Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold143G35733 Striga asiatica HOM05D004220 ORTHO05D006217 3.2e-215 751.5 384 100.0
SGA_v2.0_scaffold23G10178 Striga asiatica HOM05D004220 ORTHO05D006217 5.6e-196 687.6 387 91.2
SalBow2G3345 Salvia bowleyana HOM05D004220 ORTHO05D006217 1.2e-187 659.8 395 86.1
Migut.E00492 Erythranthe guttata HOM05D004220 ORTHO05D006217 1.1e-186 656.8 388 86.9
MSTRG.13631 Avicennia marina HOM05D004220 ORTHO05D006217 2.0e-185 652.5 384 86.5
Oeu044002.1 Olea europaea HOM05D004220 ORTHO05D006217 4.8e-179 631.3 388 82.7
COL.COLO4_27642 Corchorus olitorius HOM05D004220 ORTHO05D006217 9.6e-172 607.1 350 87.1
TAR371G0933 Trochodendron aralioides HOM05D004220 ORTHO05D006217 1.3e-171 606.7 384 80.5
Manes.15G135500 Manihot esculenta HOM05D004220 ORTHO05D006217 1.6e-171 606.3 375 81.1
Eucgr.B03437 Eucalyptus grandis HOM05D004220 ORTHO05D006217 4.8e-171 604.7 382 81.4
Atru.chr11.900 Acer truncatum HOM05D004220 ORTHO05D006217 1.4e-170 603.2 368 82.3
Actinidia12400 Actinidia chinensis HOM05D004220 ORTHO05D006217 1.4e-170 603.2 349 88.0
TWI74G0333 Tripterygium wilfordii HOM05D004220 ORTHO05D006217 1.8e-170 602.8 376 81.9
Potri.008G135700 Populus trichocarpa HOM05D004220 ORTHO05D006217 2.4e-170 602.4 360 83.3
Nn4g24652 Nelumbo nucifera HOM05D004220 ORTHO05D006217 3.1e-170 602.1 385 78.4
Lj6A736T83 Lonicera japonica HOM05D004220 ORTHO05D006217 4.0e-170 601.7 373 83.4
Gohir.D13G025700 Gossypium hirsutum HOM05D004220 ORTHO05D006217 5.3e-170 601.3 350 86.3
Gorai.013G028900 Gossypium raimondii HOM05D004220 ORTHO05D006217 5.3e-170 601.3 350 86.3
Sabra08G0103700 Salix brachista HOM05D004220 ORTHO05D006217 5.3e-170 601.3 367 82.0
Glyma.08G047800 Glycine max HOM05D004220 ORTHO05D006217 1.2e-169 600.1 380 80.0
LjContig00081g0015221 Lotus japonicus HOM05D004220 ORTHO05D006217 1.2e-169 600.1 380 80.0
VMungo0251G0500 Vigna mungo HOM05D004220 ORTHO05D006217 1.2e-169 600.1 380 80.0
Hund08335 Selenicereus undatus HOM05D004220 ORTHO05D006217 1.5e-169 599.7 385 81.0
Cpa.g.sc2.184 Carica papaya HOM05D004220 ORTHO05D006217 2.0e-169 599.4 383 80.7
Haze_10865 Corylus avellana HOM05D004220 ORTHO05D006217 3.4e-169 598.6 380 81.1
Lj4g0025833 Lotus japonicus HOM05D004220 ORTHO05D006217 3.4e-169 598.6 380 79.2
Lsat_1_v5_gn_8_35340 Lactuca sativa HOM05D004220 ORTHO05D006217 5.8e-169 597.8 384 80.5
Phvul.002G323900 Phaseolus vulgaris HOM05D004220 ORTHO05D006217 5.8e-169 597.8 380 79.5
Duzib248G1338 Durio zibethinus HOM05D004220 ORTHO05D006217 7.6e-169 597.4 355 84.5
Gohir.A13G026900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 7.6e-169 597.4 350 86.3
Lalb_Chr16g0387441 Lupinus albus HOM05D004220 ORTHO05D006217 7.6e-169 597.4 350 85.1
Thecc.02G309700 Theobroma cacao HOM05D004220 ORTHO05D006217 1.3e-168 596.7 355 84.5
unitig_27.g25162 Utricularia gibba HOM05D004220 ORTHO05D006217 1.3e-168 596.7 373 83.1
Duzib251G0717 Durio zibethinus HOM05D004220 ORTHO05D006217 1.7e-168 596.3 350 85.7
Solyc01g005250.4 Solanum lycopersicum HOM05D004220 ORTHO05D006217 2.2e-168 595.9 385 79.5
Sopen01g001280 Solanum pennellii HOM05D004220 ORTHO05D006217 2.2e-168 595.9 385 79.5
PGSC0003DMG400022796 Solanum tuberosum HOM05D004220 ORTHO05D006217 2.2e-168 595.9 388 78.9
arahy.Tifrunner.gnm1.ann1.GF1W8W Arachis hypogaea HOM05D004220 ORTHO05D006217 2.9e-168 595.5 351 85.5
Ciclev10015633m.g Citrus clementina HOM05D004220 ORTHO05D006217 2.9e-168 595.5 347 85.9
Potri.010G105300 Populus trichocarpa HOM05D004220 ORTHO05D006217 3.8e-168 595.1 367 81.2
Glyma.05G240700 Glycine max HOM05D004220 ORTHO05D006217 4.9e-168 594.7 359 82.7
Psat4g004640 Pisum sativum HOM05D004220 ORTHO05D006217 4.9e-168 594.7 366 80.9
Ca_17252_v3 Cicer arietinum L. HOM05D004220 ORTHO05D006217 6.4e-168 594.3 351 85.2
QL03p036195 Quercus lobata HOM05D004220 ORTHO05D006217 6.4e-168 594.3 350 85.4
Cfa015032 Carpinus fangiana HOM05D004220 ORTHO05D006217 8.4e-168 594.0 375 81.1
Lalb_Chr09g0330781 Lupinus albus HOM05D004220 ORTHO05D006217 1.4e-167 593.2 369 81.8
CiPaw.06G053400 Carya illinoinensis HOM05D004220 ORTHO05D006217 1.9e-167 592.8 382 79.6
ECA233G3753 Erigeron canadensis HOM05D004220 ORTHO05D006217 4.2e-167 591.7 381 79.8
Gorai.008G170900 Gossypium raimondii HOM05D004220 ORTHO05D006217 7.1e-167 590.9 355 83.7
Lalb_Chr05g0222081 Lupinus albus HOM05D004220 ORTHO05D006217 7.1e-167 590.9 349 84.0
Dinv26357 Davidia involucrata HOM05D004220 ORTHO05D006217 9.3e-167 590.5 388 78.4
AUR62017612 Chenopodium quinoa HOM05D004220 ORTHO05D006217 1.2e-166 590.1 345 87.2
Gohir.A12G154900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 1.2e-166 590.1 355 83.4
AUR62015160 Chenopodium quinoa HOM05D004220 ORTHO05D006217 1.6e-166 589.7 345 87.5
Dinv18907 Davidia involucrata HOM05D004220 ORTHO05D006217 1.6e-166 589.7 389 78.1
Medtr8g105860 Medicago truncatula HOM05D004220 ORTHO05D006217 3.5e-166 588.6 368 81.0
Potri.010G105000 Populus trichocarpa HOM05D004220 ORTHO05D006217 1.8e-165 586.3 345 84.3
Nitab4.5_0000640g0100 Nicotiana tabacum HOM05D004220 ORTHO05D006217 2.3e-165 585.9 345 85.5
PGR102G3065 Punica granatum HOM05D004220 ORTHO05D006217 2.3e-165 585.9 377 80.6
MBI05_g37451_MAGBIO Magnolia biondii HOM05D004220 ORTHO05D006217 5.1e-165 584.7 371 80.1
BcaB02g06550 Brassica carinata HOM05D004220 ORTHO05D006217 8.7e-165 583.9 371 80.1
FvH4_4g33450 Fragaria vesca HOM05D004220 ORTHO05D006217 1.1e-164 583.6 361 81.7
HanXRQChr12g0364941 Helianthus annuus HOM05D004220 ORTHO05D006217 2.5e-164 582.4 388 79.4
Prupe.1G334400 Prunus persica HOM05D004220 ORTHO05D006217 2.5e-164 582.4 385 78.2
FAN07G0058 Fragaria x ananassa HOM05D004220 ORTHO05D006217 3.3e-164 582.0 353 82.7
FAN07G1238 Fragaria x ananassa HOM05D004220 ORTHO05D006217 3.3e-164 582.0 353 82.7
FAN17G0395 Fragaria x ananassa HOM05D004220 ORTHO05D006217 3.3e-164 582.0 353 82.7
AL1G26830 Arabidopsis lyrata HOM05D004220 ORTHO05D006217 4.3e-164 581.6 371 80.3
FAN12G0660 Fragaria x ananassa HOM05D004220 ORTHO05D006217 4.3e-164 581.6 361 81.4
Sc17g0004200 Simmondsia chinensis HOM05D004220 ORTHO05D006217 4.3e-164 581.6 358 81.8
BraA06t24264Z Brassica rapa HOM05D004220 ORTHO05D006217 5.6e-164 581.3 371 80.1
DCAR_022139 Daucus carota HOM05D004220 ORTHO05D006217 5.6e-164 581.3 374 80.2
Rhsim09G0088900 Rhododendron simsii HOM05D004220 ORTHO05D006217 5.6e-164 581.3 380 80.3
AT1G14810 Arabidopsis thaliana HOM05D004220 ORTHO05D006217 7.4e-164 580.9 371 80.1
ATR0763G027 Amborella trichopoda HOM05D004220 ORTHO05D006217 1.3e-163 580.1 347 84.4
A06p10860 Brassica napus HOM05D004220 ORTHO05D006217 1.3e-163 580.1 371 79.8
Aqoxy6G01748 Aquilegia oxysepala HOM05D004220 ORTHO05D006217 1.6e-163 579.7 376 78.2
SEGI_30189 Sequoiadendron giganteum HOM05D004220 ORTHO05D006217 1.6e-163 579.7 348 84.2
Thhalv10007952m.g Eutrema salsugineum HOM05D004220 ORTHO05D006217 2.8e-163 578.9 375 79.2
EL10Ac9g22864 Beta vulgaris HOM05D004220 ORTHO05D006217 3.7e-163 578.6 398 75.9
CANSAT78G0088 Cannabis sativa HOM05D004220 ORTHO05D006217 3.7e-163 578.6 382 77.5
DCAR_002675 Daucus carota HOM05D004220 ORTHO05D006217 3.7e-163 578.6 351 83.5
RcHm_v2.0_Chr4g0442761 Rosa chinensis HOM05D004220 ORTHO05D006217 3.7e-163 578.6 351 82.9
CDE07G1395 Ceratophyllum demersum HOM05D004220 ORTHO05D006217 4.8e-163 578.2 377 77.2
PSO302G0185 Papaver somniferum HOM05D004220 ORTHO05D006217 4.8e-163 578.2 384 77.9
Sp1g13250 Schrenkiella parvula HOM05D004220 ORTHO05D006217 4.8e-163 578.2 371 78.7
FAN22G0209 Fragaria x ananassa HOM05D004220 ORTHO05D006217 8.1e-163 577.4 372 79.3
MD13G1019500 Malus domestica HOM05D004220 ORTHO05D006217 8.1e-163 577.4 356 81.5
CARHR015340 Cardamine hirsuta HOM05D004220 ORTHO05D006217 1.4e-162 576.6 371 79.2
A08p31810 Brassica napus HOM05D004220 ORTHO05D006217 2.4e-162 575.9 380 78.4
THA.LOC104805088 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 2.4e-162 575.9 372 79.0
BcaB03g13081 Brassica carinata HOM05D004220 ORTHO05D006217 3.1e-162 575.5 375 79.2
unitig_29.g31883 Utricularia gibba HOM05D004220 ORTHO05D006217 4.0e-162 575.1 366 81.7
ClCG07G005480 Citrullus lanatus HOM05D004220 ORTHO05D006217 5.3e-162 574.7 368 79.9
PSO541G1847 Papaver somniferum HOM05D004220 ORTHO05D006217 6.9e-162 574.3 384 77.1
C05p12790 Brassica napus HOM05D004220 ORTHO05D006217 9.0e-162 573.9 371 79.0
Carub.0001s1460 Capsella rubella HOM05D004220 ORTHO05D006217 1.2e-161 573.5 374 78.9
MD16G1017700 Malus domestica HOM05D004220 ORTHO05D006217 1.2e-161 573.5 380 78.4
Aa31LG1G290 Aethionema arabicum HOM05D004220 ORTHO05D006217 1.5e-161 573.2 370 78.6
Sed0000427 Sechium edule HOM05D004220 ORTHO05D006217 2.0e-161 572.8 368 80.4
BcaC05g25401 Brassica carinata HOM05D004220 ORTHO05D006217 3.4e-161 572.0 371 78.7
BolC5t30019H Brassica oleracea HOM05D004220 ORTHO05D006217 3.4e-161 572.0 371 78.7
CAN.G282.120 Capsicum annuum HOM05D004220 ORTHO05D006217 3.4e-161 572.0 345 83.2
BcaC07g38762 Brassica carinata HOM05D004220 ORTHO05D006217 4.5e-161 571.6 375 78.7
C08p16920 Brassica napus HOM05D004220 ORTHO05D006217 4.5e-161 571.6 375 78.7
BolC8t49319H Brassica oleracea HOM05D004220 ORTHO05D006217 4.5e-161 571.6 375 78.7
BraA08t35103Z Brassica rapa HOM05D004220 ORTHO05D006217 4.5e-161 571.6 375 78.7
CsaV3_5G014440 Cucumis sativus L. HOM05D004220 ORTHO05D006217 1.3e-160 570.1 368 79.3
MELO3C010427.2 Cucumis melo HOM05D004220 ORTHO05D006217 1.7e-160 569.7 347 82.4
Sed0023691 Sechium edule HOM05D004220 ORTHO05D006217 2.2e-160 569.3 372 79.3
THA.LOC104824123 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 8.4e-160 567.4 345 82.9
Zm00001eb214360 Zea mays HOM05D004220 ORTHO05D006217 7.1e-159 564.3 361 79.2
Pp3c5_10760 Physcomitrium patens HOM05D004220 ORTHO05D006217 2.1e-158 562.8 361 78.9
AagrBONN_evm.TU.Sc2ySwM_368.1674 Anthoceros agrestis HOM05D004220 ORTHO05D006217 1.8e-157 559.7 358 79.9
Gohir.D12G158100 Gossypium hirsutum HOM05D004220 ORTHO05D006217 3.0e-157 558.9 377 76.9
TPR.G19271 Trifolium pratense HOM05D004220 ORTHO05D006217 5.7e-156 554.7 322 86.0
Mapoly0086s0044 Marchantia polymorpha HOM05D004220 ORTHO05D006217 2.6e-153 545.8 357 76.5
Os03g0760700 Oryza sativa ssp. japonica HOM05D004220 ORTHO05D006217 7.2e-151 537.7 348 78.4
SMO119G0035 Selaginella moellendorffii HOM05D004220 ORTHO05D006217 7.2e-151 537.7 345 78.8
HanXRQChr06g0171081 Helianthus annuus HOM05D004220 ORTHO05D006217 9.3e-151 537.3 397 73.8
Peaxi162Scf00275g00215 Petunia axillaris HOM05D004220 ORTHO05D006217 3.9e-149 531.9 369 74.8
CBR_g30041 Chara braunii HOM05D004220 ORTHO05D006217 9.7e-148 527.3 323 80.8
Ah.05g168430 Amaranthus hybridus HOM05D004220 ORTHO05D006217 2.8e-147 525.8 307 86.3
HPP92_001024 Vanilla planifolia HOM05D004220 ORTHO05D006217 3.0e-141 505.8 323 79.9
Nitab4.5_0000198g0090 Nicotiana tabacum HOM05D004220 ORTHO05D006217 2.0e-140 503.1 294 85.7
TAR622G1230 Trochodendron aralioides HOM05D004220 ORTHO05D006217 6.5e-136 488.0 294 82.0
Cre09.g389689 Chlamydomonas reinhardtii HOM05D004220 ORTHO05D006217 1.5e-132 476.9 369 67.5
MCO01G646 Micromonas commoda HOM05D004220 ORTHO05D006217 1.1e-130 470.7 348 67.5
Actinidia36618 Actinidia chinensis HOM05D004220 ORTHO05D006217 2.0e-121 439.9 315 74.6
PRCOL_00000291 Prasinoderma coloniale HOM05D004220 ORTHO05D006217 1.8e-117 426.8 306 70.6
GSVIVG01011646001 Vitis vinifera HOM05D004220 ORTHO05D006217 3.4e-108 396.0 225 88.9
Nn3g18412 Nelumbo nucifera HOM05D004220 ORTHO05D006217 8.6e-88 328.2 186 88.2
Cc11_g06980 Coffea canephora HOM05D004220 ORTHO05D006217 1.5e-87 327.4 188 87.2
TAR629G1713 Trochodendron aralioides HOM05D004220 ORTHO05D006217 7.6e-68 261.9 197 67.5
TAR629G0578 Trochodendron aralioides HOM05D004220 ORTHO05D006217 6.4e-67 258.8 197 66.5
MD13G1041100 Malus domestica HOM05D004220 ORTHO05D006217 1.4e-53 214.5 240 53.8
Aqoxy6G01744 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 3.4e-52 209.9 138 74.6
BolC8t52095H Brassica oleracea HOM05D004220 ORTHO05D001325 1.1e-50 204.9 118 83.9
C08p45410 Brassica napus HOM05D004220 ORTHO05D001325 4.2e-50 203.0 118 83.1
TAR629G0842 Trochodendron aralioides HOM05D004220 ORTHO05D006217 1.6e-49 201.1 170 64.7
TAR629G3246 Trochodendron aralioides HOM05D004220 ORTHO05D006217 1.6e-49 201.1 170 64.7
BcaC05g25398 Brassica carinata HOM05D000822 ORTHO05D002021 4.6e-49 199.5 177 61.0
Aqoxy2G01924 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 3.3e-47 193.4 125 74.4
Aqoxy7G02277 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 2.8e-46 190.3 121 75.2
MSTRG.2121 Avicennia marina HOM05D004220 ORTHO05D017372 6.7e-40 169.1 121 73.6
CsaV3_5G014420 Cucumis sativus L. HOM05D004220 ORTHO05D006217 1.6e-38 164.5 97 81.4
RcHm_v2.0_Chr2g0166251 Rosa chinensis HOM05D004220 ORTHO05D006217 1.1e-37 161.8 102 80.4
Aqoxy3G02388 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.3e-35 154.8 169 52.7
CDE12G0826 Ceratophyllum demersum HOM05D004220 ORTHO05D017372 1.3e-32 144.8 127 58.3
BcaC07g41538 Brassica carinata HOM05D001471 ORTHO05D001325 3.0e-32 143.7 119 68.9
Aqoxy5G02471 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 6.7e-32 142.5 114 64.9
Aqoxy5G02966 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 5.7e-31 139.4 113 63.7
Aqoxy5G02658 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 7.4e-31 139.0 112 64.3
Actinidia36617 Actinidia chinensis HOM05D004220 ORTHO05D006217 1.6e-30 137.9 77 87.0
QL03p036261 Quercus lobata HOM05D004220 ORTHO05D006217 1.6e-30 137.9 78 87.2
AL7G45370 Arabidopsis lyrata HOM05D004220 ORTHO05D006217 3.7e-30 136.7 79 83.5
HanXRQChr08g0220351 Helianthus annuus HOM05D004220 ORTHO05D006217 2.2e-27 127.5 88 72.7
BraA09t39195Z Brassica rapa HOM05D004220 ORTHO05D027881 5.0e-27 126.3 71 87.3
C05p12760 Brassica napus HOM05D004220 ORTHO05D027881 1.9e-26 124.4 67 86.6
A09p36790 Brassica napus HOM05D004220 ORTHO05D027881 1.2e-25 121.7 72 83.3
BraSC56t46400Z Brassica rapa HOM05D004220 ORTHO05D027881 6.7e-24 115.9 72 81.9
TAR633G1096 Trochodendron aralioides HOM05D004220 ORTHO05D000192 1.6e-17 94.7 60 75.0
Actinidia26742 Actinidia chinensis HOM05D004220 ORTHO05D006217 1.8e-16 91.3 52 82.7
Cfa024397 Carpinus fangiana HOM05D004220 ORTHO05D043712 7.4e-15 85.9 375 26.1
BcaB08g34410 Brassica carinata HOM05D001471 ORTHO05D001325 2.8e-14 84.0 81 59.3
HanXRQChr17g0555841 Helianthus annuus HOM05D004220 ORTHO05D006217 8.2e-14 82.4 58 69.0
C09p39400 Brassica napus HOM05D004220 ORTHO05D039209 4.4e-07 60.1 40 80.0


User provided reference genes

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