Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold141G35594 Striga asiatica HOM05D017480 ORTHO05D026194 6.9e-150 533.9 258 100.0
SGA_v2.0_scaffold484G52360 Striga asiatica HOM05D017480 ORTHO05D026194 1.9e-94 349.7 228 79.4
SGA_v2.0_scaffold14G07025 Striga asiatica HOM05D017480 ORTHO05D026194 2.8e-58 229.6 163 73.6
SGA_v2.0_scaffold351G49665 Striga asiatica HOM05D017480 ORTHO05D026194 5.1e-36 155.6 87 86.2
SGA_v2.0_scaffold642G53319 Striga asiatica HOM05D017480 ORTHO05D026194 6.1e-29 132.1 181 44.2
SGA_v2.0_scaffold25G10745 Striga asiatica HOM05D007893 ORTHO05D010042 4.8e-26 122.5 63 95.2
Migut.O00264 Erythranthe guttata HOM05D007893 ORTHO05D010042 2.6e-19 100.1 67 64.2
SGA_v2.0_scaffold98G29322 Striga asiatica HOM05D017480 ORTHO05D406041 2.8e-18 96.7 65 69.2
MSTRG.23210 Avicennia marina HOM05D007893 ORTHO05D010042 3.1e-17 93.2 63 66.7
SalBow6G7259 Salvia bowleyana HOM05D007893 ORTHO05D010042 7.7e-16 88.6 62 67.7
Glyma.01G016100 Glycine max HOM05D007893 ORTHO05D010042 6.8e-12 75.5 63 55.6
Phvul.002G138600 Phaseolus vulgaris HOM05D007893 ORTHO05D010042 6.8e-12 75.5 61 57.4
Thecc.03G306900 Theobroma cacao HOM05D007893 ORTHO05D010042 8.8e-12 75.1 63 55.6
COL.COLO4_16973 Corchorus olitorius HOM05D000070 ORTHO05D007358 1.2e-11 74.7 67 52.2
Lalb_Chr08g0231971 Lupinus albus HOM05D007893 ORTHO05D010042 2.0e-11 73.9 63 54.0
Hma1.2p1_2831F.1_g329220 Hydrangea macrophylla HOM05D007893 ORTHO05D010042 2.6e-11 73.6 58 58.6
GSVIVG01013113001 Vitis vinifera HOM05D007893 ORTHO05D010042 3.4e-11 73.2 63 55.6
Oeu023344.1 Olea europaea HOM05D007893 ORTHO05D010042 4.4e-11 72.8 53 60.4
Oeu023345.1 Olea europaea HOM05D007893 ORTHO05D010042 4.4e-11 72.8 53 60.4
VMungo1215G2510 Vigna mungo HOM05D007893 ORTHO05D010042 5.7e-11 72.4 58 58.6
Nitab4.5_0000256g0090 Nicotiana tabacum HOM05D007893 ORTHO05D010042 7.5e-11 72.0 64 53.1
Nitab4.5_0009549g0020 Nicotiana tabacum HOM05D007893 ORTHO05D010042 2.2e-10 70.5 64 53.1
Duzib068G1049 Durio zibethinus HOM05D007893 ORTHO05D010042 4.8e-10 69.3 63 54.0
Sc22g0001680 Simmondsia chinensis HOM05D007893 ORTHO05D010042 8.3e-10 68.6 59 54.2
arahy.Tifrunner.gnm1.ann1.40GBPJ Arachis hypogaea HOM05D007893 ORTHO05D010042 1.1e-09 68.2 67 47.8
CiPaw.12G066600 Carya illinoinensis HOM05D007893 ORTHO05D010042 1.1e-09 68.2 57 54.4
Cc08_g03180 Coffea canephora HOM05D007893 ORTHO05D010042 1.1e-09 68.2 76 44.7
Cfa012483 Carpinus fangiana HOM05D007893 ORTHO05D010042 1.4e-09 67.8 53 60.4
arahy.Tifrunner.gnm1.ann1.7C2XF6 Arachis hypogaea HOM05D007893 ORTHO05D010042 1.8e-09 67.4 58 55.2
Atru.chr2.2027 Acer truncatum HOM05D007893 ORTHO05D010042 2.4e-09 67.0 48 62.5
Atru.chr2.2039 Acer truncatum HOM05D007893 ORTHO05D010042 2.4e-09 67.0 48 62.5
Peaxi162Scf00265g00033 Petunia axillaris HOM05D007893 ORTHO05D010042 2.4e-09 67.0 81 42.0
TWI81G0227 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 2.4e-09 67.0 61 50.8
Nitab4.5_0005203g0030 Nicotiana tabacum HOM05D007893 ORTHO05D010042 3.1e-09 66.6 63 47.6
QL05p025350 Quercus lobata HOM05D007893 ORTHO05D010042 3.1e-09 66.6 63 52.4
arahy.Tifrunner.gnm1.ann1.AUE0A3 Arachis hypogaea HOM05D007893 ORTHO05D010042 4.1e-09 66.2 58 53.4
Haze_08182 Corylus avellana HOM05D007893 ORTHO05D010042 4.1e-09 66.2 53 56.6
Psat2g137760 Pisum sativum HOM05D007893 ORTHO05D010042 4.1e-09 66.2 58 55.2
SGA_v2.0_scaffold4G01973 Striga asiatica HOM05D008392 ORTHO05D010441 4.1e-09 66.2 44 72.7
Nitab4.5_0002310g0060 Nicotiana tabacum HOM05D007893 ORTHO05D010042 5.4e-09 65.9 64 50.0
SalBow6G6080 Salvia bowleyana HOM05D007893 ORTHO05D010042 5.4e-09 65.9 55 56.4
TWI60G0064 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 7.0e-09 65.5 88 38.6
Gorai.004G065800 Gossypium raimondii HOM05D007893 ORTHO05D010042 9.1e-09 65.1 67 47.8
Sed0014013 Sechium edule HOM05D007893 ORTHO05D010042 1.2e-08 64.7 56 51.8
Gohir.D08G063700 Gossypium hirsutum HOM05D007893 ORTHO05D010042 1.6e-08 64.3 63 52.4
ClCG10G008950 Citrullus lanatus HOM05D007893 ORTHO05D010042 2.0e-08 63.9 55 49.1
Potri.001G139300 Populus trichocarpa HOM05D007893 ORTHO05D010042 2.7e-08 63.5 61 50.8
Lj3g0001800 Lotus japonicus HOM05D007893 ORTHO05D010042 3.5e-08 63.2 58 53.4
Lj3g0011187 Lotus japonicus HOM05D007893 ORTHO05D010042 3.5e-08 63.2 58 53.4
Ca_08153_v3 Cicer arietinum L. HOM05D007893 ORTHO05D010042 4.5e-08 62.8 48 62.5
DCAR_012172 Daucus carota HOM05D007893 ORTHO05D010042 4.5e-08 62.8 63 46.0
Sabra01G0108300 Salix brachista HOM05D007893 ORTHO05D010042 5.9e-08 62.4 61 50.8
MD14G1081200 Malus domestica HOM05D007893 ORTHO05D010042 7.7e-08 62.0 62 48.4
Eucgr.E00255 Eucalyptus grandis HOM05D007893 ORTHO05D010042 1.0e-07 61.6 56 44.6
Cpa.g.sc159.24 Carica papaya HOM05D007893 ORTHO05D010042 1.7e-07 60.8 55 49.1
Lj7A473T51 Lonicera japonica HOM05D007893 ORTHO05D010042 2.2e-07 60.5 57 54.4
PGSC0003DMG400002555 Solanum tuberosum HOM05D007893 ORTHO05D010042 2.2e-07 60.5 66 40.9
RcHm_v2.0_Chr3g0484571 Rosa chinensis HOM05D007893 ORTHO05D010042 2.9e-07 60.1 70 45.7
TAR374G1349 Trochodendron aralioides HOM05D007893 ORTHO05D010042 5.0e-07 59.3 53 52.8
PGR042G3148 Punica granatum HOM05D007893 ORTHO05D010042 8.5e-07 58.5 48 56.2
ATR0680G090 Amborella trichopoda HOM05D007893 ORTHO05D010042 1.5e-06 57.8 53 43.4
Nn7g37761 Nelumbo nucifera HOM05D007893 ORTHO05D010042 3.2e-06 56.6 61 42.6
TPR.G6545 Trifolium pratense HOM05D007893 ORTHO05D010042 4.2e-06 56.2 53 56.6
Sopen00g012250 Solanum pennellii HOM05D007893 ORTHO05D010042 5.5e-06 55.8 66 40.9
TPR.G8086 Trifolium pratense HOM05D007893 ORTHO05D010042 5.5e-06 55.8 58 48.3
TWI75G0531 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 9.4e-06 55.1 57 45.6
TWI75G0860 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 9.4e-06 55.1 57 45.6
TWI75G0965 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 9.4e-06 55.1 57 45.6
TWI75G1402 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 9.4e-06 55.1 57 45.6
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 9.4e-06 55.1 57 45.6


User provided reference genes

Program Settings