Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 3.3e-223 778.1 408 100.0
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 2.7e-55 220.3 151 89.4
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.2e-33 147.5 152 66.4
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.2e-32 143.7 154 64.9
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 5.1e-30 136.3 152 61.2
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 4.6e-23 113.2 155 56.8
SGA_v2.0_scaffold75G24748 Striga asiatica HOM05D006536 ORTHO05D005877 1.3e-20 105.1 159 46.5
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 1.6e-20 104.8 156 45.5
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 5.3e-19 99.8 146 40.4
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 3.8e-17 93.6 112 48.2
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 6.5e-17 92.8 145 41.4
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 2.7e-15 87.4 157 40.8
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 6.1e-15 86.3 151 44.4
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 1.8e-14 84.7 119 47.9
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 2.3e-14 84.3 148 38.5
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 2.3e-14 84.3 145 39.3
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 3.9e-14 83.6 122 43.4
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.1e-14 83.2 145 37.9
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 5.1e-14 83.2 119 47.1
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 8.7e-14 82.4 122 38.5
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.5e-13 81.6 145 37.2
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 1.5e-13 81.6 157 37.6
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 3.3e-13 80.5 183 32.2
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.3e-13 80.5 112 42.0
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 5.7e-13 79.7 150 40.0
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.4e-13 79.3 122 41.0
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 9.7e-13 79.0 145 36.6
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.6e-12 78.2 127 37.8
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 2.2e-12 77.8 125 40.0
Oeu007646.1 Olea europaea HOM05D006536 ORTHO05D005877 2.2e-12 77.8 114 39.5
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 2.2e-12 77.8 116 42.2
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 1.1e-11 75.5 93 48.4
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 1.1e-11 75.5 145 34.5
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.8e-11 74.7 149 37.6
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.4e-11 74.3 145 44.1
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 4.1e-11 73.6 152 32.9
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 6.9e-11 72.8 122 40.2
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 1.2e-10 72.0 123 37.4
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 1.5e-10 71.6 133 35.3
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 3.4e-10 70.5 151 38.4
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.5e-10 70.1 114 36.0
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.9e-10 69.7 145 34.5
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 5.9e-10 69.7 119 42.9
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 7.7e-10 69.3 155 34.8
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.0e-09 68.9 124 34.7
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.2e-09 67.8 152 34.9
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 2.2e-09 67.8 114 36.0
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.2e-09 67.8 128 35.2
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 2.9e-09 67.4 113 38.1
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 2.9e-09 67.4 118 42.4
Oeu022218.1 Olea europaea HOM05D006536 ORTHO05D005877 2.9e-09 67.4 113 34.5
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 3.8e-09 67.0 144 34.0
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.8e-09 67.0 121 36.4
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 5.0e-09 66.6 109 42.2
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 5.0e-09 66.6 105 37.1
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.5e-09 66.2 151 31.8
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 8.5e-09 65.9 118 37.3
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.4e-08 65.1 113 38.9
ECA236G3141 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.4e-08 65.1 113 40.7
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 1.9e-08 64.7 105 38.1
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 2.5e-08 64.3 131 34.4
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.5e-08 64.3 124 33.1
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.2e-08 63.9 114 34.2
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 4.2e-08 63.5 145 33.8
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 5.5e-08 63.2 122 39.3
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 7.2e-08 62.8 109 33.9
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.6e-07 61.6 145 36.6
Migut.M01805 Erythranthe guttata HOM05D036104 ORTHO05D035166 1.6e-07 61.6 153 40.5
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 1.6e-07 61.6 115 35.7
Lsat_1_v5_gn_7_108000 Lactuca sativa HOM05D009374 ORTHO05D012864 2.1e-07 61.2 127 36.2
Lsat_1_v5_gn_7_93341 Lactuca sativa HOM05D009374 ORTHO05D012864 2.1e-07 61.2 178 28.7
Lsat_1_v5_gn_7_93361 Lactuca sativa HOM05D009374 ORTHO05D012864 2.1e-07 61.2 178 28.7
Lsat_1_v5_gn_7_93381 Lactuca sativa HOM05D009374 ORTHO05D012864 2.1e-07 61.2 178 28.7
Lsat_1_v5_gn_7_93441 Lactuca sativa HOM05D009374 ORTHO05D012864 2.1e-07 61.2 178 28.7
Lsat_1_v5_gn_7_93500 Lactuca sativa HOM05D009374 ORTHO05D012864 2.1e-07 61.2 178 28.7
Lsat_1_v5_gn_7_93520 Lactuca sativa HOM05D009374 ORTHO05D012864 2.1e-07 61.2 178 28.7
SalBow3G3753 Salvia bowleyana HOM05D006536 ORTHO05D005877 2.1e-07 61.2 77 49.4
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 2.1e-07 61.2 122 34.4
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 2.7e-07 60.8 130 33.8
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 2.7e-07 60.8 130 33.8
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.7e-07 60.8 114 35.1
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 4.6e-07 60.1 147 27.9
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.6e-07 60.1 117 37.6
SalBow3G0923 Salvia bowleyana HOM05D006536 ORTHO05D003608 4.6e-07 60.1 51 60.8
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 4.6e-07 60.1 118 33.9
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 6.1e-07 59.7 144 28.5
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 6.1e-07 59.7 112 33.9
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 6.1e-07 59.7 150 33.3
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.1e-07 59.7 124 33.1
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.1e-07 59.7 124 33.1
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.1e-07 59.7 124 33.1
ECA248G3520 Erigeron canadensis HOM05D009374 ORTHO05D012864 7.9e-07 59.3 160 28.1
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 2.3e-06 57.8 156 32.7
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.9e-06 57.0 122 34.4
ECA236G3076 Erigeron canadensis HOM05D009374 ORTHO05D012864 6.7e-06 56.2 79 43.0
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 8.8e-06 55.8 110 29.1


User provided reference genes

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