Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06711 Striga asiatica HOM05D001997 ORTHO05D005560 4.8e-54 214.2 101 100.0
MSTRG.22024 Avicennia marina HOM05D001997 ORTHO05D005560 1.4e-08 63.2 31 90.3
Migut.M00095 Erythranthe guttata HOM05D001997 ORTHO05D005560 1.4e-08 63.2 31 90.3
Migut.N03073 Erythranthe guttata HOM05D001997 ORTHO05D005560 1.4e-08 63.2 31 90.3
Oeu032138.1 Olea europaea HOM05D001997 ORTHO05D005560 1.4e-08 63.2 31 90.3
SalBow2G2973 Salvia bowleyana HOM05D001997 ORTHO05D005560 1.4e-08 63.2 31 90.3
MSTRG.24567 Avicennia marina HOM05D001997 ORTHO05D005560 4.0e-08 61.6 31 87.1
SGA_v2.0_scaffold25G10995 Striga asiatica HOM05D000987 ORTHO05D000831 5.2e-08 61.2 31 87.1
ATR0075G039 Amborella trichopoda HOM05D001997 ORTHO05D005560 1.1e-07 60.1 33 78.8
unitig_27.g24921 Utricularia gibba HOM05D001997 ORTHO05D005560 1.5e-07 59.7 31 83.9
CAN.G103.22 Capsicum annuum HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
Nitab4.5_0001586g0040 Nicotiana tabacum HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
Nitab4.5_0004056g0040 Nicotiana tabacum HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
Oeu007674.1 Olea europaea HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
Peaxi162Scf00180g00117 Petunia axillaris HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
Solyc06g053385.2 Solanum lycopersicum HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
Sopen06g018440 Solanum pennellii HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
PGSC0003DMG400016301 Solanum tuberosum HOM05D001997 ORTHO05D005560 2.6e-07 58.9 31 83.9
Gorai.005G124400 Gossypium raimondii HOM05D001997 ORTHO05D005560 3.3e-07 58.5 39 64.1
CDE07G0374 Ceratophyllum demersum HOM05D001997 ORTHO05D005560 4.4e-07 58.2 33 75.8
Cc10_g09020 Coffea canephora HOM05D001997 ORTHO05D005560 5.7e-07 57.8 38 68.4
CSS0005460 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D005560 7.5e-07 57.4 33 75.8
CSS0042570 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D005560 7.5e-07 57.4 33 75.8
QL10p053341 Quercus lobata HOM05D001997 ORTHO05D005560 7.5e-07 57.4 33 75.8
Rhsim02G0083500 Rhododendron simsii HOM05D001997 ORTHO05D005560 7.5e-07 57.4 33 75.8
TWI15G0247 Tripterygium wilfordii HOM05D001997 ORTHO05D005560 7.5e-07 57.4 33 75.8
TWI63G1293 Tripterygium wilfordii HOM05D001997 ORTHO05D005560 7.5e-07 57.4 33 75.8
Atru.chr4.1389 Acer truncatum HOM05D001997 ORTHO05D005560 9.7e-07 57.0 31 80.6
HPP92_004665 Vanilla planifolia HOM05D001997 ORTHO05D005560 9.7e-07 57.0 33 72.7
Thecc.04G168000 Theobroma cacao HOM05D001997 ORTHO05D005560 1.3e-06 56.6 33 75.8
Ciclev10022891m.g Citrus clementina HOM05D001997 ORTHO05D005560 1.7e-06 56.2 31 77.4
Dinv02939 Davidia involucrata HOM05D001997 ORTHO05D005560 1.7e-06 56.2 31 80.6
Lsat_1_v5_gn_3_138061 Lactuca sativa HOM05D001997 ORTHO05D005560 1.7e-06 56.2 41 65.9
TAR362G0574 Trochodendron aralioides HOM05D001997 ORTHO05D005560 1.7e-06 56.2 33 72.7
CSS0004625 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D005560 2.2e-06 55.8 37 64.9
Atru.chr12.1238 Acer truncatum HOM05D001997 ORTHO05D005560 2.8e-06 55.5 31 77.4
CSS0006622 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D005560 2.8e-06 55.5 33 72.7
QL10p054519 Quercus lobata HOM05D001997 ORTHO05D005560 2.8e-06 55.5 33 72.7
Gohir.D02G109200 Gossypium hirsutum HOM05D001997 ORTHO05D005560 3.7e-06 55.1 33 72.7
HanXRQChr14g0432491 Helianthus annuus HOM05D001997 ORTHO05D005560 3.7e-06 55.1 31 80.6
Aa31LG1G25360 Aethionema arabicum HOM05D001997 ORTHO05D005560 4.8e-06 54.7 35 68.6
Eucgr.A00017 Eucalyptus grandis HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
FvH4_5g22590 Fragaria vesca HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
FAN04G0119 Fragaria x ananassa HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
FAN08G3153 Fragaria x ananassa HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
FAN13G1284 Fragaria x ananassa HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
FAN18G2915 Fragaria x ananassa HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
MD08G1231600 Malus domestica HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
MD15G1424200 Malus domestica HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
Prupe.1G570200 Prunus persica HOM05D001997 ORTHO05D005560 4.8e-06 54.7 33 69.7
MBI08_g25560_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D005560 6.3e-06 54.3 30 73.3
Manes.04G036800 Manihot esculenta HOM05D001997 ORTHO05D005560 6.3e-06 54.3 33 69.7
Manes.16G067100 Manihot esculenta HOM05D001997 ORTHO05D005560 6.3e-06 54.3 33 69.7
Haze_01373 Corylus avellana HOM05D001997 ORTHO05D004620 8.2e-06 53.9 33 72.7


User provided reference genes

Program Settings