Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06612 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-88 327.4 163 100.0
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-25 119.0 68 86.8
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-15 86.3 68 61.8
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-14 83.2 73 57.5
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-14 82.8 73 53.4
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-13 79.3 105 46.7
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-11 72.0 66 51.5
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-10 70.5 69 47.8
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-10 69.7 68 50.0
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-10 68.9 66 48.5
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-09 67.0 71 46.5
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-09 66.6 66 48.5
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-09 66.2 73 43.8
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 4.4e-09 65.5 68 45.6
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 4.4e-09 65.5 68 45.6
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 5.8e-09 65.1 66 45.5
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 5.8e-09 65.1 140 35.7
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-09 64.7 73 43.8
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 9.8e-09 64.3 66 48.5
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 6.4e-08 61.6 65 43.1
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 1.9e-07 60.1 71 39.4
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 3.2e-07 59.3 66 43.9
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 5.4e-07 58.5 62 51.6
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 5.4e-07 58.5 66 40.9
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 5.4e-07 58.5 66 40.9
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 5.4e-07 58.5 66 40.9
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.2e-06 57.4 65 47.7
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 2.1e-06 56.6 67 35.8
Cc09_g07530 Coffea canephora HOM05D006612 ORTHO05D009014 3.5e-06 55.8 73 41.1
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 4.6e-06 55.5 72 38.9
Mapoly0109s0044 Marchantia polymorpha HOM05D000824 ORTHO05D003555 4.6e-06 55.5 91 29.7
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 6.0e-06 55.1 79 34.2
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 7.8e-06 54.7 65 38.5
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 7.8e-06 54.7 66 39.4
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 7.8e-06 54.7 63 44.4


User provided reference genes

Program Settings