Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 6.0e-294 1013.4 515 100.0
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 8.9e-56 222.2 460 38.5
FAN28G2901 Fragaria x ananassa HOM05D008620 ORTHO05D017975 8.1e-41 172.6 197 52.3
FAN23G0406 Fragaria x ananassa HOM05D008620 ORTHO05D017975 2.6e-39 167.5 199 51.8
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 1.1e-37 162.2 190 51.1
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 2.0e-31 141.4 490 33.9
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 2.2e-30 137.9 103 68.9
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 8.4e-30 136.0 102 68.6
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 1.4e-29 135.2 103 68.9
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 1.2e-28 132.1 102 67.6
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 2.1e-28 131.3 107 61.7
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 1.8e-27 128.3 86 73.3
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 1.8e-27 128.3 125 58.4
FAN26G1939 Fragaria x ananassa HOM05D008620 ORTHO05D017975 3.3e-26 124.0 160 47.5
Os03g0143150 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D017975 5.6e-26 123.2 307 38.4
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 2.4e-24 117.9 78 71.8
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 5.3e-24 116.7 78 71.8
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 1.0e-22 112.5 86 68.6
Zm00001eb325460 Zea mays HOM05D008620 ORTHO05D017975 5.5e-21 106.7 294 38.1
HPP92_017759 Vanilla planifolia HOM05D008620 ORTHO05D017975 6.0e-20 103.2 179 41.3
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 2.3e-19 101.3 144 45.8
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 5.1e-19 100.1 101 57.4
Zm00001eb082800 Zea mays HOM05D008620 ORTHO05D017975 8.7e-19 99.4 322 37.0
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 4.8e-17 93.6 99 52.5
Zm00001eb237130 Zea mays HOM05D008620 ORTHO05D011304 4.8e-17 93.6 136 45.6
MBI12_g22442_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 1.7e-14 85.1 109 49.5
FAN05G3675 Fragaria x ananassa HOM05D017251 ORTHO05D011304 6.5e-14 83.2 119 42.9
ATR0855G001 Amborella trichopoda HOM05D008620 ORTHO05D011304 1.1e-13 82.4 84 54.8
Lsat_1_v5_gn_2_129941 Lactuca sativa HOM05D008620 ORTHO05D011304 4.2e-13 80.5 69 60.9
SGA_v2.0_scaffold196G40916 Striga asiatica HOM05D008620 ORTHO05D030384 2.1e-12 78.2 250 34.4
MBI13_g43924_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 3.5e-12 77.4 130 44.6
FAN26G1174 Fragaria x ananassa HOM05D008620 ORTHO05D025601 1.8e-11 75.1 71 59.2
Os03g0430575 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 1.5e-10 72.0 128 40.6
SGA_v2.0_scaffold146G36260 Striga asiatica HOM05D022033 ORTHO05D020747 3.3e-10 70.9 64 59.4
Zm00001eb403900 Zea mays HOM05D018476 ORTHO05D030384 4.3e-10 70.5 367 33.5
FAN20G0165 Fragaria x ananassa HOM05D017251 ORTHO05D019846 3.7e-09 67.4 187 36.4
SGA_v2.0_scaffold186G40148 Striga asiatica HOM05D008620 ORTHO05D011304 1.1e-08 65.9 100 39.0
FAN15G3198 Fragaria x ananassa HOM05D017251 ORTHO05D019846 1.8e-08 65.1 137 36.5
MBI13_g43923_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 1.2e-07 62.4 86 48.8
FAN06G2930 Fragaria x ananassa HOM05D043455 ORTHO05D204600 1.3e-06 58.9 131 36.6
FAN06G3620 Fragaria x ananassa HOM05D043455 ORTHO05D206149 1.3e-06 58.9 131 36.6
COL.COLO4_03310 Corchorus olitorius HOM05D008620 ORTHO05D044731 2.2e-06 58.2 69 46.4
Nitab4.5_0000287g0120 Nicotiana tabacum HOM05D008620 ORTHO05D011304 2.2e-06 58.2 69 49.3
HanXRQChr05g0128851 Helianthus annuus HOM05D028084 ORTHO05D033999 3.8e-06 57.4 66 45.5


User provided reference genes

Program Settings