Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 7.9e-49 196.8 101 100.0
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.0e-35 153.3 90 81.1
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.3e-27 126.3 86 67.4
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 1.9e-26 122.5 92 62.0
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.9e-26 122.5 92 62.0
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.9e-26 122.5 92 62.0
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.9e-26 122.5 99 58.6
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 2.5e-26 122.1 104 62.5
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 3.2e-26 121.7 90 67.8
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 4.2e-26 121.3 86 67.4
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.5e-26 120.9 99 57.6
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 7.2e-26 120.6 95 63.2
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 9.4e-26 120.2 95 62.1
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 1.2e-25 119.8 90 60.0
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 2.1e-25 119.0 93 59.1
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.1e-25 119.0 87 62.1
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 2.7e-25 118.6 90 60.0
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.7e-25 118.6 88 64.8
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 3.6e-25 118.2 84 69.0
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 6.1e-25 117.5 91 62.6
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 7.9e-25 117.1 91 62.6
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 7.9e-25 117.1 91 62.6
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.0e-24 116.7 91 62.6
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.0e-24 116.7 91 64.8
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.8e-24 115.9 86 69.8
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 1.8e-24 115.9 91 64.8
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.8e-24 115.9 80 70.0
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.3e-24 115.5 98 61.2
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 2.3e-24 115.5 88 63.6
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.3e-24 115.5 85 63.5
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.3e-24 115.5 86 64.0
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 2.3e-24 115.5 95 60.0
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 2.3e-24 115.5 86 61.6
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 3.0e-24 115.2 83 61.4
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 3.9e-24 114.8 88 62.5
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 3.9e-24 114.8 86 61.6
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.9e-24 114.8 85 63.5
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 3.9e-24 114.8 80 68.8
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 5.1e-24 114.4 86 66.3
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.1e-24 114.4 85 63.5
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 5.1e-24 114.4 83 65.1
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 6.7e-24 114.0 85 67.1
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 6.7e-24 114.0 77 67.5
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 8.8e-24 113.6 87 64.4
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 8.8e-24 113.6 87 64.4
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 8.8e-24 113.6 97 57.7
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 8.8e-24 113.6 89 60.7
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 1.5e-23 112.8 89 62.9
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 2.5e-23 112.1 88 63.6
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 2.5e-23 112.1 91 61.5
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 3.3e-23 111.7 91 60.4
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 3.3e-23 111.7 75 66.7
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 3.3e-23 111.7 91 60.4
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 4.3e-23 111.3 78 65.4
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 4.3e-23 111.3 87 63.2
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 4.3e-23 111.3 74 64.9
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 7.4e-23 110.5 89 60.7
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 7.4e-23 110.5 76 65.8
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 9.7e-23 110.2 85 61.2
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 9.7e-23 110.2 78 65.4
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 1.3e-22 109.8 74 64.9
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.7e-22 109.4 85 61.2
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 2.2e-22 109.0 81 61.7
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 3.7e-22 108.2 78 60.3
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 8.2e-22 107.1 78 59.0
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 8.2e-22 107.1 82 63.4
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.1e-21 106.7 72 66.7
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 1.8e-21 105.9 90 58.9
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 1.8e-21 105.9 87 57.5
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.8e-21 105.9 84 65.5
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 3.1e-21 105.1 92 56.5
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 2.6e-20 102.1 93 55.9
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 2.6e-20 102.1 81 58.0
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 4.5e-20 101.3 94 52.1
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 3.8e-19 98.2 92 53.3
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 6.5e-19 97.4 90 55.6
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 6.5e-19 97.4 92 52.2
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 1.4e-18 96.3 71 63.4
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.4e-18 96.3 69 65.2
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 7.2e-18 94.0 65 66.2
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 3.6e-17 91.7 90 51.1
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 3.6e-17 91.7 71 57.7
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.4e-16 89.7 82 53.7
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.8e-13 79.3 84 45.2
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 3.1e-13 78.6 50 74.0
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.7e-11 72.8 47 70.2
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.7e-11 72.8 60 55.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 2.9e-11 72.0 77 48.1
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 8.5e-11 70.5 51 66.7
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 2.0e-07 59.3 41 63.4
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.6e-07 58.9 93 38.7
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 4.8e-06 54.7 46 56.5


User provided reference genes

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