Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 7.2e-145 517.3 278 100.0
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.4e-63 247.3 331 53.2
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 7.5e-41 171.8 311 42.4
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 2.2e-40 170.2 328 42.1
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 4.5e-38 162.5 285 44.9
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 1.0e-34 151.4 307 42.7
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 4.0e-34 149.4 293 42.0
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 5.4e-31 139.0 294 42.2
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 2.9e-29 133.3 299 40.5
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 5.0e-29 132.5 298 39.3
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 7.2e-28 128.6 246 45.5
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 4.7e-27 125.9 280 39.6
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.8e-26 124.0 302 39.7
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 3.0e-26 123.2 269 39.4
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 1.2e-25 121.3 305 37.0
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 7.5e-25 118.6 317 39.4
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 7.5e-25 118.6 274 38.3
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 1.4e-23 114.4 284 38.4
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 2.3e-21 107.1 305 33.1
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 3.3e-20 103.2 304 34.9
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.6e-19 100.9 260 36.5
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 1.4e-18 97.8 310 33.2
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.8e-18 97.4 334 31.7
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 8.3e-16 88.6 308 33.4
unitig_899.g14576 Utricularia gibba HOM05D005407 ORTHO05D006544 8.3e-16 88.6 268 36.6
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.9e-15 87.4 327 30.0
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.9e-15 87.4 331 32.3
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.4e-15 87.0 341 32.3
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 4.1e-15 86.3 286 32.5
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 2.0e-14 84.0 300 30.0
HPP92_007853 Vanilla planifolia HOM05D005407 ORTHO05D006544 3.5e-14 83.2 302 29.1
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.0e-13 81.6 329 34.3
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.7e-13 80.9 305 28.2
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.7e-13 80.9 331 33.8
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 2.3e-13 80.5 307 32.6
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.9e-13 79.7 333 33.6
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 8.6e-13 78.6 289 32.5
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 1.1e-12 78.2 306 35.0
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.1e-12 78.2 305 31.1
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.5e-12 77.0 305 30.8
Oeu054177.1 Olea europaea HOM05D005407 ORTHO05D006544 2.5e-12 77.0 151 41.7
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.6e-11 74.3 319 30.7
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.1e-11 73.9 302 28.5
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 4.7e-11 72.8 188 39.4
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 8.0e-11 72.0 360 29.7
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 1.1e-10 71.6 351 30.8
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.4e-10 71.2 365 29.0
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 1.8e-10 70.9 316 30.4
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 1.8e-10 70.9 346 29.8
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 3.1e-10 70.1 318 28.9
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 3.1e-10 70.1 317 31.9
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 8.9e-10 68.6 326 31.9
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 8.9e-10 68.6 317 28.4
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.0e-09 67.4 254 30.7
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.6e-09 67.0 239 31.4
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.6e-09 67.0 270 29.6
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 4.4e-09 66.2 361 27.1
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 5.8e-09 65.9 189 33.9
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 7.5e-09 65.5 304 31.9
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 7.5e-09 65.5 250 31.6
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 9.8e-09 65.1 274 34.7
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 1.3e-08 64.7 346 28.6
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.3e-08 64.7 270 30.0
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 1.7e-08 64.3 241 34.9
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 1.7e-08 64.3 241 34.9
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.7e-08 64.3 298 32.9
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 3.7e-08 63.2 320 30.3
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 3.7e-08 63.2 321 29.0
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 3.7e-08 63.2 321 29.3
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 3.7e-08 63.2 348 30.7
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 3.7e-08 63.2 246 29.7
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 6.4e-08 62.4 307 33.2
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 8.3e-08 62.0 251 32.7
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 1.1e-07 61.6 214 33.2
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 1.1e-07 61.6 332 30.1
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 1.1e-07 61.6 288 33.3
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.4e-07 61.2 251 31.5
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 2.4e-07 60.5 333 30.3
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 4.1e-07 59.7 286 28.3
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 4.1e-07 59.7 286 28.3
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 4.1e-07 59.7 286 28.3
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 9.2e-07 58.5 214 35.0
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 1.2e-06 58.2 363 28.7
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 1.2e-06 58.2 254 28.0
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.2e-06 58.2 254 28.0
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.2e-06 58.2 254 28.0
HanXRQChr11g0322471 Helianthus annuus HOM05D005407 ORTHO05D006544 1.6e-06 57.8 298 26.5
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 2.1e-06 57.4 286 31.1
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 4.6e-06 56.2 238 33.2
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 6.0e-06 55.8 331 26.9
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 6.0e-06 55.8 298 32.2


User provided reference genes

Program Settings