Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.8e-170 602.4 287 100.0
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 1.1e-111 407.1 285 70.5
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 3.3e-76 289.3 293 57.0
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 7.9e-62 241.5 284 50.0
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 1.0e-61 241.1 297 48.8
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.8e-61 240.4 284 50.0
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 2.5e-60 236.5 282 48.6
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.8e-59 233.0 284 48.2
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.0e-56 224.6 280 45.4
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 3.2e-55 219.5 282 45.0
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 6.1e-54 215.3 284 43.3
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 7.9e-54 214.9 272 47.8
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.8e-53 213.8 284 43.3
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.1e-52 211.1 282 46.5
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 5.7e-52 208.8 283 45.9
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 4.5e-49 199.1 273 42.9
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 5.5e-47 192.2 278 41.7
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 2.7e-46 189.9 290 42.4
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 6.1e-38 162.2 274 39.1
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.5e-36 157.5 265 39.6
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 6.3e-35 152.1 278 38.5
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 9.1e-34 148.3 283 38.2
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 2.0e-33 147.1 146 53.4
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 5.9e-33 145.6 275 39.3
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.0e-32 142.5 296 35.1
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 6.5e-32 142.1 266 33.8
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 1.9e-31 140.6 282 37.6
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.6e-30 137.5 180 45.6
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 6.1e-30 135.6 282 32.6
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 8.0e-30 135.2 273 35.9
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.4e-29 134.4 142 48.6
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.8e-29 134.0 274 32.8
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.8e-29 134.0 274 32.8
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 1.8e-29 134.0 293 36.5
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 2.3e-29 133.7 268 34.7
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 4.0e-29 132.9 285 33.0
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 8.8e-29 131.7 282 32.3
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 8.8e-29 131.7 274 32.5
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 8.8e-29 131.7 291 32.3
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.5e-28 131.0 282 32.3
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 4.4e-28 129.4 279 31.9
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 5.7e-28 129.0 284 32.7
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 1.3e-27 127.9 272 34.2
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.7e-27 127.5 294 36.1
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 4.8e-27 125.9 293 32.1
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 3.1e-26 123.2 281 34.2
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 4.1e-26 122.9 284 31.0
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 4.1e-26 122.9 172 44.2
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 9.1e-26 121.7 276 32.2
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.2e-25 121.3 282 34.4
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 3.5e-25 119.8 280 31.8
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 1.3e-24 117.9 285 34.0
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.3e-24 117.9 149 44.3
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 3.3e-23 113.2 282 33.0
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 3.3e-23 113.2 292 29.8
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 5.5e-23 112.5 269 29.0
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 7.2e-23 112.1 281 31.0
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 2.1e-22 110.5 99 58.6
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 1.0e-21 108.2 277 30.7
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 1.4e-21 107.8 207 35.3
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.4e-21 107.8 286 29.7
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 4.0e-21 106.3 285 30.5
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 1.5e-20 104.4 274 29.6
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 2.0e-20 104.0 97 54.6
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 3.4e-20 103.2 92 53.3
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 4.4e-20 102.8 278 28.1
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 5.7e-20 102.4 240 35.0
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.7e-19 100.9 278 27.3
Oeu006273.1 Olea europaea HOM05D007097 ORTHO05D008131 3.7e-19 99.8 140 39.3
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 4.9e-19 99.4 280 30.7
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.1e-18 98.2 282 30.1
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 1.8e-18 97.4 85 57.6
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 2.4e-18 97.1 187 35.8
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 5.4e-18 95.9 182 34.6
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 5.4e-18 95.9 109 46.8
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 7.0e-18 95.5 187 33.2
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 9.2e-18 95.1 95 51.6
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 1.6e-17 94.4 278 32.0
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.6e-17 94.4 160 38.8
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 3.9e-16 89.7 295 31.5
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 8.6e-16 88.6 110 42.7
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 1.9e-15 87.4 112 42.0
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 1.6e-14 84.3 94 47.9
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 2.1e-14 84.0 105 43.8
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 2.8e-14 83.6 283 26.5
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 3.6e-14 83.2 94 46.8
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 1.8e-13 80.9 136 35.3
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 3.1e-13 80.1 270 27.0
Zm00001eb065580 Zea mays HOM05D007097 ORTHO05D008131 8.9e-13 78.6 287 25.1
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 2.6e-12 77.0 104 38.5
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.7e-11 74.3 58 53.4
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 1.7e-11 74.3 292 24.3
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 2.2e-11 73.9 101 39.6
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 3.7e-11 73.2 112 36.6
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 4.9e-11 72.8 282 26.2
Actinidia03892 Actinidia chinensis HOM05D007097 ORTHO05D008131 6.4e-11 72.4 126 38.1
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 6.4e-11 72.4 100 37.0
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 8.3e-11 72.0 282 26.2
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 1.1e-10 71.6 108 39.8
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.1e-10 71.6 87 42.5
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 1.4e-10 71.2 275 24.0
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.4e-10 71.2 99 36.4
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 3.2e-10 70.1 101 37.6
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 5.4e-10 69.3 100 37.0
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 6.0e-09 65.9 101 36.6
Zm00001eb434190 Zea mays HOM05D007097 ORTHO05D008131 7.8e-09 65.5 284 25.4
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 1.0e-08 65.1 234 28.6
Sc20g0006720 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.1e-07 61.6 94 38.3
Nn3g18010 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.6e-07 59.3 78 42.3
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 7.3e-07 58.9 96 36.5
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 3.6e-06 56.6 281 22.1


User provided reference genes

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