Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 2.1e-112 409.1 208 100.0
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 2.4e-60 236.1 165 78.2
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 8.6e-58 227.6 152 78.9
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 2.1e-56 223.0 159 74.2
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 4.4e-54 215.3 162 66.7
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 5.8e-54 214.9 162 66.0
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 2.9e-53 212.6 138 76.8
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 6.4e-53 211.5 155 67.7
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 8.3e-53 211.1 156 69.2
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.4e-52 210.3 137 75.9
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.9e-52 209.9 154 68.8
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.9e-52 209.9 154 68.8
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 2.4e-52 209.5 155 71.6
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.4e-52 208.4 154 68.2
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 7.0e-52 208.0 158 67.7
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.0e-52 208.0 154 68.2
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 9.2e-52 207.6 154 72.1
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 1.2e-51 207.2 156 71.2
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 4.6e-51 205.3 155 68.4
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 6.0e-51 204.9 179 64.2
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 1.3e-50 203.8 155 66.5
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 1.7e-50 203.4 141 73.8
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 1.7e-50 203.4 155 67.7
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.7e-50 203.4 155 67.7
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.7e-50 203.4 154 67.5
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.0e-50 202.6 155 67.1
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 3.9e-50 202.2 205 56.1
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 6.6e-50 201.4 166 63.9
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 8.6e-50 201.1 155 67.1
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 8.6e-50 201.1 149 67.8
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 1.1e-49 200.7 158 65.8
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 3.3e-49 199.1 154 68.2
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 4.3e-49 198.7 188 58.0
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 4.3e-49 198.7 115 80.9
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 5.6e-49 198.4 163 64.4
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 5.6e-49 198.4 183 59.0
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 7.3e-49 198.0 124 77.4
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 9.5e-49 197.6 148 67.6
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 9.5e-49 197.6 156 64.1
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 1.2e-48 197.2 145 71.0
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.6e-48 196.8 145 69.0
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 2.1e-48 196.4 151 68.2
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 2.8e-48 196.1 154 66.9
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 2.8e-48 196.1 151 67.5
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 3.6e-48 195.7 141 70.2
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 4.7e-48 195.3 145 68.3
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 6.2e-48 194.9 124 76.6
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 8.0e-48 194.5 156 66.7
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 8.0e-48 194.5 124 77.4
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 1.8e-47 193.4 133 75.2
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 2.3e-47 193.0 145 67.6
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 2.3e-47 193.0 186 57.5
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 2.3e-47 193.0 125 76.0
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 3.1e-47 192.6 173 59.5
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 3.1e-47 192.6 175 59.4
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 3.1e-47 192.6 133 71.4
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 4.0e-47 192.2 125 75.2
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 5.2e-47 191.8 153 66.7
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 2.0e-46 189.9 171 59.6
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 3.4e-46 189.1 187 55.6
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 9.8e-46 187.6 146 65.1
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 2.2e-45 186.4 147 63.3
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 8.3e-45 184.5 156 63.5
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.4e-44 183.7 156 62.8
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 2.4e-44 183.0 148 66.2
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 9.2e-44 181.0 156 60.9
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.2e-43 180.6 118 74.6
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 2.1e-43 179.9 118 74.6
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 3.9e-42 175.6 120 71.7
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.5e-41 173.7 115 73.9
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 2.5e-41 172.9 145 61.4
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 4.3e-41 172.2 156 58.3
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 5.2e-39 165.2 108 73.1
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 2.9e-37 159.5 120 67.5
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.1e-36 157.5 142 61.3
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 1.4e-36 157.1 128 64.1
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 1.9e-36 156.8 116 69.8
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 7.1e-36 154.8 155 52.9
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 7.1e-36 154.8 128 61.7
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 9.2e-36 154.5 92 81.5
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 3.0e-34 149.4 96 79.2
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 3.9e-34 149.1 99 71.7
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 6.6e-34 148.3 122 60.7
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 9.5e-33 144.4 158 53.2
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 1.4e-31 140.6 130 54.6
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 4.0e-31 139.0 84 79.8
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.8e-30 135.2 83 80.7
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 9.9e-30 134.4 124 59.7
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 1.1e-28 131.0 104 63.5
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 1.9e-28 130.2 71 88.7
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.4e-28 129.8 155 50.3
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.4e-28 129.8 113 62.8
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 6.0e-27 125.2 101 65.3
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 9.6e-25 117.9 100 65.0
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.6e-24 117.1 83 69.9
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.7e-24 115.5 154 45.5
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 3.1e-23 112.8 80 71.2
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 1.6e-19 100.5 92 58.7
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.7e-18 97.1 155 41.9
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 1.6e-16 90.5 51 88.2
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 4.5e-14 82.4 128 43.0
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 4.5e-14 82.4 124 41.9
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 4.5e-14 82.4 70 61.4
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 5.8e-14 82.0 64 62.5
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 4.6e-11 72.4 91 51.6
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 4.6e-11 72.4 121 40.5
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 4.0e-07 59.3 159 27.0
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 6.9e-07 58.5 96 45.8
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 1.2e-06 57.8 112 28.6
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 2.6e-06 56.6 118 30.5
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 3.4e-06 56.2 126 27.8
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 4.5e-06 55.8 143 24.5
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 7.6e-06 55.1 119 28.6
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 9.9e-06 54.7 134 27.6


User provided reference genes

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