Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 6.3e-160 567.4 286 100.0
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 2.4e-87 326.2 299 64.2
SGA_v2.0_scaffold12G06013 Striga asiatica HOM05D003426 ORTHO05D003816 5.5e-71 271.9 132 100.0
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 5.7e-28 129.0 262 37.4
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.1e-23 114.8 274 33.6
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.4e-21 107.8 263 33.1
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.5e-20 104.4 246 35.4
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 4.1e-18 96.3 320 29.4
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 7.0e-18 95.5 326 28.8
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 7.7e-17 92.0 254 31.5
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.0e-16 91.7 252 29.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.3e-16 91.3 279 31.9
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 2.9e-16 90.1 240 31.2
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 3.8e-16 89.7 247 31.6
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 5.0e-16 89.4 279 28.0
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.0e-16 89.4 256 30.1
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 8.5e-16 88.6 263 33.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.9e-15 87.4 272 31.6
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.2e-15 86.3 311 29.3
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.2e-14 84.7 312 28.2
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.2e-14 84.7 277 31.8
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 3.6e-14 83.2 260 30.8
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 3.6e-14 83.2 235 32.3
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.0e-13 81.6 118 39.0
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 1.0e-13 81.6 275 29.1
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.8e-13 80.9 257 28.8
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 5.2e-13 79.3 257 28.4
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 6.8e-13 79.0 252 27.8
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 1.5e-12 77.8 257 30.4
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.0e-12 77.4 248 27.8
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 2.6e-12 77.0 276 27.9
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.6e-12 77.0 187 29.4
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.6e-12 77.0 119 37.8
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 4.4e-12 76.3 258 31.4
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 2.2e-11 73.9 251 29.9
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 2.8e-11 73.6 227 30.0
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 4.9e-11 72.8 240 28.8
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 4.9e-11 72.8 236 30.1
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 8.3e-11 72.0 312 26.0
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.8e-10 70.9 86 44.2
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.8e-10 70.9 95 42.1
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 2.4e-10 70.5 225 30.2
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 3.1e-10 70.1 233 32.2
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 4.5e-09 66.2 230 27.4
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 5.9e-09 65.9 92 41.3
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 5.9e-09 65.9 247 27.5
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 1.0e-08 65.1 268 27.2
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 1.7e-08 64.3 225 28.4
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 2.3e-08 63.9 242 25.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.3e-08 63.9 235 27.7
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 2.3e-08 63.9 226 27.9
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 3.8e-08 63.2 230 28.3
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 3.8e-08 63.2 267 27.0
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.0e-08 62.8 218 29.4
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 1.1e-07 61.6 90 40.0
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.5e-07 60.5 56 44.6
CARHR184730 Cardamine hirsuta HOM05D012895 ORTHO05D014428 2.5e-07 60.5 243 26.3
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 2.5e-07 60.5 239 25.9
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 2.5e-07 60.5 239 25.9
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 3.3e-07 60.1 222 27.9
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 3.3e-07 60.1 222 27.9
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 3.3e-07 60.1 95 37.9
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 3.3e-07 60.1 78 39.7
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 4.3e-07 59.7 241 26.6
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 4.3e-07 59.7 264 26.5
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 4.3e-07 59.7 232 22.4
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 5.6e-07 59.3 283 26.1
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 7.3e-07 58.9 240 27.1
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 7.3e-07 58.9 245 24.9
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 7.3e-07 58.9 235 25.5
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 7.3e-07 58.9 69 44.9
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.2e-06 58.2 70 40.0
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 1.2e-06 58.2 225 27.6
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 2.1e-06 57.4 225 28.0
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 2.8e-06 57.0 234 24.4
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 2.8e-06 57.0 89 33.7
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 2.8e-06 57.0 89 33.7
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 4.7e-06 56.2 240 24.6
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 6.1e-06 55.8 241 24.5
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 8.0e-06 55.5 88 38.6
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 8.0e-06 55.5 91 34.1


User provided reference genes

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