Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06774 Striga asiatica HOM05D024400 ORTHO05D004107 2.9e-108 395.2 191 100.0
SGA_v2.0_scaffold130G34201 Striga asiatica HOM05D024400 ORTHO05D004107 3.3e-16 89.4 91 52.7
SGA_v2.0_scaffold1G00311 Striga asiatica HOM05D028422 ORTHO05D004107 5.3e-14 82.0 142 34.5
SGA_v2.0_scaffold335G49138 Striga asiatica HOM05D028422 ORTHO05D004107 4.5e-13 79.0 112 33.0
SGA_v2.0_scaffold29G12075 Striga asiatica HOM05D028422 ORTHO05D004107 7.7e-13 78.2 103 34.0
FvH4_5g30881 Fragaria vesca HOM05D009570 ORTHO05D009451 1.2e-08 64.3 97 38.1
FAN24G3217 Fragaria x ananassa HOM05D009570 ORTHO05D009451 2.0e-08 63.5 97 38.1
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 2.6e-08 63.2 103 29.1
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-07 60.8 98 31.6
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-07 60.8 98 31.6
SGA_v2.0_scaffold6G03405 Striga asiatica HOM05D024400 ORTHO05D004107 4.8e-07 58.9 72 50.0
HanXRQChr08g0224731 Helianthus annuus HOM05D008850 ORTHO05D004107 6.3e-07 58.5 103 31.1
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 8.3e-07 58.2 139 24.5
FAN05G0222 Fragaria x ananassa HOM05D009570 ORTHO05D009451 1.1e-06 57.8 183 27.3
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 1.8e-06 57.0 99 28.3
FvH4_5g20181 Fragaria vesca HOM05D000017 ORTHO05D009451 5.4e-06 55.5 84 35.7
FvH4_7g09970 Fragaria vesca HOM05D000053 ORTHO05D009451 5.4e-06 55.5 81 35.8
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 9.1e-06 54.7 133 24.1
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.1e-06 54.7 66 34.8


User provided reference genes

Program Settings