Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 8.6e-202 706.8 369 100.0
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 1.2e-123 447.2 295 75.9
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 1.8e-122 443.4 295 74.6
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 7.2e-116 421.4 296 70.3
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 1.0e-109 401.0 296 65.9
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 9.4e-108 394.4 295 66.8
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 2.1e-107 393.3 295 66.4
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 1.1e-105 387.5 295 66.4
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 1.1e-103 380.9 295 62.7
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 4.1e-103 379.0 294 62.9
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 9.1e-103 377.9 295 63.7
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 9.1e-103 377.9 296 61.8
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 2.0e-102 376.7 296 62.8
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 3.8e-101 372.5 295 61.7
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 6.5e-101 371.7 295 63.7
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 6.5e-101 371.7 293 60.8
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 8.5e-101 371.3 295 61.4
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 8.5e-101 371.3 295 60.7
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.5e-100 370.5 295 61.0
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.5e-100 370.5 295 60.7
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 1.9e-100 370.2 295 60.0
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 1.6e-99 367.1 294 60.9
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 1.6e-99 367.1 295 59.3
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 2.1e-99 366.7 290 63.8
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 3.0e-98 362.8 292 59.2
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 3.0e-98 362.8 295 60.3
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 6.8e-98 361.7 309 58.6
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 1.5e-97 360.5 293 59.0
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 2.0e-97 360.1 293 59.0
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 2.6e-97 359.8 293 59.4
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 2.6e-97 359.8 290 61.0
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 5.7e-97 358.6 295 60.7
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 1.7e-96 357.1 295 58.6
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 2.8e-96 356.3 294 59.9
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 2.8e-96 356.3 293 57.3
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 4.8e-96 355.5 293 56.7
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 6.3e-96 355.1 293 59.0
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 1.1e-95 354.4 293 58.4
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 1.8e-95 353.6 293 59.0
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 5.3e-95 352.1 292 58.9
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 9.1e-95 351.3 295 58.0
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 1.6e-94 350.5 293 56.7
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.7e-94 349.7 294 57.5
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 2.7e-94 349.7 295 58.3
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 2.7e-94 349.7 294 59.2
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 2.7e-94 349.7 314 56.7
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 3.5e-94 349.4 311 56.3
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 4.5e-94 349.0 295 62.4
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 7.7e-94 348.2 294 57.8
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 7.7e-94 348.2 295 58.0
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.0e-93 347.8 294 57.5
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 2.9e-93 346.3 295 58.3
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 8.5e-93 344.7 291 58.1
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 1.1e-92 344.4 294 57.5
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 1.9e-92 343.6 294 55.8
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 1.9e-92 343.6 295 58.0
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.5e-92 343.2 295 56.3
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.1e-91 340.1 295 56.3
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 2.7e-91 339.7 293 57.3
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 8.0e-91 338.2 295 55.9
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.4e-90 337.4 294 56.8
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 3.0e-90 336.3 295 56.9
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 4.0e-90 335.9 294 56.1
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 5.2e-90 335.5 294 58.2
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 6.8e-90 335.1 296 57.8
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 6.8e-90 335.1 295 56.9
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 2.0e-89 333.6 295 57.3
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 2.0e-89 333.6 295 56.9
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 2.0e-89 333.6 295 57.3
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 4.4e-89 332.4 291 57.0
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 5.7e-89 332.0 296 57.4
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 5.7e-89 332.0 310 58.4
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 2.2e-88 330.1 291 55.3
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 3.7e-88 329.3 286 59.4
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 1.6e-86 323.9 292 54.1
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.1e-84 317.8 266 58.6
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 3.3e-84 316.2 304 52.6
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 2.8e-83 313.2 293 54.9
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 8.0e-83 311.6 251 63.7
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 1.8e-82 310.5 255 60.4
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 9.8e-81 304.7 251 62.5
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 2.0e-78 297.0 297 51.9
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 2.7e-78 296.6 254 61.8
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 4.5e-78 295.8 257 57.6
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 2.3e-77 293.5 224 64.7
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 8.6e-77 291.6 237 60.3
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 2.5e-76 290.0 259 55.6
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 3.3e-76 289.7 255 61.2
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 3.3e-76 289.7 252 56.7
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 3.6e-75 286.2 300 52.3
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 1.0e-74 284.6 296 52.0
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 1.2e-67 261.2 224 57.1
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 1.1e-66 258.1 225 56.9
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 1.8e-66 257.3 305 47.2
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 4.0e-66 256.1 211 58.8
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 7.1e-63 245.4 225 56.4
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 2.5e-60 236.9 250 51.2
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 5.6e-60 235.7 226 53.1
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 1.1e-58 231.5 298 44.6
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 4.9e-56 222.6 290 45.2
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 4.9e-56 222.6 316 40.8
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 6.4e-56 222.2 292 43.5
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 3.2e-55 219.9 187 59.9
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 5.1e-53 212.6 295 41.7
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 8.6e-53 211.8 154 63.6
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 2.3e-45 187.2 178 55.1
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 8.7e-45 185.3 211 48.3
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 4.0e-42 176.4 155 55.5
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 2.0e-41 174.1 162 51.9
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 3.8e-40 169.9 142 65.5
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.7e-37 161.0 138 54.3
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 7.3e-36 155.6 160 53.8
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 1.8e-34 151.0 106 67.9
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 4.5e-33 146.4 239 41.4
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 5.8e-33 146.0 150 52.0
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 4.2e-31 139.8 227 33.5
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 3.7e-27 126.7 86 66.3
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 1.4e-26 124.8 147 46.9
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.2e-25 121.7 72 69.4
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 1.9e-20 104.4 145 41.4
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 2.1e-19 100.9 74 62.2
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 6.2e-19 99.4 74 60.8
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 1.1e-18 98.6 118 44.1
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.7e-16 91.3 153 36.6
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.2e-15 87.0 166 36.1
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 1.0e-13 82.0 148 37.2
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 3.9e-13 80.1 70 50.0
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 5.1e-13 79.7 106 46.2
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.5e-12 78.2 176 33.5
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 4.5e-09 66.6 37 81.1
HanXRQChr01g0029231 Helianthus annuus HOM05D005679 ORTHO05D007228 7.9e-06 55.8 87 43.7


User provided reference genes

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