Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 1.2e-219 766.1 384 100.0
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 9.0e-178 627.1 379 83.1
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 2.1e-174 615.9 378 81.5
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 1.7e-173 612.8 380 81.6
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.3e-165 585.9 383 73.4
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 6.7e-165 584.3 383 73.1
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 1.1e-164 583.6 372 76.1
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 3.1e-162 575.5 386 74.9
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 2.6e-161 572.4 383 72.8
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 8.4e-160 567.4 382 74.9
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.1e-159 567.0 381 73.5
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.9e-159 566.2 382 73.6
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 5.5e-159 564.7 382 73.6
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 5.5e-159 564.7 372 73.9
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 7.1e-159 564.3 383 73.4
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 7.1e-159 564.3 384 72.4
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 1.2e-158 563.5 372 74.7
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 2.7e-158 562.4 381 71.1
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.0e-157 560.5 381 73.0
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.3e-157 559.3 381 72.7
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 3.9e-157 558.5 382 73.6
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 1.1e-156 557.0 383 71.5
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.9e-156 556.2 379 71.5
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 1.9e-156 556.2 381 72.4
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 5.7e-156 554.7 387 70.5
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 7.4e-156 554.3 381 71.7
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 9.6e-156 553.9 381 71.4
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 1.3e-155 553.5 377 74.0
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 2.1e-155 552.7 376 71.0
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 2.8e-155 552.4 381 71.4
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 1.4e-154 550.1 377 71.6
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 1.8e-154 549.7 377 73.2
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.8e-154 549.7 372 72.8
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 2.4e-154 549.3 383 72.1
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 3.1e-154 548.9 379 72.0
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 4.1e-154 548.5 386 70.7
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 4.1e-154 548.5 379 71.5
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 9.0e-154 547.4 381 69.6
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 1.2e-153 547.0 384 71.4
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 2.6e-153 545.8 372 71.5
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 2.6e-153 545.8 378 72.2
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 7.6e-153 544.3 373 71.8
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 1.0e-152 543.9 371 71.7
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 1.7e-152 543.1 372 71.5
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 2.2e-152 542.7 371 70.4
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 2.2e-152 542.7 378 70.9
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 5.0e-152 541.6 380 70.5
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 1.1e-151 540.4 371 71.2
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 1.9e-151 539.7 371 69.8
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 3.2e-151 538.9 378 70.9
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 5.5e-151 538.1 371 69.8
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 5.5e-151 538.1 371 69.8
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 5.5e-151 538.1 362 73.5
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 7.2e-151 537.7 373 70.8
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 2.1e-150 536.2 377 68.7
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 2.1e-150 536.2 373 70.2
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 7.9e-150 534.3 367 74.4
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 1.3e-149 533.5 384 68.5
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 6.7e-149 531.2 376 70.5
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.1e-148 530.4 378 69.6
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 1.5e-148 530.0 377 69.8
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.5e-148 530.0 384 69.5
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 1.9e-148 529.6 371 70.1
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 4.3e-148 528.5 371 70.4
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 5.7e-148 528.1 373 67.3
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 7.4e-148 527.7 382 70.2
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 9.7e-148 527.3 374 69.5
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.3e-147 526.9 376 67.8
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 3.7e-147 525.4 361 72.9
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 1.4e-146 523.5 386 69.4
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 1.4e-146 523.5 373 67.6
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 1.8e-146 523.1 382 68.3
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 1.8e-146 523.1 396 65.2
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 1.8e-146 523.1 375 68.3
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.1e-146 522.3 373 68.4
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 3.1e-146 522.3 350 75.4
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 4.1e-146 521.9 389 69.7
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 5.3e-146 521.5 372 69.9
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 5.9e-145 518.1 368 72.0
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 7.7e-145 517.7 446 60.5
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 7.7e-145 517.7 378 67.7
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 6.5e-144 514.6 368 70.7
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 8.5e-144 514.2 367 71.4
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.4e-143 513.5 378 66.7
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 7.2e-143 511.1 373 71.3
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.2e-142 510.4 373 70.5
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.2e-142 510.4 373 70.5
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 3.6e-142 508.8 376 67.6
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 1.8e-141 506.5 383 66.8
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 2.3e-141 506.1 372 68.0
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 8.8e-141 504.2 378 67.2
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 6.3e-139 498.0 377 68.2
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.1e-138 497.3 377 68.2
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 4.5e-129 465.3 376 63.0
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 2.5e-127 459.5 365 63.3
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 1.6e-126 456.8 372 62.6
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 4.1e-122 442.2 367 64.9
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 3.5e-121 439.1 394 60.2
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 9.4e-119 431.0 381 59.1
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 1.1e-114 417.5 375 58.7
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 9.1e-114 414.5 376 56.9
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.2e-113 414.1 371 59.3
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 5.9e-113 411.8 383 57.2
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 9.5e-111 404.4 374 59.6
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 4.7e-110 402.1 373 56.0
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 4.7e-110 402.1 383 54.6
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 2.0e-108 396.7 390 52.8
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.2e-102 377.5 376 51.3
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 4.4e-100 369.0 379 50.4
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 1.6e-97 360.5 278 64.7
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 1.4e-93 347.4 255 67.8
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 4.9e-91 339.0 321 57.6
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 2.0e-89 333.6 378 48.9
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 2.3e-85 320.1 325 53.2
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 8.9e-85 318.2 223 66.8
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 1.4e-77 294.3 391 44.0
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.2e-75 287.0 173 78.0
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.2e-75 287.0 173 78.0
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 1.7e-64 250.8 378 42.6
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 3.5e-57 226.5 167 65.9
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 7.6e-52 208.8 397 38.5
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 9.0e-45 185.3 113 77.0
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 6.7e-40 169.1 396 34.8
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 5.7e-39 166.0 136 64.7
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 9.6e-39 165.2 101 80.2
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.5e-36 157.9 147 59.9
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 8.2e-30 135.6 392 31.1
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 6.5e-27 125.9 83 68.7
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 3.5e-12 77.0 78 52.6
Os01g0594800 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 7.2e-10 69.3 124 37.1
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 6.1e-09 66.2 317 24.9
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.8e-08 64.7 73 47.9
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.8e-08 64.7 73 47.9


User provided reference genes

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