Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06611 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-137 491.9 278 100.0
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-91 340.1 294 70.4
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-28 130.6 259 36.3
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-25 121.3 261 34.5
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-25 120.6 251 35.1
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-24 117.5 176 39.2
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-23 112.5 255 33.3
SGA_v2.0_scaffold188G40332 Striga asiatica HOM05D006612 ORTHO05D009014 4.5e-22 109.4 133 48.1
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.0e-21 108.2 186 38.7
SGA_v2.0_scaffold3598G54367 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-14 84.3 89 48.3
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-14 83.2 150 40.0
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-14 82.8 183 33.9
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-12 78.2 300 26.3
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 1.9e-12 77.4 296 25.7
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-11 72.8 183 27.9
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-10 70.9 252 21.8
SGA_v2.0_scaffold116G32265 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-10 70.5 119 37.8
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-10 69.3 246 23.2
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 4.4e-09 66.2 158 25.3
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-08 63.9 315 24.8
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-08 63.2 171 26.9
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-07 61.2 246 21.5
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 3.2e-07 60.1 170 26.5
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-07 59.3 220 21.8
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-06 57.8 227 20.7
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-06 57.8 227 20.7
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-06 57.0 129 30.2
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-06 56.6 246 21.1
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-06 56.2 158 26.6


User provided reference genes

Program Settings