Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06619 Striga asiatica HOM05D003477 ORTHO05D004043 8.1e-94 347.1 173 100.0
CSS0007946 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.8e-19 99.0 114 53.5
CSS0046932 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.8e-19 99.0 114 53.5
Actinidia00402 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.5e-18 96.3 112 51.8
Hma1.2p1_1023F.1_g249010 Hydrangea macrophylla HOM05D003477 ORTHO05D004043 5.5e-18 95.1 112 52.7
Actinidia34393 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.7e-17 92.8 112 50.9
Rhsim11G0156400 Rhododendron simsii HOM05D003477 ORTHO05D004043 2.7e-17 92.8 156 41.0
vmacro01991 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 3.6e-17 92.4 111 49.5
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 1.0e-16 90.9 115 54.8
Rhsim11G0157900 Rhododendron simsii HOM05D003477 ORTHO05D004043 1.4e-16 90.5 114 48.2
Dinv42204 Davidia involucrata HOM05D003477 ORTHO05D004043 2.3e-16 89.7 111 52.3
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 4.0e-16 89.0 115 51.3
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 5.2e-16 88.6 116 52.6
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 4.4e-15 85.5 116 51.7
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 4.4e-15 85.5 116 52.6
DCAR_029094 Daucus carota HOM05D003477 ORTHO05D004043 7.5e-15 84.7 111 50.5
ECA240G1244 Erigeron canadensis HOM05D003477 ORTHO05D004043 9.8e-15 84.3 114 51.8
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 4.8e-14 82.0 116 49.1
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 4.8e-14 82.0 117 50.4
Eucgr.I01090 Eucalyptus grandis HOM05D003477 ORTHO05D004043 8.3e-14 81.3 116 47.4
Oeu029533.3 Olea europaea HOM05D003477 ORTHO05D004043 1.1e-13 80.9 116 51.7
Aqoxy6G02834 Aquilegia oxysepala HOM05D003477 ORTHO05D004043 4.1e-13 79.0 121 47.9
DCAR_001659 Daucus carota HOM05D003477 ORTHO05D004043 7.0e-13 78.2 111 45.0
HanXRQChr03g0068771 Helianthus annuus HOM05D003477 ORTHO05D004043 9.1e-13 77.8 112 49.1
Lsat_1_v5_gn_9_111940 Lactuca sativa HOM05D003477 ORTHO05D004043 1.6e-12 77.0 111 45.9
Cc02_g19410 Coffea canephora HOM05D003477 ORTHO05D004043 2.7e-12 76.3 115 45.2
Peaxi162Scf00152g00313 Petunia axillaris HOM05D003477 ORTHO05D004043 2.7e-12 76.3 105 47.6
Sopen01g049690 Solanum pennellii HOM05D003477 ORTHO05D004043 2.7e-12 76.3 114 43.9
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 2.7e-12 76.3 114 43.9
Nitab4.5_0003699g0030 Nicotiana tabacum HOM05D003477 ORTHO05D004043 4.5e-12 75.5 113 45.1
VMungo0720G2427 Vigna mungo HOM05D003477 ORTHO05D004043 5.9e-12 75.1 115 47.0
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 1.0e-11 74.3 114 46.5
Rhsim05G0089200 Rhododendron simsii HOM05D003477 ORTHO05D004043 2.9e-11 72.8 113 47.8
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 2.9e-11 72.8 117 47.9
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 3.8e-11 72.4 114 43.9
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 3.8e-11 72.4 117 47.0
TAR381G0852 Trochodendron aralioides HOM05D003477 ORTHO05D004043 3.8e-11 72.4 117 47.0
Solyc01g107450.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 6.5e-11 71.6 114 42.1
GSVIVG01037899001 Vitis vinifera HOM05D003477 ORTHO05D004043 8.5e-11 71.2 103 46.6
HanXRQChr09g0251061 Helianthus annuus HOM05D003477 ORTHO05D004043 1.1e-10 70.9 111 45.9
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 1.5e-10 70.5 116 46.6
Ca_11060_v3 Cicer arietinum L. HOM05D003477 ORTHO05D004043 1.9e-10 70.1 116 47.4
Haze_10200 Corylus avellana HOM05D003477 ORTHO05D004043 1.9e-10 70.1 148 38.5
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 1.9e-10 70.1 115 43.5
Potri.001G298800 Populus trichocarpa HOM05D003477 ORTHO05D004043 1.9e-10 70.1 113 45.1
arahy.Tifrunner.gnm1.ann1.S3TCSS Arachis hypogaea HOM05D003477 ORTHO05D004043 5.5e-10 68.6 115 47.8
Glyma.20G130500 Glycine max HOM05D003477 ORTHO05D004043 5.5e-10 68.6 114 46.5
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 7.2e-10 68.2 116 47.4
Nn1g04659 Nelumbo nucifera HOM05D003477 ORTHO05D004043 7.2e-10 68.2 117 47.0
TWI79G1417 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 7.2e-10 68.2 116 44.8
Phvul.007G041500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 9.4e-10 67.8 115 42.6
unitig_22.g5195 Utricularia gibba HOM05D003477 ORTHO05D004043 1.2e-09 67.4 123 44.7
Duzib052G0507 Durio zibethinus HOM05D003477 ORTHO05D004043 1.6e-09 67.0 116 44.0
Thecc.02G111100 Theobroma cacao HOM05D003477 ORTHO05D004043 1.6e-09 67.0 119 44.5
Duzib132G0501 Durio zibethinus HOM05D003477 ORTHO05D004043 2.1e-09 66.6 119 45.4
FvH4_2g04800 Fragaria vesca HOM05D003477 ORTHO05D004043 2.7e-09 66.2 109 45.0
FAN20G0459 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.7e-09 66.2 109 44.0
Sabra16G0187400 Salix brachista HOM05D003477 ORTHO05D004043 2.7e-09 66.2 113 45.1
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 3.6e-09 65.9 119 44.5
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 4.7e-09 65.5 115 47.8
PSO675G8803 Papaver somniferum HOM05D003477 ORTHO05D004043 6.1e-09 65.1 115 42.6
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.0e-08 64.3 119 44.5
Gohir.A03G185500 Gossypium hirsutum HOM05D003477 ORTHO05D004043 1.0e-08 64.3 118 44.1
Gohir.D12G021600 Gossypium hirsutum HOM05D003477 ORTHO05D004043 1.0e-08 64.3 119 43.7
SalBow6G1437 Salvia bowleyana HOM05D003477 ORTHO05D004043 1.0e-08 64.3 88 48.9
CsaV3_3G018130 Cucumis sativus L. HOM05D003477 ORTHO05D004043 1.4e-08 63.9 116 45.7
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 1.4e-08 63.9 116 43.1
FAN24G0602 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.8e-08 63.5 109 44.0
Gohir.D02G206836 Gossypium hirsutum HOM05D003477 ORTHO05D004043 3.0e-08 62.8 118 43.2
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 3.0e-08 62.8 118 43.2
MD10G1099700 Malus domestica HOM05D003477 ORTHO05D004043 4.0e-08 62.4 116 43.1
PSO541G5514 Papaver somniferum HOM05D003477 ORTHO05D004043 4.0e-08 62.4 115 40.9
Potri.009G093400 Populus trichocarpa HOM05D003477 ORTHO05D004043 4.0e-08 62.4 113 42.5
FAN15G1392 Fragaria x ananassa HOM05D003477 ORTHO05D004043 8.8e-08 61.2 109 43.1
Gohir.A12G021300 Gossypium hirsutum HOM05D003477 ORTHO05D004043 8.8e-08 61.2 119 42.9
Psat6g216680 Pisum sativum HOM05D003477 ORTHO05D004043 1.2e-07 60.8 110 42.7
RcHm_v2.0_Chr6g0254531 Rosa chinensis HOM05D003477 ORTHO05D004043 1.2e-07 60.8 109 43.1
FAN27G0803 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.5e-07 60.5 109 45.0
Lalb_Chr02g0145231 Lupinus albus HOM05D003477 ORTHO05D004043 1.5e-07 60.5 110 41.8
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 1.5e-07 60.5 117 43.6
Atru.chr3.235 Acer truncatum HOM05D003477 ORTHO05D004043 2.0e-07 60.1 112 42.9
Cfa004605 Carpinus fangiana HOM05D003477 ORTHO05D004043 2.0e-07 60.1 126 36.5
DCAR_021977 Daucus carota HOM05D003477 ORTHO05D004043 4.4e-07 58.9 112 42.0
Manes.07G066700 Manihot esculenta HOM05D003477 ORTHO05D004043 4.4e-07 58.9 116 39.7
PSO675G3465 Papaver somniferum HOM05D003477 ORTHO05D004043 4.4e-07 58.9 120 40.0
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 4.4e-07 58.9 109 43.1
MD02G1179900 Malus domestica HOM05D003477 ORTHO05D004043 5.7e-07 58.5 118 41.5
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 5.7e-07 58.5 112 42.0
Dinv26882 Davidia involucrata HOM05D003477 ORTHO05D004043 7.5e-07 58.2 113 40.7
Manes.10G075200 Manihot esculenta HOM05D003477 ORTHO05D004043 7.5e-07 58.2 118 39.8
Sed0015852 Sechium edule HOM05D003477 ORTHO05D004043 9.8e-07 57.8 117 42.7
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 1.3e-06 57.4 115 40.0
Lalb_Chr21g0308261 Lupinus albus HOM05D003477 ORTHO05D004043 1.3e-06 57.4 114 39.5
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 1.3e-06 57.4 114 43.0
Sc16g0001450 Simmondsia chinensis HOM05D003477 ORTHO05D004043 1.3e-06 57.4 119 39.5
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.7e-06 57.0 115 40.9
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 1.7e-06 57.0 118 41.5
Lj5g0009419 Lotus japonicus HOM05D003477 ORTHO05D004043 2.2e-06 56.6 115 40.0
Medtr1g107085 Medicago truncatula HOM05D003477 ORTHO05D004043 2.2e-06 56.6 110 40.9
Actinidia16453 Actinidia chinensis HOM05D003477 ORTHO05D004043 3.7e-06 55.8 116 40.5
Actinidia21247 Actinidia chinensis HOM05D003477 ORTHO05D004043 3.7e-06 55.8 116 40.5
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 3.7e-06 55.8 115 41.7
Prupe.6G226300 Prunus persica HOM05D003477 ORTHO05D004043 4.9e-06 55.5 118 41.5


User provided reference genes

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