Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold141G35537 Striga asiatica HOM05D002635 ORTHO05D002756 0.0e+00 1112.8 599 100.0
Migut.F01000 Erythranthe guttata HOM05D002635 ORTHO05D002756 1.0e-31 142.5 170 50.6
Oeu037030.1 Olea europaea HOM05D002635 ORTHO05D002756 1.8e-28 131.7 170 48.2
MSTRG.38 Avicennia marina HOM05D002635 ORTHO05D002756 5.4e-28 130.2 170 45.9
Migut.F00164 Erythranthe guttata HOM05D002635 ORTHO05D002756 1.6e-27 128.6 171 47.4
Oeu061018.1 Olea europaea HOM05D002635 ORTHO05D002756 7.7e-27 126.3 170 46.5
SGA_v2.0_scaffold120G32906 Striga asiatica HOM05D030133 ORTHO05D002756 1.8e-23 115.2 180 43.3
MSTRG.26992 Avicennia marina HOM05D002635 ORTHO05D002756 2.2e-21 108.2 168 41.1
SalBow4G0860 Salvia bowleyana HOM05D002635 ORTHO05D002756 3.2e-20 104.4 169 37.9
unitig_37.g11991 Utricularia gibba HOM05D002635 ORTHO05D002756 9.2e-20 102.8 172 36.0
Solyc06g053230.4 Solanum lycopersicum HOM05D002635 ORTHO05D002756 1.2e-19 102.4 170 38.8
Sopen06g018300 Solanum pennellii HOM05D002635 ORTHO05D002756 1.2e-19 102.4 170 38.8
Peaxi162Scf00618g00019 Petunia axillaris HOM05D002635 ORTHO05D002756 1.6e-19 102.1 170 38.2
Nn1g00396 Nelumbo nucifera HOM05D002635 ORTHO05D002756 2.7e-19 101.3 187 36.4
Nitab4.5_0001865g0020 Nicotiana tabacum HOM05D002635 ORTHO05D002756 1.0e-18 99.4 120 48.3
TPR.G33648 Trifolium pratense HOM05D002635 ORTHO05D002756 1.0e-18 99.4 167 37.7
PGSC0003DMG400003229 Solanum tuberosum HOM05D002635 ORTHO05D002756 1.3e-18 99.0 169 34.9
PGSC0003DMG400030232 Solanum tuberosum HOM05D002635 ORTHO05D002756 1.3e-18 99.0 170 38.2
Lj1P1026T15 Lonicera japonica HOM05D002635 ORTHO05D002756 5.0e-18 97.1 147 39.5
Rhsim03G0213500 Rhododendron simsii HOM05D002635 ORTHO05D002756 5.0e-18 97.1 167 38.3
Sopen03g022290 Solanum pennellii HOM05D002635 ORTHO05D002756 8.6e-18 96.3 169 34.3
CiPaw.05G202500 Carya illinoinensis HOM05D002635 ORTHO05D002756 1.5e-17 95.5 171 37.4
Ca_16753_v3 Cicer arietinum L. HOM05D002635 ORTHO05D002756 1.5e-17 95.5 166 37.3
Psat5g073760 Pisum sativum HOM05D002635 ORTHO05D002756 1.9e-17 95.1 167 36.5
Medtr3g092200 Medicago truncatula HOM05D002635 ORTHO05D002756 3.3e-17 94.4 166 36.7
TWI14G1040 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 7.3e-17 93.2 171 37.4
Lj1g0010184 Lotus japonicus HOM05D002635 ORTHO05D002756 9.5e-17 92.8 167 37.1
Lalb_Chr23g0271821 Lupinus albus HOM05D002635 ORTHO05D002756 1.2e-16 92.4 194 32.5
CAN.G1527.11 Capsicum annuum HOM05D002635 ORTHO05D002756 1.6e-16 92.0 170 35.3
Lalb_Chr08g0239831 Lupinus albus HOM05D002635 ORTHO05D002756 1.6e-16 92.0 193 34.2
Phvul.009G049800 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 3.6e-16 90.9 167 37.7
QL09p007458 Quercus lobata HOM05D002635 ORTHO05D002756 4.7e-16 90.5 170 35.9
PGR142G4371 Punica granatum HOM05D002635 ORTHO05D002756 6.2e-16 90.1 170 34.1
VMungo1309G2217 Vigna mungo HOM05D002635 ORTHO05D002756 1.0e-15 89.4 167 37.1
Glyma.04G231300 Glycine max HOM05D002635 ORTHO05D002756 2.3e-15 88.2 184 36.4
Glyma.06G133900 Glycine max HOM05D002635 ORTHO05D002756 4.0e-15 87.4 186 36.0
Dinv35371 Davidia involucrata HOM05D002635 ORTHO05D002756 5.2e-15 87.0 170 35.3
Potri.012G023500 Populus trichocarpa HOM05D002635 ORTHO05D002756 6.8e-15 86.7 168 33.3
Atru.chr12.2359 Acer truncatum HOM05D002635 ORTHO05D002756 2.0e-14 85.1 171 33.9
Aqoxy7G00018 Aquilegia oxysepala HOM05D002635 ORTHO05D002756 2.6e-14 84.7 106 49.1
CANSAT21G1331 Cannabis sativa HOM05D002635 ORTHO05D002756 2.6e-14 84.7 183 32.2
RcHm_v2.0_Chr1g0382461 Rosa chinensis HOM05D002635 ORTHO05D002756 3.4e-14 84.3 177 33.3
vmacro06424 Vaccinium macrocarpon HOM05D002635 ORTHO05D002756 3.4e-14 84.3 170 35.3
Dinv29229 Davidia involucrata HOM05D002635 ORTHO05D002756 5.8e-14 83.6 108 44.4
Duzib068G1338 Durio zibethinus HOM05D002635 ORTHO05D002756 5.8e-14 83.6 171 35.7
Manes.01G039000 Manihot esculenta HOM05D002635 ORTHO05D002756 5.8e-14 83.6 177 34.5
COL.COLO4_14346 Corchorus olitorius HOM05D002635 ORTHO05D002756 2.2e-13 81.6 171 35.1
Actinidia08684 Actinidia chinensis HOM05D002635 ORTHO05D002756 6.4e-13 80.1 170 31.8
Cpa.g.sc3.141 Carica papaya HOM05D002635 ORTHO05D002756 6.4e-13 80.1 146 37.0
Ciclev10021220m.g Citrus clementina HOM05D002635 ORTHO05D002756 6.4e-13 80.1 170 32.4
Gohir.A08G097800 Gossypium hirsutum HOM05D002635 ORTHO05D002756 8.3e-13 79.7 171 32.2
Cfa016178 Carpinus fangiana HOM05D002635 ORTHO05D002756 1.1e-12 79.3 106 43.4
PSO063G4320 Papaver somniferum HOM05D002635 ORTHO05D002756 1.1e-12 79.3 172 33.1
Prupe.2G316900 Prunus persica HOM05D002635 ORTHO05D002756 1.9e-12 78.6 173 31.8
Lsat_1_v5_gn_8_4621 Lactuca sativa HOM05D002635 ORTHO05D002756 3.2e-12 77.8 164 34.1
Duzib084G0218 Durio zibethinus HOM05D002635 ORTHO05D002756 4.1e-12 77.4 170 34.1
Lj3P898T29 Lonicera japonica HOM05D002635 ORTHO05D002756 4.1e-12 77.4 108 41.7
PSO782G2007 Papaver somniferum HOM05D002635 ORTHO05D002756 5.4e-12 77.0 175 32.6
Nn3g18827 Nelumbo nucifera HOM05D002635 ORTHO05D002756 7.0e-12 76.6 108 41.7
MD01G1227000 Malus domestica HOM05D002635 ORTHO05D002756 9.2e-12 76.3 173 31.2
TAR362G0126 Trochodendron aralioides HOM05D002635 ORTHO05D002756 1.2e-11 75.9 106 40.6
Gohir.D08G114700 Gossypium hirsutum HOM05D002635 ORTHO05D002756 2.0e-11 75.1 171 30.4
Gorai.004G123600 Gossypium raimondii HOM05D002635 ORTHO05D002756 2.0e-11 75.1 171 30.4
Thecc.03G206200 Theobroma cacao HOM05D002635 ORTHO05D002756 3.5e-11 74.3 167 31.7
Manes.05G193600 Manihot esculenta HOM05D002635 ORTHO05D002756 4.6e-11 73.9 176 32.4
Sed0007409 Sechium edule HOM05D002635 ORTHO05D002756 4.6e-11 73.9 118 38.1
THA.LOC104813274 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 4.6e-11 73.9 195 31.8
FvH4_7g32590 Fragaria vesca HOM05D002635 ORTHO05D002756 6.0e-11 73.6 172 32.0
FAN03G2192 Fragaria x ananassa HOM05D002635 ORTHO05D002756 2.3e-10 71.6 172 31.4
MD07G1297300 Malus domestica HOM05D002635 ORTHO05D002756 2.3e-10 71.6 173 30.1
HPP92_000459 Vanilla planifolia HOM05D002635 ORTHO05D002756 2.3e-10 71.6 118 39.0
Duzib205G1289 Durio zibethinus HOM05D002635 ORTHO05D002756 3.0e-10 71.2 182 30.8
Peaxi162Scf00740g00054 Petunia axillaris HOM05D002635 ORTHO05D002756 3.0e-10 71.2 107 38.3
MELO3C016080.2 Cucumis melo HOM05D002635 ORTHO05D002756 8.6e-10 69.7 118 36.4
FAN10G2062 Fragaria x ananassa HOM05D002635 ORTHO05D002756 8.6e-10 69.7 172 30.8
CsaV3_4G008490 Cucumis sativus L. HOM05D002635 ORTHO05D002756 1.1e-09 69.3 118 36.4
FAN10G0171 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.5e-09 68.9 172 30.8
ClCG07G009840 Citrullus lanatus HOM05D002635 ORTHO05D002756 2.5e-09 68.2 170 30.6
Nitab4.5_0007028g0010 Nicotiana tabacum HOM05D002635 ORTHO05D002756 2.5e-09 68.2 105 39.0
SEGI_28987 Sequoiadendron giganteum HOM05D002635 ORTHO05D002756 3.3e-09 67.8 114 36.0
ATR0620G159 Amborella trichopoda HOM05D002635 ORTHO05D002756 3.6e-08 64.3 143 30.8
SMO266G0089 Selaginella moellendorffii HOM05D002635 ORTHO05D002756 2.3e-07 61.6 107 36.4
Glyma.08G299100 Glycine max HOM05D000001 ORTHO05D002756 4.0e-07 60.8 61 49.2
Pp3c2_5540 Physcomitrium patens HOM05D002635 ORTHO05D002756 6.8e-07 60.1 111 35.1
TAR381G0357 Trochodendron aralioides HOM05D002635 ORTHO05D002756 6.8e-07 60.1 122 32.8
FAN01G2103 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.2e-06 59.3 131 32.8
Pp3c1_36080 Physcomitrium patens HOM05D002635 ORTHO05D002756 1.5e-06 58.9 111 35.1
Rhsim05G0116700 Rhododendron simsii HOM05D002635 ORTHO05D002756 2.0e-06 58.5 135 30.4
Mapoly0003s0203 Marchantia polymorpha HOM05D002635 ORTHO05D002756 2.6e-06 58.2 113 33.6
Oeu010215.1 Olea europaea HOM05D002635 ORTHO05D002756 2.6e-06 58.2 153 28.1
TAR624G0320 Trochodendron aralioides HOM05D002635 ORTHO05D002756 4.4e-06 57.4 114 34.2
Migut.N00855 Erythranthe guttata HOM05D002635 ORTHO05D002756 5.8e-06 57.0 158 29.1
THA.LOC104816831 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 5.8e-06 57.0 113 32.7
PGR142G3898 Punica granatum HOM05D002635 ORTHO05D002756 7.5e-06 56.6 140 29.3
MSTRG.27874 Avicennia marina HOM05D002635 ORTHO05D002756 9.8e-06 56.2 149 30.2
Ciclev10001394m.g Citrus clementina HOM05D002635 ORTHO05D002756 9.8e-06 56.2 126 31.7
Duzib052G0871 Durio zibethinus HOM05D002635 ORTHO05D002756 9.8e-06 56.2 118 32.2
SHI04877 Sapria himalayana HOM05D002635 ORTHO05D002756 9.8e-06 56.2 120 30.8


User provided reference genes

Program Settings