Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 9.7e-267 922.9 470 100.0
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-129 466.8 299 80.6
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-112 409.1 284 76.4
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 1.8e-50 204.5 263 42.6
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-47 193.0 358 33.8
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-46 191.8 356 34.0
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-46 191.4 265 37.0
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-46 191.4 372 32.0
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-45 187.2 237 41.4
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-45 186.4 278 36.3
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-45 186.0 350 32.9
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-44 183.7 209 45.0
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 9.3e-44 182.2 209 43.5
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 3.5e-43 180.3 249 39.0
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-43 180.3 337 35.0
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 1.9e-41 174.5 317 30.6
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-40 170.2 329 31.6
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 8.2e-40 169.1 265 35.8
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-38 164.5 271 34.3
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-37 159.8 341 31.1
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 4.8e-32 143.3 253 32.0
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 4.1e-31 140.2 353 28.6
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 6.9e-31 139.4 273 38.8
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-29 135.2 225 34.2
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-28 131.0 173 38.7
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-24 117.5 120 45.0
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 6.3e-24 116.3 107 47.7
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 4.1e-23 113.6 243 25.9
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-22 110.9 280 27.9
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-22 110.9 119 42.0
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-22 110.5 289 28.4
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-22 110.5 268 29.9
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 7.7e-22 109.4 161 34.2
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-21 109.0 126 39.7
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-21 107.1 201 29.4
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 8.5e-21 105.9 201 29.4
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 1.1e-20 105.5 150 34.0
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 1.5e-20 105.1 278 26.3
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 1.5e-20 105.1 278 26.3
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 1.9e-20 104.8 278 26.3
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 6.1e-19 99.8 199 33.7
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 8.0e-19 99.4 199 33.7
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.4e-18 98.6 243 25.5
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 1.4e-18 98.6 244 26.6
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-18 98.2 219 29.7
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-18 97.8 191 31.9
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-18 96.7 289 26.3
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-18 96.3 209 28.2
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 6.7e-18 96.3 199 33.2
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-17 94.7 191 30.9
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 4.4e-17 93.6 224 27.2
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 5.7e-17 93.2 225 28.9
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-17 93.2 204 31.9
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-17 93.2 179 31.3
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 9.7e-17 92.4 204 31.4
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 1.3e-16 92.0 175 28.0
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-16 92.0 204 31.4
Cc09_g07530 Coffea canephora HOM05D006612 ORTHO05D009014 3.7e-16 90.5 133 32.3
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-16 90.5 123 36.6
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-15 89.0 241 29.5
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 9.1e-15 85.9 211 26.5
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 9.1e-15 85.9 204 28.9
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 9.1e-15 85.9 214 30.4
Cc07_g03400 Coffea canephora HOM05D006612 ORTHO05D009014 1.6e-14 85.1 260 26.5
Cc10_g00450 Coffea canephora HOM05D004506 ORTHO05D005894 2.0e-14 84.7 326 23.9
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-14 84.7 126 34.9
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-14 84.7 126 34.9
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 2.9e-13 80.9 250 24.8
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.9e-13 80.9 220 26.8
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 3.8e-13 80.5 219 25.6
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 6.5e-13 79.7 290 23.4
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 6.5e-13 79.7 226 28.3
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-12 79.0 214 25.2
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 2.5e-12 77.8 128 32.8
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 7.2e-12 76.3 203 25.6
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 7.2e-12 76.3 96 39.6
SGA_v2.0_scaffold13G06611 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-11 75.5 183 27.9
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 1.6e-11 75.1 80 41.2
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 2.7e-11 74.3 203 25.6
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-11 74.3 165 29.1
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-11 73.9 220 26.8
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 6.1e-11 73.2 205 22.4
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 6.1e-11 73.2 266 22.2
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 8.0e-11 72.8 221 25.8
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 1.4e-10 72.0 244 23.8
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 1.4e-10 72.0 238 27.3
CANSAT35G0072 Cannabis sativa HOM05D006612 ORTHO05D010384 1.8e-10 71.6 252 22.6
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 2.3e-10 71.2 137 31.4
SGA_v2.0_scaffold116G32264 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-10 70.5 105 38.1
SGA_v2.0_scaffold13G06612 Striga asiatica HOM05D006612 ORTHO05D009014 8.8e-10 69.3 69 47.8
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-09 68.9 215 22.8
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-09 68.6 88 42.0
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-09 68.6 99 34.3
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.0e-09 68.2 220 25.0
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 4.4e-09 67.0 111 30.6
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.4e-09 67.0 220 25.5
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.7e-09 66.6 83 36.1
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 9.8e-09 65.9 185 22.7
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 1.3e-08 65.5 220 24.5
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-08 65.1 229 23.6
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-08 65.1 85 34.1
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 2.2e-08 64.7 196 24.0
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 2.2e-08 64.7 361 23.3
Aqoxy3G03684 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 2.8e-08 64.3 241 25.3
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-08 64.3 64 35.9
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.7e-08 63.9 209 24.4
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 3.7e-08 63.9 205 25.9
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 3.7e-08 63.9 177 29.4
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.3e-08 63.2 219 22.8
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 8.3e-08 62.8 120 32.5
SGA_v2.0_scaffold46G17409 Striga asiatica HOM05D021043 ORTHO05D399715 1.1e-07 62.4 191 30.4
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.8e-07 61.6 219 23.7
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.8e-07 61.6 219 22.8
Oeu030932.1 Olea europaea HOM05D019936 ORTHO05D010619 3.1e-07 60.8 105 30.5
Potri.018G065300 Populus trichocarpa HOM05D000824 ORTHO05D002221 3.1e-07 60.8 220 26.4
CANSAT01G2441 Cannabis sativa HOM05D009267 ORTHO05D010384 4.1e-07 60.5 243 23.0
CANSAT25G2360 Cannabis sativa HOM05D009267 ORTHO05D010384 4.1e-07 60.5 248 25.0
CANSAT80G1945 Cannabis sativa HOM05D006612 ORTHO05D010384 4.1e-07 60.5 92 30.4
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.1e-07 60.5 219 22.4
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-07 60.1 68 41.2
Atru.chr11.411 Acer truncatum HOM05D006612 ORTHO05D010384 1.2e-06 58.9 85 28.2
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-06 58.5 98 35.7
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 2.0e-06 58.2 96 31.2
Sed0022878 Sechium edule HOM05D000824 ORTHO05D003555 2.0e-06 58.2 246 24.4
SGA_v2.0_scaffold24G10399 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-06 57.4 124 28.2
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.5e-06 57.0 99 29.3
SGA_v2.0_scaffold68G23014 Striga asiatica HOM05D000096 ORTHO05D000045 5.9e-06 56.6 106 36.8


User provided reference genes

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