05D000138 ORTHO05D000078 1.2e-06 57.8 99 42.4
Nn5g30360 Nelumbo nucifera HOM05D000138 ORTHO05D000078 1.2e-06 57.8 120 41.7
BcaNung02963 Brassica carinata HOM05D000138 ORTHO05D000078 2.1e-06 57.0 105 42.9
TPR.G26889 Trifolium pratense HOM05D000138 ORTHO05D000078 2.1e-06 57.0 136 39.0
Sopen02g015090 Solanum pennellii HOM05D000138 ORTHO05D000078 2.8e-06 56.6 127 40.2
TWI73G0321 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 2.8e-06 56.6 134 38.8
CsaV3_2G016390 Cucumis sativus L. HOM05D000138 ORTHO05D000078 3.6e-06 56.2 113 39.8
GSVIVG01022081001 Vitis vinifera HOM05D000138 ORTHO05D000078 3.6e-06 56.2 102 42.2
MELO3C020848.2 Cucumis melo HOM05D000138 ORTHO05D000078 4.7e-06 55.8 113 39.8
Glyma.01G188400 Glycine max HOM05D000138 ORTHO05D000078 4.7e-06 55.8 117 40.2
Rhsim08G0099000 Rhododendron simsii HOM05D000138 ORTHO05D000078 4.7e-06 55.8 112 42.0
unitig_699.g19568 Utricularia gibba HOM05D000138 ORTHO05D000078 8.1e-06 55.1 121 38.0


User provided reference genes

Program Settings