Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 1.4e-65 253.1 154 100.0
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 5.4e-57 224.6 151 89.4
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.6e-32 143.3 157 61.8
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.9e-31 138.7 157 62.4
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 8.9e-28 127.5 159 59.1
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 5.4e-25 118.2 126 53.2
SGA_v2.0_scaffold75G24748 Striga asiatica HOM05D006536 ORTHO05D005877 3.9e-23 112.1 116 50.9
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 1.9e-22 109.8 135 48.9
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 2.9e-18 95.9 113 44.2
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 4.9e-18 95.1 116 45.7
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 1.9e-17 93.2 114 46.5
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 5.4e-17 91.7 110 43.6
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 7.1e-17 91.3 130 43.8
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 4.6e-16 88.6 114 49.1
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 1.3e-15 87.0 114 48.2
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 5.1e-15 85.1 121 48.8
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 5.1e-15 85.1 114 43.9
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 8.7e-15 84.3 124 42.7
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.5e-14 82.8 113 41.6
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 4.3e-14 82.0 116 44.8
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 7.3e-14 81.3 116 43.1
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 9.6e-14 80.9 91 50.5
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 9.6e-14 80.9 112 40.2
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.3e-13 80.5 110 41.8
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.8e-13 78.6 121 40.5
Oeu007646.1 Olea europaea HOM05D006536 ORTHO05D005877 4.8e-13 78.6 113 37.2
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 8.1e-13 77.8 117 37.6
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 2.4e-12 76.3 122 42.6
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 5.3e-12 75.1 100 44.0
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 6.9e-12 74.7 123 38.2
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 9.0e-12 74.3 113 38.1
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.2e-11 73.9 122 41.8
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.2e-11 73.9 112 36.6
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.2e-11 73.9 118 42.4
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.6e-11 72.8 113 37.2
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 4.5e-11 72.0 116 34.5
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 4.5e-11 72.0 127 35.4
SalBow3G3753 Salvia bowleyana HOM05D006536 ORTHO05D005877 4.5e-11 72.0 84 50.0
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 5.8e-11 71.6 108 40.7
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 5.8e-11 71.6 127 35.4
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 2.2e-10 69.7 135 33.3
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 2.2e-10 69.7 113 36.3
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.8e-10 68.9 118 36.4
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 3.8e-10 68.9 111 40.5
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.8e-10 68.9 113 36.3
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.9e-10 68.6 113 36.3
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 4.9e-10 68.6 112 35.7
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 6.4e-10 68.2 85 50.6
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 6.4e-10 68.2 113 34.5
Oeu022218.1 Olea europaea HOM05D006536 ORTHO05D005877 8.4e-10 67.8 115 33.9
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.1e-09 67.4 117 36.8
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 1.1e-09 67.4 104 35.6
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 1.9e-09 66.6 118 35.6
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.9e-09 66.6 112 36.6
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.9e-09 66.6 123 35.0
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.4e-09 66.2 117 33.3
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 2.4e-09 66.2 111 39.6
ECA236G3141 Erigeron canadensis HOM05D009374 ORTHO05D012864 3.2e-09 65.9 111 36.9
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.2e-09 65.9 124 35.5
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 4.2e-09 65.5 115 37.4
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 5.5e-09 65.1 117 33.3
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 7.1e-09 64.7 113 33.6
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 9.3e-09 64.3 122 38.5
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 9.3e-09 64.3 113 37.2
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.2e-08 63.9 115 35.7
Lsat_1_v5_gn_7_93341 Lactuca sativa HOM05D009374 ORTHO05D012864 1.6e-08 63.5 123 34.1
Lsat_1_v5_gn_7_93361 Lactuca sativa HOM05D009374 ORTHO05D012864 1.6e-08 63.5 123 34.1
Lsat_1_v5_gn_7_93381 Lactuca sativa HOM05D009374 ORTHO05D012864 1.6e-08 63.5 123 34.1
Lsat_1_v5_gn_7_93441 Lactuca sativa HOM05D009374 ORTHO05D012864 1.6e-08 63.5 123 34.1
Lsat_1_v5_gn_7_93500 Lactuca sativa HOM05D009374 ORTHO05D012864 1.6e-08 63.5 123 34.1
Lsat_1_v5_gn_7_93520 Lactuca sativa HOM05D009374 ORTHO05D012864 1.6e-08 63.5 123 34.1
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.6e-08 63.5 115 39.1
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 1.6e-08 63.5 104 36.5
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 2.1e-08 63.2 118 36.4
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 2.1e-08 63.2 116 34.5
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 2.7e-08 62.8 118 33.1
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 2.7e-08 62.8 114 34.2
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 3.5e-08 62.4 108 33.3
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.5e-08 62.4 121 34.7
Migut.M01805 Erythranthe guttata HOM05D036104 ORTHO05D035166 7.9e-08 61.2 126 33.3
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 7.9e-08 61.2 121 33.9
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 1.3e-07 60.5 121 34.7
SalBow3G0923 Salvia bowleyana HOM05D006536 ORTHO05D003608 1.8e-07 60.1 56 58.9
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.8e-07 60.1 125 33.6
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.8e-07 60.1 119 35.3
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 3.0e-07 59.3 116 34.5
Lsat_1_v5_gn_7_108000 Lactuca sativa HOM05D009374 ORTHO05D012864 5.1e-07 58.5 126 34.9
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.1e-07 58.5 122 35.2
Nitab4.5_0000397g0180 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.7e-07 58.2 79 40.5
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 8.7e-07 57.8 115 34.8
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.1e-06 57.4 134 35.8
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 1.9e-06 56.6 124 30.6
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 1.9e-06 56.6 124 30.6
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.3e-06 55.8 127 30.7
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 3.3e-06 55.8 117 31.6
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 4.3e-06 55.5 84 39.3
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.6e-06 55.1 121 33.1
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.6e-06 55.1 121 33.1
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.6e-06 55.1 121 33.1
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 7.4e-06 54.7 122 31.1
ATR0686G133 Amborella trichopoda HOM05D031825 ORTHO05D005877 9.6e-06 54.3 107 31.8
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 9.6e-06 54.3 108 27.8
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 9.6e-06 54.3 104 32.7
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 9.6e-06 54.3 99 33.3


User provided reference genes

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