Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06759 Striga asiatica HOM05D005858 ORTHO05D006982 1.5e-62 242.7 120 100.0
SGA_v2.0_scaffold66G22516 Striga asiatica HOM05D005858 ORTHO05D006982 3.7e-21 105.1 94 60.6
Migut.J01417 Erythranthe guttata HOM05D005858 ORTHO05D006982 1.0e-15 87.0 92 47.8
Atru.chr7.494 Acer truncatum HOM05D005858 ORTHO05D006982 5.2e-15 84.7 94 46.8
Phvul.003G151200 Phaseolus vulgaris HOM05D005858 ORTHO05D006982 6.8e-15 84.3 92 46.7
Oeu035673.1 Olea europaea HOM05D005858 ORTHO05D006982 8.8e-15 84.0 94 46.8
VMungo1215G2346 Vigna mungo HOM05D005858 ORTHO05D006982 8.8e-15 84.0 92 47.8
FAN07G0488 Fragaria x ananassa HOM05D005858 ORTHO05D006982 1.2e-14 83.6 92 48.9
FAN17G1719 Fragaria x ananassa HOM05D005858 ORTHO05D006982 2.6e-14 82.4 92 48.9
Glyma.13G091600 Glycine max HOM05D005858 ORTHO05D006982 3.4e-14 82.0 92 45.7
QL02p095637 Quercus lobata HOM05D005858 ORTHO05D006982 3.4e-14 82.0 92 45.7
Dinv41306 Davidia involucrata HOM05D005858 ORTHO05D006982 9.8e-14 80.5 99 44.4
FvH4_4g09670 Fragaria vesca HOM05D005858 ORTHO05D006982 9.8e-14 80.5 92 47.8
FAN12G2717 Fragaria x ananassa HOM05D005858 ORTHO05D006982 9.8e-14 80.5 92 47.8
FAN22G1041 Fragaria x ananassa HOM05D005858 ORTHO05D006982 9.8e-14 80.5 92 47.8
SalBow6G6404 Salvia bowleyana HOM05D005858 ORTHO05D006982 1.3e-13 80.1 91 46.2
TWI32G1032 Tripterygium wilfordii HOM05D005858 ORTHO05D006982 1.3e-13 80.1 93 46.2
Duzib187G2004 Durio zibethinus HOM05D005858 ORTHO05D006982 2.8e-13 79.0 92 46.7
Potri.018G099000 Populus trichocarpa HOM05D005858 ORTHO05D006982 2.8e-13 79.0 93 46.2
PGSC0003DMG400011172 Solanum tuberosum HOM05D005858 ORTHO05D006982 3.7e-13 78.6 91 44.0
Peaxi162Scf00525g00820 Petunia axillaris HOM05D005858 ORTHO05D006982 4.8e-13 78.2 90 43.3
Actinidia20954 Actinidia chinensis HOM05D005858 ORTHO05D006982 6.3e-13 77.8 99 43.4
CAN.G1870.1 Capsicum annuum HOM05D005858 ORTHO05D006982 6.3e-13 77.8 91 44.0
Glyma.17G068700 Glycine max HOM05D005858 ORTHO05D006982 6.3e-13 77.8 92 43.5
Rhsim01G0012300 Rhododendron simsii HOM05D005858 ORTHO05D006982 6.3e-13 77.8 91 49.5
Duzib168G1554 Durio zibethinus HOM05D005858 ORTHO05D006982 8.3e-13 77.4 92 44.6
Nitab4.5_0005551g0040 Nicotiana tabacum HOM05D005858 ORTHO05D006982 8.3e-13 77.4 96 42.7
Sopen07g002410 Solanum pennellii HOM05D005858 ORTHO05D006982 8.3e-13 77.4 91 42.9
COL.COLO4_04533 Corchorus olitorius HOM05D005858 ORTHO05D006982 1.1e-12 77.0 92 43.5
Gohir.D08G097150 Gossypium hirsutum HOM05D005858 ORTHO05D006982 1.1e-12 77.0 92 43.5
RcHm_v2.0_Chr4g0404961 Rosa chinensis HOM05D005858 ORTHO05D006982 1.1e-12 77.0 92 45.7
Thecc.09G160700 Theobroma cacao HOM05D005858 ORTHO05D006982 1.4e-12 76.6 92 45.7
Nn8g40237 Nelumbo nucifera HOM05D005858 ORTHO05D006982 1.8e-12 76.3 97 44.3
Sabra18G0085500 Salix brachista HOM05D005858 ORTHO05D006982 1.8e-12 76.3 93 45.2
TAR383G0158 Trochodendron aralioides HOM05D005858 ORTHO05D006982 1.8e-12 76.3 93 43.0
Gorai.004G103900 Gossypium raimondii HOM05D005858 ORTHO05D006982 2.4e-12 75.9 92 42.4
Gorai.012G096000 Gossypium raimondii HOM05D005858 ORTHO05D006982 2.4e-12 75.9 92 40.2
Lalb_Chr12g0199051 Lupinus albus HOM05D005858 ORTHO05D006982 2.4e-12 75.9 92 42.4
FAN12G2910 Fragaria x ananassa HOM05D005858 ORTHO05D006982 3.1e-12 75.5 105 41.9
Manes.06G025900 Manihot esculenta HOM05D005858 ORTHO05D006982 3.1e-12 75.5 93 43.0
Nn2g12544 Nelumbo nucifera HOM05D005858 ORTHO05D006982 4.1e-12 75.1 98 40.8
Gohir.A08G096524 Gossypium hirsutum HOM05D005858 ORTHO05D006982 7.0e-12 74.3 92 42.4
GSVIVG01023744001 Vitis vinifera HOM05D005858 ORTHO05D006982 7.0e-12 74.3 98 42.9
Cc06_g14020 Coffea canephora HOM05D005858 ORTHO05D006982 9.1e-12 73.9 93 41.9
Gohir.A05G345842 Gossypium hirsutum HOM05D005858 ORTHO05D006982 9.1e-12 73.9 92 40.2
Gohir.D04G086000 Gossypium hirsutum HOM05D005858 ORTHO05D006982 9.1e-12 73.9 92 40.2
Cfa013549 Carpinus fangiana HOM05D005858 ORTHO05D006982 2.0e-11 72.8 93 40.9
CiPaw.08G040300 Carya illinoinensis HOM05D005858 ORTHO05D006982 2.0e-11 72.8 92 41.3
Lj4g0010700 Lotus japonicus HOM05D005858 ORTHO05D006982 2.0e-11 72.8 92 40.2
Solyc07g006320.4 Solanum lycopersicum HOM05D005858 ORTHO05D006982 2.0e-11 72.8 115 38.3
C02p13870 Brassica napus HOM05D005858 ORTHO05D006982 3.5e-11 72.0 93 43.0
BolC2t07506H Brassica oleracea HOM05D005858 ORTHO05D006982 3.5e-11 72.0 93 43.0
Prupe.1G097500 Prunus persica HOM05D005858 ORTHO05D006982 4.5e-11 71.6 91 45.1
CSS0006326 Camellia sinensis var. sinensis HOM05D005858 ORTHO05D006982 5.9e-11 71.2 81 44.4
Nitab4.5_0005985g0060 Nicotiana tabacum HOM05D005858 ORTHO05D006982 5.9e-11 71.2 96 40.6
GSVIVG01023724001 Vitis vinifera HOM05D005858 ORTHO05D006982 5.9e-11 71.2 96 42.7
Ciclev10008554m.g Citrus clementina HOM05D005858 ORTHO05D006982 7.7e-11 70.9 95 41.1
Actinidia02640 Actinidia chinensis HOM05D005858 ORTHO05D006982 1.0e-10 70.5 93 44.1
A02p08210 Brassica napus HOM05D005858 ORTHO05D006982 1.0e-10 70.5 93 41.9
BraA02t05894Z Brassica rapa HOM05D005858 ORTHO05D006982 1.0e-10 70.5 93 41.9
Medtr4g129510 Medicago truncatula HOM05D005858 ORTHO05D006982 1.0e-10 70.5 92 39.1
AL8G33800 Arabidopsis lyrata HOM05D005858 ORTHO05D006982 1.3e-10 70.1 93 41.9
PGR142G1620 Punica granatum HOM05D005858 ORTHO05D006982 1.3e-10 70.1 97 43.3
Sp6g19450 Schrenkiella parvula HOM05D005858 ORTHO05D006982 1.3e-10 70.1 93 41.9
Aa31LG3G13600 Aethionema arabicum HOM05D005858 ORTHO05D006982 1.7e-10 69.7 93 40.9
BcaB08g36140 Brassica carinata HOM05D005858 ORTHO05D006982 1.7e-10 69.7 93 39.8
BcaC04g19930 Brassica carinata HOM05D005858 ORTHO05D006982 1.7e-10 69.7 93 39.8
BolC9t57817H Brassica oleracea HOM05D005858 ORTHO05D006982 1.7e-10 69.7 93 39.8
CARHR271500 Cardamine hirsuta HOM05D005858 ORTHO05D006982 1.7e-10 69.7 93 40.9
Thhalv10013683m.g Eutrema salsugineum HOM05D005858 ORTHO05D006982 1.7e-10 69.7 93 40.9
AT5G57770 Arabidopsis thaliana HOM05D005858 ORTHO05D006982 2.3e-10 69.3 93 41.9
Sc08g0005620 Simmondsia chinensis HOM05D005858 ORTHO05D006982 2.3e-10 69.3 101 42.6
DCAR_017943 Daucus carota HOM05D005858 ORTHO05D006982 2.9e-10 68.9 93 40.9
Psat0s235g0040 Pisum sativum HOM05D005858 ORTHO05D006982 3.8e-10 68.6 92 39.1
Carub.0008s1828 Capsella rubella HOM05D005858 ORTHO05D006982 8.6e-10 67.4 93 40.9
ClCG06G012900 Citrullus lanatus HOM05D005858 ORTHO05D006982 8.6e-10 67.4 94 42.6
HanXRQChr12g0358041 Helianthus annuus HOM05D005858 ORTHO05D006982 8.6e-10 67.4 96 38.5
Lj9A728G21 Lonicera japonica HOM05D005858 ORTHO05D006982 1.5e-09 66.6 97 41.2
BcaB05g22374 Brassica carinata HOM05D005858 ORTHO05D006982 1.9e-09 66.2 93 39.8
BraA10t43597Z Brassica rapa HOM05D005858 ORTHO05D006982 2.5e-09 65.9 93 38.7
Ca_21182_v3 Cicer arietinum L. HOM05D005858 ORTHO05D006982 2.5e-09 65.9 94 37.2
A10p15140 Brassica napus HOM05D005858 ORTHO05D006982 3.3e-09 65.5 93 38.7
C09p49650 Brassica napus HOM05D005858 ORTHO05D006982 3.3e-09 65.5 93 38.7
MD13G1260700 Malus domestica HOM05D005858 ORTHO05D006982 3.3e-09 65.5 94 40.4
ECA234G1989 Erigeron canadensis HOM05D005858 ORTHO05D006982 4.2e-09 65.1 96 36.5
BcaB08g36142 Brassica carinata HOM05D005858 ORTHO05D006982 7.2e-09 64.3 93 38.7
Lalb_Chr07g0180081 Lupinus albus HOM05D005858 ORTHO05D006982 1.2e-08 63.5 89 39.3
Aqoxy7G03242 Aquilegia oxysepala HOM05D005858 ORTHO05D006982 1.6e-08 63.2 90 40.0
HanXRQChr10g0306461 Helianthus annuus HOM05D005858 ORTHO05D006982 1.6e-08 63.2 96 36.5
TPR.G5337 Trifolium pratense HOM05D005858 ORTHO05D006982 3.6e-08 62.0 93 36.6
PSO782G0888 Papaver somniferum HOM05D005858 ORTHO05D006982 4.7e-08 61.6 97 36.1
Sed0010280 Sechium edule HOM05D005858 ORTHO05D006982 6.1e-08 61.2 97 38.1
Sed0010370 Sechium edule HOM05D005858 ORTHO05D006982 8.0e-08 60.8 97 39.2
EL10Ac8g18869 Beta vulgaris HOM05D005858 ORTHO05D006982 1.0e-07 60.5 97 39.2
Lsat_1_v5_gn_5_87041 Lactuca sativa HOM05D005858 ORTHO05D006982 1.0e-07 60.5 95 34.7
Eucgr.C00211 Eucalyptus grandis HOM05D005858 ORTHO05D006982 1.4e-07 60.1 93 44.1
Ah.09g229510 Amaranthus hybridus HOM05D005858 ORTHO05D006982 1.8e-07 59.7 99 36.4
arahy.Tifrunner.gnm1.ann1.67VYHR Arachis hypogaea HOM05D005858 ORTHO05D006982 1.8e-07 59.7 98 36.7
arahy.Tifrunner.gnm1.ann1.TG9B3Q Arachis hypogaea HOM05D005858 ORTHO05D006982 1.8e-07 59.7 98 36.7
Hund08985 Selenicereus undatus HOM05D005858 ORTHO05D006982 1.8e-07 59.7 96 39.6
Hund08986 Selenicereus undatus HOM05D005858 ORTHO05D006982 1.8e-07 59.7 96 39.6
BcaB05g22372 Brassica carinata HOM05D005858 ORTHO05D006982 3.0e-07 58.9 121 32.2
Hund26407 Selenicereus undatus HOM05D005858 ORTHO05D006982 3.0e-07 58.9 99 39.4
AUR62039752 Chenopodium quinoa HOM05D005858 ORTHO05D006982 4.0e-07 58.5 97 40.2
AUR62028410 Chenopodium quinoa HOM05D005858 ORTHO05D006982 1.5e-06 56.6 97 39.2
Dinv42786 Davidia involucrata HOM05D005858 ORTHO05D006982 2.0e-06 56.2 101 38.6
Dinv43315 Davidia involucrata HOM05D005858 ORTHO05D006982 2.0e-06 56.2 101 38.6
CsaV3_1G029470 Cucumis sativus L. HOM05D005858 ORTHO05D006982 2.6e-06 55.8 94 37.2


User provided reference genes

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