Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06629 Striga asiatica HOM05D003781 ORTHO05D004299 4.6e-219 764.2 379 100.0
MSTRG.5897 Avicennia marina HOM05D003781 ORTHO05D004299 1.2e-126 457.2 352 66.5
Migut.J00706 Erythranthe guttata HOM05D003781 ORTHO05D004299 3.1e-122 442.6 353 66.0
SalBow8G0162 Salvia bowleyana HOM05D003781 ORTHO05D004299 2.0e-113 413.3 348 60.9
Dinv12337 Davidia involucrata HOM05D003781 ORTHO05D004299 7.4e-108 394.8 363 59.0
Oeu034092.2 Olea europaea HOM05D003781 ORTHO05D004299 8.2e-107 391.3 354 59.9
Nitab4.5_0001122g0140 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.1e-103 380.9 348 58.3
Dinv31756 Davidia involucrata HOM05D003781 ORTHO05D004299 2.5e-103 379.8 361 55.1
Nitab4.5_0000020g0070 Nicotiana tabacum HOM05D003781 ORTHO05D004299 5.5e-103 378.6 348 58.0
Peaxi162Scf00586g00012 Petunia axillaris HOM05D003781 ORTHO05D004299 1.4e-101 374.0 360 55.6
Oeu052621.2 Olea europaea HOM05D003781 ORTHO05D004299 4.3e-100 369.0 286 65.7
PGSC0003DMG400021351 Solanum tuberosum HOM05D003781 ORTHO05D004299 1.7e-99 367.1 359 56.3
CAN.G170.93 Capsicum annuum HOM05D003781 ORTHO05D004299 2.8e-99 366.3 355 56.1
Solyc01g007160.4 Solanum lycopersicum HOM05D003781 ORTHO05D004299 6.3e-99 365.2 359 56.0
Cc06_g06510 Coffea canephora HOM05D003781 ORTHO05D004299 8.2e-99 364.8 353 56.7
vmacro07475 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 2.4e-98 363.2 363 54.8
Sopen01g003140 Solanum pennellii HOM05D003781 ORTHO05D004299 3.1e-98 362.8 359 56.0
DCAR_009179 Daucus carota HOM05D003781 ORTHO05D004299 2.5e-95 353.2 367 53.4
Sopen01g052480 Solanum pennellii HOM05D003781 ORTHO05D004299 1.0e-93 347.8 353 54.1
Actinidia03891 Actinidia chinensis HOM05D003781 ORTHO05D004299 5.1e-93 345.5 363 53.2
Actinidia04001 Actinidia chinensis HOM05D003781 ORTHO05D004299 5.1e-93 345.5 363 53.2
ECA248G2654 Erigeron canadensis HOM05D003781 ORTHO05D004299 2.0e-92 343.6 372 51.6
HanXRQChr01g0025751 Helianthus annuus HOM05D003781 ORTHO05D004299 2.0e-92 343.6 355 50.4
Potri.016G070800 Populus trichocarpa HOM05D003781 ORTHO05D004299 3.3e-92 342.8 364 51.6
Lsat_1_v5_gn_1_58161 Lactuca sativa HOM05D003781 ORTHO05D004299 9.7e-92 341.3 362 52.5
TAR636G1975 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.7e-91 340.5 359 53.5
Ciclev10012131m.g Citrus clementina HOM05D003781 ORTHO05D004299 2.8e-91 339.7 347 53.3
GSVIVG01029568001 Vitis vinifera HOM05D003781 ORTHO05D004299 4.8e-91 339.0 375 50.7
unitig_26.g10109 Utricularia gibba HOM05D003781 ORTHO05D004299 1.1e-90 337.8 362 50.6
GSVIVG01037869001 Vitis vinifera HOM05D003781 ORTHO05D004299 1.1e-90 337.8 377 50.1
Lsat_1_v5_gn_6_113040 Lactuca sativa HOM05D003781 ORTHO05D004299 4.1e-90 335.9 374 50.3
TAR633G0070 Trochodendron aralioides HOM05D003781 ORTHO05D004299 9.1e-90 334.7 363 52.3
Duzib093G1220 Durio zibethinus HOM05D003781 ORTHO05D004299 1.7e-88 330.5 357 51.0
CiPaw.09G020700 Carya illinoinensis HOM05D003781 ORTHO05D004299 2.2e-88 330.1 368 50.5
Cpa.g.sc10.172 Carica papaya HOM05D003781 ORTHO05D004299 3.8e-88 329.3 361 50.4
Sabra16G0070900 Salix brachista HOM05D003781 ORTHO05D004299 5.0e-88 328.9 373 50.4
Sabra16G0073100 Salix brachista HOM05D003781 ORTHO05D004299 5.0e-88 328.9 373 50.4
Solyc01g110330.3 Solanum lycopersicum HOM05D003781 ORTHO05D004299 6.5e-88 328.6 347 53.0
Nn2g14295 Nelumbo nucifera HOM05D003781 ORTHO05D004299 3.2e-87 326.2 365 50.7
QL04p046781 Quercus lobata HOM05D003781 ORTHO05D004299 9.4e-87 324.7 363 51.5
QL04p047257 Quercus lobata HOM05D003781 ORTHO05D004299 1.2e-86 324.3 363 51.8
PSO541G6247 Papaver somniferum HOM05D003781 ORTHO05D004299 6.1e-86 322.0 353 50.1
PGR142G3230 Punica granatum HOM05D003781 ORTHO05D004299 6.1e-86 322.0 356 49.2
Atru.chr8.1371 Acer truncatum HOM05D003781 ORTHO05D004299 1.0e-85 321.2 355 49.9
QL07p036815 Quercus lobata HOM05D003781 ORTHO05D004299 1.0e-85 321.2 363 50.4
TWI74G1316 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 2.3e-85 320.1 362 49.7
Thhalv10027115m.g Eutrema salsugineum HOM05D003781 ORTHO05D004299 1.1e-84 317.8 341 49.3
Rhsim03G0064900 Rhododendron simsii HOM05D003781 ORTHO05D004299 5.7e-84 315.5 366 50.8
Thecc.05G103800 Theobroma cacao HOM05D003781 ORTHO05D004299 7.4e-84 315.1 360 49.7
TWI53G0607 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 9.7e-84 314.7 355 50.1
Gorai.006G149700 Gossypium raimondii HOM05D003781 ORTHO05D004299 2.2e-83 313.5 358 49.4
Gohir.D09G131000 Gossypium hirsutum HOM05D003781 ORTHO05D004299 3.7e-83 312.8 358 49.4
PSO675G8110 Papaver somniferum HOM05D003781 ORTHO05D004299 3.7e-83 312.8 353 49.3
Haze_20190 Corylus avellana HOM05D003781 ORTHO05D004299 4.8e-83 312.4 359 50.7
Prupe.7G095100 Prunus persica HOM05D003781 ORTHO05D004299 6.3e-83 312.0 359 49.3
Actinidia31110 Actinidia chinensis HOM05D003781 ORTHO05D004299 1.1e-82 311.2 348 46.6
AUR62036398 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.1e-82 311.2 351 48.4
Hund10883 Selenicereus undatus HOM05D003781 ORTHO05D004299 2.4e-82 310.1 346 50.6
EL10Ac5g12476 Beta vulgaris HOM05D003781 ORTHO05D004299 3.1e-82 309.7 363 49.0
HanXRQChr16g0532941 Helianthus annuus HOM05D003781 ORTHO05D004299 3.1e-82 309.7 265 55.8
FAN14G3039 Fragaria x ananassa HOM05D003781 ORTHO05D004299 9.1e-82 308.1 362 47.5
THA.LOC104809956 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 1.2e-81 307.8 364 48.4
FvH4_6g20270 Fragaria vesca HOM05D003781 ORTHO05D004299 2.0e-81 307.0 362 47.5
Aa31LG2G18950 Aethionema arabicum HOM05D003781 ORTHO05D004299 2.6e-81 306.6 348 49.7
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 2.6e-81 306.6 311 51.4
AT4G31400 Arabidopsis thaliana HOM05D003781 ORTHO05D004299 1.0e-80 304.7 349 48.1
Hma1.2p1_0064F.1_g034690 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 1.3e-80 304.3 339 51.6
Aqoxy1G00670 Aquilegia oxysepala HOM05D003781 ORTHO05D004299 2.2e-80 303.5 358 47.2
AUR62030753 Chenopodium quinoa HOM05D003781 ORTHO05D004299 2.9e-80 303.1 368 46.5
Lj1g0015362 Lotus japonicus HOM05D003781 ORTHO05D004299 3.8e-80 302.8 353 48.7
FAN02G2206 Fragaria x ananassa HOM05D003781 ORTHO05D004299 6.5e-80 302.0 362 47.5
arahy.Tifrunner.gnm1.ann1.WYX60D Arachis hypogaea HOM05D003781 ORTHO05D004299 8.5e-80 301.6 268 55.6
Sp7g29260 Schrenkiella parvula HOM05D003781 ORTHO05D004299 8.5e-80 301.6 352 47.2
Manes.08G033100 Manihot esculenta HOM05D003781 ORTHO05D004299 1.1e-79 301.2 363 48.2
Lalb_Chr18g0056351 Lupinus albus HOM05D003781 ORTHO05D004299 1.5e-79 300.8 357 48.5
arahy.Tifrunner.gnm1.ann1.GQX3NW Arachis hypogaea HOM05D003781 ORTHO05D004299 2.5e-79 300.1 268 55.2
CSS0048701 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 2.5e-79 300.1 353 49.0
MD14G1038400 Malus domestica HOM05D003781 ORTHO05D004299 2.5e-79 300.1 362 48.6
Haze_19697 Corylus avellana HOM05D003781 ORTHO05D004299 3.2e-79 299.7 347 50.7
BcaNung04576 Brassica carinata HOM05D003781 ORTHO05D004299 5.5e-79 298.9 346 47.4
PGR142G3605 Punica granatum HOM05D003781 ORTHO05D004299 1.2e-78 297.7 345 48.4
RcHm_v2.0_Chr1g0331051 Rosa chinensis HOM05D003781 ORTHO05D004299 1.2e-78 297.7 365 46.0
RcHm_v2.0_Chr3g0475861 Rosa chinensis HOM05D003781 ORTHO05D004299 3.6e-78 296.2 365 45.8
BolC7t46313H Brassica oleracea HOM05D003781 ORTHO05D004299 1.4e-77 294.3 348 46.8
A03p60680 Brassica napus HOM05D003781 ORTHO05D004299 2.3e-77 293.5 359 47.9
BraA03t15109Z Brassica rapa HOM05D003781 ORTHO05D004299 2.3e-77 293.5 359 47.9
MD12G1039800 Malus domestica HOM05D003781 ORTHO05D004299 2.3e-77 293.5 361 48.5
MBI04_g43653_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 4.0e-77 292.7 366 48.4
MBI04_g47396_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 4.0e-77 292.7 371 47.4
A08p18640 Brassica napus HOM05D003781 ORTHO05D004299 5.2e-77 292.4 357 46.8
Hma1.2p1_0381F.1_g140000 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 5.2e-77 292.4 353 47.6
C07p58580 Brassica napus HOM05D003781 ORTHO05D004299 8.8e-77 291.6 355 47.6
CsaV3_3G037920 Cucumis sativus L. HOM05D003781 ORTHO05D004299 8.8e-77 291.6 365 48.5
CiPaw.10G017000 Carya illinoinensis HOM05D003781 ORTHO05D004299 1.5e-76 290.8 350 48.3
CARHR239280 Cardamine hirsuta HOM05D003781 ORTHO05D004299 4.4e-76 289.3 348 45.7
Medtr0036s0040 Medicago truncatula HOM05D003781 ORTHO05D004299 4.4e-76 289.3 269 54.6
Sed0000357 Sechium edule HOM05D003781 ORTHO05D004299 4.4e-76 289.3 268 55.6
Ca_03587_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 5.7e-76 288.9 263 53.6
Carub.0007s0916 Capsella rubella HOM05D003781 ORTHO05D004299 1.3e-75 287.7 342 44.7
FAN09G0267 Fragaria x ananassa HOM05D003781 ORTHO05D004299 2.2e-75 287.0 395 43.0
Lj2A35G43 Lonicera japonica HOM05D003781 ORTHO05D004299 2.8e-75 286.6 295 50.5
MELO3C009536.2 Cucumis melo HOM05D003781 ORTHO05D004299 4.8e-75 285.8 361 47.1
FAN05G1631 Fragaria x ananassa HOM05D003781 ORTHO05D004299 4.8e-75 285.8 394 43.1
FAN05G5379 Fragaria x ananassa HOM05D003781 ORTHO05D004299 4.8e-75 285.8 394 43.1
Psat5g299360 Pisum sativum HOM05D003781 ORTHO05D004299 4.8e-75 285.8 263 53.6
Phvul.001G195300 Phaseolus vulgaris HOM05D003781 ORTHO05D004299 8.2e-75 285.0 358 44.1
BraA08t33827Z Brassica rapa HOM05D003781 ORTHO05D004299 5.3e-74 282.3 351 45.3
Ah.04g152350 Amaranthus hybridus HOM05D003781 ORTHO05D000148 7.0e-74 282.0 357 46.8
Ca_17838_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 1.2e-73 281.2 263 54.4
CANSAT01G0129 Cannabis sativa HOM05D003781 ORTHO05D004299 2.0e-73 280.4 318 47.8
Eucgr.K02618 Eucalyptus grandis HOM05D003781 ORTHO05D004299 2.0e-73 280.4 276 55.1
Nitab4.5_0002858g0040 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.7e-72 277.3 306 54.2
C03p88000 Brassica napus HOM05D003781 ORTHO05D004299 6.5e-72 275.4 268 50.7
CDE06G0061 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 8.5e-72 275.0 358 44.7
VMungo0464G1804 Vigna mungo HOM05D003781 ORTHO05D004299 8.5e-72 275.0 265 52.1
Medtr2g102470 Medicago truncatula HOM05D003781 ORTHO05D004299 1.1e-71 274.6 346 46.5
VMungo1383G2961 Vigna mungo HOM05D003781 ORTHO05D004299 2.5e-71 273.5 264 51.9
Nitab4.5_0008187g0010 Nicotiana tabacum HOM05D003781 ORTHO05D004299 9.4e-71 271.6 343 47.8
Rhsim09G0141200 Rhododendron simsii HOM05D003781 ORTHO05D004299 2.1e-70 270.4 395 41.8
SGA_v2.0_scaffold31G12848 Striga asiatica HOM05D003781 ORTHO05D004299 2.7e-70 270.0 191 71.7
TPR.G37223 Trifolium pratense HOM05D003781 ORTHO05D004299 2.7e-70 270.0 254 53.5
Glyma.19G200100 Glycine max HOM05D003781 ORTHO05D004299 6.1e-70 268.9 263 52.9
Glyma.19G199100 Glycine max HOM05D003781 ORTHO05D004299 3.0e-69 266.5 263 52.5
AL7G20660 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 4.0e-69 266.2 307 48.9
Os04g0498900 Oryza sativa ssp. japonica HOM05D003781 ORTHO05D004299 4.0e-69 266.2 320 47.2
CDE08G1154 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 9.8e-68 261.5 290 46.6
BolC3t21111H Brassica oleracea HOM05D003781 ORTHO05D004299 6.3e-67 258.8 269 50.9
Zm00001eb078390 Zea mays HOM05D003781 ORTHO05D004299 6.3e-67 258.8 269 49.8
Zm00001eb078410 Zea mays HOM05D003781 ORTHO05D004299 6.3e-67 258.8 269 49.8
Zm00001eb078400 Zea mays HOM05D003781 ORTHO05D004299 8.3e-67 258.5 269 49.8
ClCG10G018370 Citrullus lanatus HOM05D003781 ORTHO05D004299 1.6e-65 254.2 320 47.5
RhsimUnG0138100 Rhododendron simsii HOM05D003781 ORTHO05D004299 3.5e-65 253.1 354 42.9
Sed0026509 Sechium edule HOM05D003781 ORTHO05D004299 1.0e-64 251.5 364 42.9
Lj1A1051T45 Lonicera japonica HOM05D003781 ORTHO05D004299 2.5e-63 246.9 250 51.2
vmacro10320 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 9.5e-63 245.0 232 51.7
PSO675G6385 Papaver somniferum HOM05D003781 ORTHO05D004299 1.2e-62 244.6 264 51.1
BcaB03g12691 Brassica carinata HOM05D003781 ORTHO05D004299 6.1e-62 242.3 305 45.6
CSS0029856 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 1.0e-61 241.5 310 46.5
HPP92_023079 Vanilla planifolia HOM05D003781 ORTHO05D004299 2.3e-61 240.4 368 41.3
BcaC01g01091 Brassica carinata HOM05D003781 ORTHO05D004299 5.7e-60 235.7 229 50.2
ATR0772G111 Amborella trichopoda HOM05D003781 ORTHO05D004299 1.3e-59 234.6 336 41.7
Gohir.A09G134500 Gossypium hirsutum HOM05D003781 ORTHO05D004299 1.8e-53 214.2 356 39.6
AUR62040627 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.3e-51 208.0 245 47.3
SEGI_09697 Sequoiadendron giganteum HOM05D003781 ORTHO05D004299 1.4e-50 204.5 314 38.2
THA.LOC104816619 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 3.2e-50 203.4 217 50.2
Cc02_g09440 Coffea canephora HOM05D003781 ORTHO05D004299 8.6e-48 195.3 260 43.5
Pp3c11_11100 Physcomitrium patens HOM05D003781 ORTHO05D004299 1.1e-47 194.9 361 36.8
BcaNung01523 Brassica carinata HOM05D003781 ORTHO05D004299 3.6e-46 189.9 318 39.0
ATR1127G225 Amborella trichopoda HOM05D003781 ORTHO05D004299 8.3e-43 178.7 318 38.4
RhsimUnG0138400 Rhododendron simsii HOM05D003781 ORTHO05D004299 2.7e-41 173.7 181 51.9
SMO367G1200 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 7.8e-41 172.2 323 36.5
HanXRQChr03g0072391 Helianthus annuus HOM05D003781 ORTHO05D004299 7.5e-36 155.6 217 40.6
Sc07g0006420 Simmondsia chinensis HOM05D003781 ORTHO05D004299 9.9e-36 155.2 213 43.7
HanXRQChr15g0472861 Helianthus annuus HOM05D003781 ORTHO05D004299 6.4e-35 152.5 126 53.2
TPR.G33838 Trifolium pratense HOM05D003781 ORTHO05D004299 2.1e-33 147.5 165 50.3
SMO343G0088 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 7.8e-33 145.6 250 37.2
AagrBONN_evm.TU.Sc2ySwM_228.4048 Anthoceros agrestis HOM05D003781 ORTHO05D004299 9.5e-31 138.7 448 26.8
SGA_v2.0_scaffold522G52710 Striga asiatica HOM05D003781 ORTHO05D004299 2.6e-28 130.6 107 60.7
Mapoly0033s0057 Marchantia polymorpha HOM05D003781 ORTHO05D004299 2.9e-27 127.1 180 40.0
PRCOL_00001992 Prasinoderma coloniale HOM05D003781 ORTHO05D004299 1.2e-25 121.7 289 28.0
ATR0772G001 Amborella trichopoda HOM05D003781 ORTHO05D004299 1.3e-24 118.2 161 46.6
Actinidia06046 Actinidia chinensis HOM05D003781 ORTHO05D004299 1.1e-23 115.2 149 44.3
AL1G32760 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 9.6e-23 112.1 133 46.6
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 2.6e-20 104.0 203 36.5
EL10Ac6g14086 Beta vulgaris HOM05D003781 ORTHO05D004299 1.1e-18 98.6 77 57.1
MCO12G060 Micromonas commoda HOM05D003781 ORTHO05D004299 5.4e-18 96.3 336 25.9
Lsat_1_v5_gn_1_27721 Lactuca sativa HOM05D003781 ORTHO05D004299 1.2e-17 95.1 110 42.7
TPR.G742 Trifolium pratense HOM05D003781 ORTHO05D004299 9.6e-15 85.5 89 53.9
CBR_g53498 Chara braunii HOM05D003781 ORTHO05D004299 2.1e-14 84.3 72 58.3
TAR629G3109 Trochodendron aralioides HOM05D003781 ORTHO05D004299 2.8e-14 84.0 102 51.0
Gorai.005G179000 Gossypium raimondii HOM05D003781 ORTHO05D004299 3.6e-14 83.6 95 42.1
Gohir.D04G105401 Gossypium hirsutum HOM05D003781 ORTHO05D004299 2.0e-12 77.8 86 43.0
CBR_g53714 Chara braunii HOM05D003781 ORTHO05D004299 5.8e-12 76.3 203 29.1
Nitab4.5_0001552g0060 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.7e-11 74.7 128 37.5
Cre12.g542400 Chlamydomonas reinhardtii HOM05D003781 ORTHO05D004299 4.9e-11 73.2 116 32.8
TPR.G38290 Trifolium pratense HOM05D010769 ORTHO05D011972 2.7e-09 67.4 53 54.7
TPR.G165 Trifolium pratense HOM05D003781 ORTHO05D004299 1.0e-08 65.5 54 51.9
Cfa022807 Carpinus fangiana HOM05D003781 ORTHO05D004299 3.7e-06 57.0 274 24.5
MD10G1054000 Malus domestica HOM05D003781 ORTHO05D004299 4.8e-06 56.6 152 32.9


User provided reference genes

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