Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold140G35466 Striga asiatica HOM05D000579 ORTHO05D403340 4.2e-53 211.1 104 100.0
SGA_v2.0_scaffold54G19508 Striga asiatica HOM05D000579 ORTHO05D000741 5.1e-11 71.2 66 57.6
MSTRG.23351 Avicennia marina HOM05D000579 ORTHO05D000741 9.7e-10 67.0 66 53.0
SalBow3G4571 Salvia bowleyana HOM05D000579 ORTHO05D000741 2.8e-09 65.5 82 42.7
Dinv13203 Davidia involucrata HOM05D000579 ORTHO05D000741 4.8e-09 64.7 66 50.0
Hma1.2p1_0047F.1_g027750 Hydrangea macrophylla HOM05D000579 ORTHO05D000741 1.4e-08 63.2 66 50.0
Oeu002412.1 Olea europaea HOM05D000579 ORTHO05D000741 1.4e-08 63.2 66 53.0
Duzib147G0830 Durio zibethinus HOM05D000579 ORTHO05D000741 3.1e-08 62.0 66 47.0
Cc07_g14980 Coffea canephora HOM05D000579 ORTHO05D000741 4.1e-08 61.6 64 48.4
Manes.13G094500 Manihot esculenta HOM05D000579 ORTHO05D000741 9.1e-08 60.5 66 50.0
Atru.chr6.1156 Acer truncatum HOM05D000579 ORTHO05D000741 1.2e-07 60.1 72 50.0
Dinv08837 Davidia involucrata HOM05D000579 ORTHO05D000741 1.2e-07 60.1 66 47.0
CAN.G1177.1 Capsicum annuum HOM05D000579 ORTHO05D000741 1.5e-07 59.7 66 45.5
COL.COLO4_27269 Corchorus olitorius HOM05D000579 ORTHO05D000741 2.0e-07 59.3 66 42.4
Dinv09028 Davidia involucrata HOM05D000579 ORTHO05D000741 2.0e-07 59.3 66 51.5
Migut.H02349 Erythranthe guttata HOM05D000579 ORTHO05D000741 2.6e-07 58.9 83 38.6
DCAR_011671 Daucus carota HOM05D000579 ORTHO05D000741 3.4e-07 58.5 72 45.8
Nn1g05378 Nelumbo nucifera HOM05D000579 ORTHO05D000741 4.5e-07 58.2 66 51.5
Thecc.01G099100 Theobroma cacao HOM05D000579 ORTHO05D000741 4.5e-07 58.2 66 45.5
Manes.10G105700 Manihot esculenta HOM05D000579 ORTHO05D000741 5.9e-07 57.8 66 45.5
Lj4A896T34 Lonicera japonica HOM05D000579 ORTHO05D000741 1.7e-06 56.2 84 38.1
Peaxi162Scf00212g00214 Petunia axillaris HOM05D000579 ORTHO05D000741 1.7e-06 56.2 66 45.5
Manes.01G100600 Manihot esculenta HOM05D000579 ORTHO05D000741 2.2e-06 55.8 68 45.6
CSS0028654 Camellia sinensis var. sinensis HOM05D000579 ORTHO05D000741 2.9e-06 55.5 66 48.5
Cpa.g.sc42.42 Carica papaya HOM05D000579 ORTHO05D000741 2.9e-06 55.5 66 45.5
Sc03g0002000 Simmondsia chinensis HOM05D000579 ORTHO05D000741 5.0e-06 54.7 66 47.0
Sopen11g004780 Solanum pennellii HOM05D000579 ORTHO05D000741 5.0e-06 54.7 66 43.9
Duzib264G0978 Durio zibethinus HOM05D000579 ORTHO05D000741 6.5e-06 54.3 66 42.4
Eucgr.H04767 Eucalyptus grandis HOM05D000579 ORTHO05D000741 8.5e-06 53.9 66 42.4
Gohir.D12G086300 Gossypium hirsutum HOM05D000579 ORTHO05D000741 8.5e-06 53.9 64 42.2
Gorai.008G096600 Gossypium raimondii HOM05D000579 ORTHO05D000741 8.5e-06 53.9 64 42.2
Nitab4.5_0000743g0200 Nicotiana tabacum HOM05D000579 ORTHO05D000741 8.5e-06 53.9 65 40.0
Potri.001G313100 Populus trichocarpa HOM05D000579 ORTHO05D000741 8.5e-06 53.9 66 47.0
Potri.007G094700 Populus trichocarpa HOM05D000579 ORTHO05D000741 8.5e-06 53.9 68 39.7
Prupe.6G189600 Prunus persica HOM05D000579 ORTHO05D000741 8.5e-06 53.9 66 42.4
Solyc11g009000.2 Solanum lycopersicum HOM05D000579 ORTHO05D000741 8.5e-06 53.9 76 38.2


User provided reference genes

Program Settings