Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 9.6e-118 426.8 208 100.0
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 2.2e-53 213.0 176 63.1
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 2.9e-53 212.6 176 63.6
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.1e-52 210.7 176 61.4
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.2e-51 207.2 176 59.7
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.2e-51 207.2 174 60.9
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.6e-51 206.8 176 61.9
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.5e-51 205.7 176 60.8
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 3.5e-51 205.7 176 60.8
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 6.0e-51 204.9 200 55.0
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 6.0e-51 204.9 176 59.1
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.7e-50 203.4 176 58.0
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.7e-50 203.4 176 58.0
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 1.7e-50 203.4 176 58.0
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 2.3e-50 203.0 177 58.2
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 3.9e-50 202.2 176 58.5
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 3.9e-50 202.2 176 58.0
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 3.9e-50 202.2 175 61.1
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 6.6e-50 201.4 175 59.4
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 8.6e-50 201.1 114 80.7
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.1e-49 200.7 176 59.1
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 2.5e-49 199.5 176 58.0
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 2.5e-49 199.5 176 58.5
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 2.5e-49 199.5 176 58.5
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 3.3e-49 199.1 176 59.1
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 4.3e-49 198.7 113 81.4
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 4.3e-49 198.7 176 59.1
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 5.6e-49 198.4 196 57.7
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 1.2e-48 197.2 176 57.4
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 1.6e-48 196.8 176 57.4
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.6e-48 196.8 115 77.4
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 2.1e-48 196.4 176 56.2
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 4.7e-48 195.3 173 56.6
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 6.2e-48 194.9 175 57.7
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 8.0e-48 194.5 175 56.6
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 8.0e-48 194.5 176 56.8
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 1.8e-47 193.4 176 56.8
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 1.8e-47 193.4 176 56.8
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 1.8e-47 193.4 176 55.7
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 2.3e-47 193.0 180 56.7
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 3.1e-47 192.6 176 56.2
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 6.8e-47 191.4 176 56.8
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 6.8e-47 191.4 153 62.7
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.2e-46 190.7 126 70.6
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.5e-46 190.3 177 58.8
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 2.0e-46 189.9 176 55.7
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.0e-46 189.9 176 56.2
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.6e-46 189.5 114 74.6
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 3.4e-46 189.1 176 55.7
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 2.2e-45 186.4 171 54.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 2.9e-45 186.0 173 55.5
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 3.7e-45 185.7 176 53.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 8.3e-45 184.5 200 51.0
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.1e-44 184.1 176 54.5
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 4.1e-44 182.2 176 54.0
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 9.2e-44 181.0 176 53.4
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.6e-43 180.3 101 78.2
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 1.0e-42 177.6 224 46.9
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 1.3e-42 177.2 176 51.1
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 6.2e-40 168.3 114 66.7
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 8.1e-40 167.9 176 50.6
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 8.1e-40 167.9 176 50.6
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 8.1e-40 167.9 176 48.9
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.1e-39 167.5 114 66.7
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.4e-39 167.2 105 72.4
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.8e-39 166.8 105 72.4
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 4.0e-39 165.6 114 65.8
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 4.0e-39 165.6 114 64.0
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 6.8e-39 164.9 176 48.9
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 6.8e-39 164.9 114 64.9
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 1.5e-38 163.7 114 64.9
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 2.0e-38 163.3 114 65.8
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 2.6e-38 162.9 176 49.4
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 3.4e-38 162.5 98 76.5
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 1.3e-37 160.6 207 44.9
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 2.9e-37 159.5 96 70.8
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.1e-36 155.6 105 68.6
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 5.4e-36 155.2 110 62.7
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 7.1e-36 154.8 105 65.7
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 2.7e-35 152.9 171 48.0
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 2.7e-35 152.9 92 76.1
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 3.5e-35 152.5 129 54.3
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 1.2e-32 144.1 112 58.9
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 2.8e-32 142.9 143 51.7
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 4.4e-30 135.6 141 51.1
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 8.4e-29 131.3 118 49.2
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 4.6e-27 125.6 111 51.4
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 6.6e-26 121.7 176 44.3
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.6e-24 117.1 70 80.0
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.8e-23 113.6 113 47.8
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 2.4e-23 113.2 176 42.0
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.9e-20 103.6 104 46.2
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 7.8e-19 98.2 111 44.1
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 7.8e-19 98.2 111 44.1
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 1.5e-17 94.0 112 40.2
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.3e-13 80.9 106 43.4
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.2e-12 76.3 48 68.8
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 2.7e-11 73.2 68 54.4
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 1.8e-10 70.5 47 61.7
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 1.1e-09 67.8 96 37.5
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 2.1e-08 63.5 71 40.8
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 3.1e-07 59.7 40 57.5
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 3.4e-06 56.2 35 71.4
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 5.8e-06 55.5 36 63.9


User provided reference genes

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